RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 C8orf17Q9NRJ1 99 aa6.52□□□□□ -1.37
RCCD1-209ENST00000557750 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
RCCD1-209ENST00000557750 A6NED7 52 aa6.51□□□□□ -1.37
RCCD1-209ENST00000557750 COA5Q86WW8 74 aa6.51□□□□□ -1.37
RCCD1-209ENST00000557750 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
RCCD1-209ENST00000557750 KRTAP4-1Q9BYQ7 146 aa6.5□□□□□ -1.37
RCCD1-209ENST00000557750 LINC01558Q9Y6Z2 57 aa6.49□□□□□ -1.37
RCCD1-209ENST00000557750 MMP24-AS1A0A0U1RRL7 71 aa6.47□□□□□ -1.37
RCCD1-209ENST00000557750 SPTSSBQ8NFR3 76 aa6.46□□□□□ -1.37
RCCD1-209ENST00000557750 A6NN06 94 aa6.44□□□□□ -1.38
RCCD1-209ENST00000557750 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
RCCD1-209ENST00000557750 MRPL34Q9BQ48 92 aaKnown RBP6.44□□□□□ -1.38
RCCD1-209ENST00000557750 LCA10Q71F78 164 aa6.43□□□□□ -1.38
RCCD1-209ENST00000557750 RBM12B-AS1Q9P1G2 102 aa6.42□□□□□ -1.38
RCCD1-209ENST00000557750 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
RCCD1-209ENST00000557750 A8MU10 97 aa6.37□□□□□ -1.39
RCCD1-209ENST00000557750 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
RCCD1-209ENST00000557750 MT1HP80294 61 aa6.32□□□□□ -1.4
RCCD1-209ENST00000557750 HRES1P13985 223 aa6.31□□□□□ -1.4
RCCD1-209ENST00000557750 SPINK7P58062 85 aa6.29□□□□□ -1.4
RCCD1-209ENST00000557750 COX6B2Q6YFQ2 88 aa6.29□□□□□ -1.4
RCCD1-209ENST00000557750 ACYP2P14621 99 aa6.28□□□□□ -1.4
RCCD1-209ENST00000557750 Q5W150 140 aa6.27□□□□□ -1.41
RCCD1-209ENST00000557750 LORP23490 312 aaPredicted RBP6.26□□□□□ -1.41
RCCD1-209ENST00000557750 KRTAP10-6P60371 365 aaPredicted RBP6.24□□□□□ -1.41
RCCD1-209ENST00000557750 IGKV2D-30A0A075B6S6 120 aa6.23□□□□□ -1.41
RCCD1-209ENST00000557750 IGKV2-30P06310 120 aa6.23□□□□□ -1.41
RCCD1-209ENST00000557750 FLGP20930 4061 aaPredicted RBP6.21□□□□□ -1.42
RCCD1-209ENST00000557750 DMAC1Q96GE9 116 aa6.19□□□□□ -1.42
RCCD1-209ENST00000557750 A0A1B0GU69 56 aa6.17□□□□□ -1.42
RCCD1-209ENST00000557750 M0R2T5 61 aa6.17□□□□□ -1.42
RCCD1-209ENST00000557750 SPATA8Q6RVD6 105 aa6.17□□□□□ -1.42
RCCD1-209ENST00000557750 UQCR11O14957 56 aa6.12□□□□□ -1.43
RCCD1-209ENST00000557750 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
RCCD1-209ENST00000557750 USH2AO75445 5202 aa6.11□□□□□ -1.43
RCCD1-209ENST00000557750 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
RCCD1-209ENST00000557750 KRTAP9-7A8MTY7 169 aa6.1□□□□□ -1.43
RCCD1-209ENST00000557750 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
RCCD1-209ENST00000557750 MIR22HGQ0VDD5 57 aa6.1□□□□□ -1.43
RCCD1-209ENST00000557750 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
RCCD1-209ENST00000557750 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
RCCD1-209ENST00000557750 FCGBPQ9Y6R7 5405 aaPredicted RBP6□□□□□ -1.45
RCCD1-209ENST00000557750 KRTAP3-1Q9BYR8 98 aa5.96□□□□□ -1.46
RCCD1-209ENST00000557750 ADM2Q7Z4H4 148 aa5.95□□□□□ -1.46
RCCD1-209ENST00000557750 KRTAP9-8Q9BYQ0 159 aa5.94□□□□□ -1.46
RCCD1-209ENST00000557750 SYNE2Q8WXH0 6885 aaKnown RBP5.9□□□□□ -1.46
RCCD1-209ENST00000557750 CSAG1Q6PB30 78 aa5.9□□□□□ -1.47
RCCD1-209ENST00000557750 S4R3F8 94 aa5.9□□□□□ -1.47
RCCD1-209ENST00000557750 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
RCCD1-209ENST00000557750 H3BS24 57 aa5.85□□□□□ -1.47
RCCD1-209ENST00000557750 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
RCCD1-209ENST00000557750 MT2AP02795 61 aa5.83□□□□□ -1.48
RCCD1-209ENST00000557750 LCE2BO14633 110 aa5.82□□□□□ -1.48
RCCD1-209ENST00000557750 MT1FP04733 61 aa5.79□□□□□ -1.48
RCCD1-209ENST00000557750 KRTAP10-10P60014 251 aa5.79□□□□□ -1.48
RCCD1-209ENST00000557750 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
RCCD1-209ENST00000557750 K7ERS5 55 aa5.79□□□□□ -1.48
RCCD1-209ENST00000557750 KRTAP3-3Q9BYR6 98 aa5.78□□□□□ -1.48
RCCD1-209ENST00000557750 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
RCCD1-209ENST00000557750 A0A1B0GU33 70 aa5.74□□□□□ -1.49
RCCD1-209ENST00000557750 H0YAA0 97 aa5.72□□□□□ -1.49
RCCD1-209ENST00000557750 ROMO1P60602 79 aa5.7□□□□□ -1.5
RCCD1-209ENST00000557750 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
RCCD1-209ENST00000557750 NEBP20929 6669 aa5.59□□□□□ -1.51
RCCD1-209ENST00000557750 KRTAP6-3Q3LI67 103 aa5.58□□□□□ -1.52
RCCD1-209ENST00000557750 CRIPTQ9P021 101 aa5.52□□□□□ -1.53
RCCD1-209ENST00000557750 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
RCCD1-209ENST00000557750 P0C880 135 aa5.48□□□□□ -1.53
RCCD1-209ENST00000557750 KRTAP3-2Q9BYR7 98 aa5.47□□□□□ -1.53
RCCD1-209ENST00000557750 MUC12Q9UKN1 5478 aa5.47□□□□□ -1.53
RCCD1-209ENST00000557750 SPINT4Q6UDR6 99 aa5.44□□□□□ -1.54
RCCD1-209ENST00000557750 R4GN34 69 aa5.43□□□□□ -1.54
RCCD1-209ENST00000557750 KRTAP19-8Q3LI54 63 aa5.4□□□□□ -1.54
RCCD1-209ENST00000557750 M0QZ58 72 aa5.4□□□□□ -1.55
RCCD1-209ENST00000557750 MT1BP07438 61 aa5.38□□□□□ -1.55
RCCD1-209ENST00000557750 KRTAP20-1Q3LI63 56 aa5.32□□□□□ -1.56
RCCD1-209ENST00000557750 MDN1Q9NU22 5596 aa5.31□□□□□ -1.56
RCCD1-209ENST00000557750 A0A0D9SG42 100 aa5.31□□□□□ -1.56
RCCD1-209ENST00000557750 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
RCCD1-209ENST00000557750 KRTAP13-4Q3LI77 160 aa5.28□□□□□ -1.56
RCCD1-209ENST00000557750 PLAC4Q8WY50 150 aa5.27□□□□□ -1.57
RCCD1-209ENST00000557750 KMT2DO14686 5537 aa5.26□□□□□ -1.57
RCCD1-209ENST00000557750 NDUFAF8A1L188 74 aa5.24□□□□□ -1.57
RCCD1-209ENST00000557750 KRTAP10-5P60370 271 aa5.2□□□□□ -1.58
RCCD1-209ENST00000557750 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
RCCD1-209ENST00000557750 KRTAP5-9P26371 169 aa5.18□□□□□ -1.58
RCCD1-209ENST00000557750 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
RCCD1-209ENST00000557750 KRTAP12-2P59991 146 aa5.18□□□□□ -1.58
RCCD1-209ENST00000557750 PRO2289Q9P1D8 64 aa5.15□□□□□ -1.59
RCCD1-209ENST00000557750 MT1XP80297 61 aa5.12□□□□□ -1.59
RCCD1-209ENST00000557750 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
RCCD1-209ENST00000557750 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
RCCD1-209ENST00000557750 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
RCCD1-209ENST00000557750 SPRR2EP22531 72 aa4.97□□□□□ -1.61
RCCD1-209ENST00000557750 SPRR2BP35325 72 aa4.97□□□□□ -1.61
RCCD1-209ENST00000557750 SPRR2AP35326 72 aa4.97□□□□□ -1.61
RCCD1-209ENST00000557750 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
RCCD1-209ENST00000557750 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.61
RCCD1-209ENST00000557750 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
RCCD1-209ENST00000557750 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms