RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
APEX1-220ENST00000557592 MT1FP04733 61 aa5.38□□□□□ -1.55
APEX1-220ENST00000557592 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
APEX1-220ENST00000557592 KRTAP9-6A0A140TA67 174 aa5.36□□□□□ -1.55
APEX1-220ENST00000557592 DMAC1Q96GE9 116 aa5.36□□□□□ -1.55
APEX1-220ENST00000557592 KRTAP3-3Q9BYR6 98 aa5.36□□□□□ -1.55
APEX1-220ENST00000557592 COX7CP15954 63 aa5.35□□□□□ -1.55
APEX1-220ENST00000557592 NDUFC1O43677 76 aa5.34□□□□□ -1.55
APEX1-220ENST00000557592 ANAPC13Q9BS18 74 aa5.32□□□□□ -1.56
APEX1-220ENST00000557592 ACYP2P14621 99 aa5.29□□□□□ -1.56
APEX1-220ENST00000557592 FSIP2Q5CZC0 6907 aa5.28□□□□□ -1.56
APEX1-220ENST00000557592 SPANXA2-OT1Q8N9U9 137 aa5.28□□□□□ -1.56
APEX1-220ENST00000557592 KRTAP9-3Q9BYQ3 159 aa5.28□□□□□ -1.56
APEX1-220ENST00000557592 CYSTM1Q9H1C7 97 aa5.24□□□□□ -1.57
APEX1-220ENST00000557592 CRCT1Q9UGL9 99 aa5.24□□□□□ -1.57
APEX1-220ENST00000557592 CHKB-CPT1BH3BT56 60 aa5.21□□□□□ -1.58
APEX1-220ENST00000557592 H7BZZ5 65 aa5.21□□□□□ -1.58
APEX1-220ENST00000557592 USH2AO75445 5202 aa5.21□□□□□ -1.58
APEX1-220ENST00000557592 H0YAA0 97 aa5.2□□□□□ -1.58
APEX1-220ENST00000557592 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
APEX1-220ENST00000557592 LCE2BO14633 110 aa5.2□□□□□ -1.58
APEX1-220ENST00000557592 ADM2Q7Z4H4 148 aa5.19□□□□□ -1.58
APEX1-220ENST00000557592 SPTSSBQ8NFR3 76 aa5.19□□□□□ -1.58
APEX1-220ENST00000557592 COA5Q86WW8 74 aa5.14□□□□□ -1.59
APEX1-220ENST00000557592 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
APEX1-220ENST00000557592 CRIPTQ9P021 101 aa5.12□□□□□ -1.59
APEX1-220ENST00000557592 SSPOA2VEC9 5147 aa5.11□□□□□ -1.59
APEX1-220ENST00000557592 SPRR2GQ9BYE4 73 aa5.1□□□□□ -1.59
APEX1-220ENST00000557592 P0C880 135 aa5.09□□□□□ -1.59
APEX1-220ENST00000557592 RPS28P62857 69 aaKnown RBP5.09□□□□□ -1.59
APEX1-220ENST00000557592 KRTAP3-2Q9BYR7 98 aa5.07□□□□□ -1.6
APEX1-220ENST00000557592 ATP5EP56381 51 aaPredicted RBP5.04□□□□□ -1.6
APEX1-220ENST00000557592 TMEM258P61165 79 aa5.03□□□□□ -1.6
APEX1-220ENST00000557592 Q5VV11 94 aa5.03□□□□□ -1.6
APEX1-220ENST00000557592 R4GN34 69 aa5.03□□□□□ -1.6
APEX1-220ENST00000557592 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
APEX1-220ENST00000557592 M0QZ58 72 aa5.01□□□□□ -1.61
APEX1-220ENST00000557592 MT1BP07438 61 aa5□□□□□ -1.61
APEX1-220ENST00000557592 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
APEX1-220ENST00000557592 SEC61GP60059 68 aa4.96□□□□□ -1.62
APEX1-220ENST00000557592 FCGBPQ9Y6R7 5405 aaPredicted RBP4.95□□□□□ -1.62
APEX1-220ENST00000557592 LINC01554Q52M75 96 aa4.94□□□□□ -1.62
APEX1-220ENST00000557592 SERP1Q9Y6X1 66 aa4.94□□□□□ -1.62
APEX1-220ENST00000557592 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
APEX1-220ENST00000557592 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
APEX1-220ENST00000557592 A0A1B0GU69 56 aa4.87□□□□□ -1.63
APEX1-220ENST00000557592 A6NN06 94 aa4.86□□□□□ -1.63
APEX1-220ENST00000557592 KRTAP13-4Q3LI77 160 aa4.86□□□□□ -1.63
APEX1-220ENST00000557592 A0A1B0GU33 70 aa4.84□□□□□ -1.63
APEX1-220ENST00000557592 KRTAP10-5P60370 271 aa4.83□□□□□ -1.64
APEX1-220ENST00000557592 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
APEX1-220ENST00000557592 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
APEX1-220ENST00000557592 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
APEX1-220ENST00000557592 SMIM26A0A096LP01 95 aa4.8□□□□□ -1.64
APEX1-220ENST00000557592 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
APEX1-220ENST00000557592 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
APEX1-220ENST00000557592 A0A0D9SG42 100 aa4.77□□□□□ -1.65
APEX1-220ENST00000557592 PRO2289Q9P1D8 64 aa4.77□□□□□ -1.65
APEX1-220ENST00000557592 MACF1Q9UPN3 7388 aaKnown RBP4.76□□□□□ -1.65
APEX1-220ENST00000557592 MT1XP80297 61 aa4.75□□□□□ -1.65
APEX1-220ENST00000557592 V9GYY9 64 aa4.69□□□□□ -1.66
APEX1-220ENST00000557592 SPINT4Q6UDR6 99 aa4.68□□□□□ -1.66
APEX1-220ENST00000557592 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
APEX1-220ENST00000557592 A8MU10 97 aa4.67□□□□□ -1.66
APEX1-220ENST00000557592 Q1T7F1 81 aa4.67□□□□□ -1.66
APEX1-220ENST00000557592 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
APEX1-220ENST00000557592 KRTAP12-1P59990 96 aa4.65□□□□□ -1.67
APEX1-220ENST00000557592 UQCR11O14957 56 aa4.64□□□□□ -1.67
APEX1-220ENST00000557592 PSPHP1O15172 72 aa4.64□□□□□ -1.67
APEX1-220ENST00000557592 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
APEX1-220ENST00000557592 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
APEX1-220ENST00000557592 MIR22HGQ0VDD5 57 aa4.57□□□□□ -1.68
APEX1-220ENST00000557592 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
APEX1-220ENST00000557592 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
APEX1-220ENST00000557592 KMT2DO14686 5537 aa4.52□□□□□ -1.69
APEX1-220ENST00000557592 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
APEX1-220ENST00000557592 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
APEX1-220ENST00000557592 A6NED7 52 aa4.5□□□□□ -1.69
APEX1-220ENST00000557592 KRTAP8-1Q8IUC2 63 aa4.47□□□□□ -1.69
APEX1-220ENST00000557592 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
APEX1-220ENST00000557592 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
APEX1-220ENST00000557592 K7ERS5 55 aa4.44□□□□□ -1.7
APEX1-220ENST00000557592 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
APEX1-220ENST00000557592 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
APEX1-220ENST00000557592 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
APEX1-220ENST00000557592 SPRR2FQ96RM1 72 aa4.4□□□□□ -1.71
APEX1-220ENST00000557592 MUC12Q9UKN1 5478 aa4.4□□□□□ -1.71
APEX1-220ENST00000557592 NEBP20929 6669 aa4.38□□□□□ -1.71
APEX1-220ENST00000557592 TNP1P09430 55 aa4.36□□□□□ -1.71
APEX1-220ENST00000557592 CDC42SE1Q9NRR8 79 aa4.35□□□□□ -1.71
APEX1-220ENST00000557592 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
APEX1-220ENST00000557592 SPRR2EP22531 72 aa4.28□□□□□ -1.72
APEX1-220ENST00000557592 SPRR2BP35325 72 aa4.28□□□□□ -1.72
APEX1-220ENST00000557592 SPRR2AP35326 72 aa4.28□□□□□ -1.72
APEX1-220ENST00000557592 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
APEX1-220ENST00000557592 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
APEX1-220ENST00000557592 KRTAP19-7Q3SYF9 63 aa4.24□□□□□ -1.73
APEX1-220ENST00000557592 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
APEX1-220ENST00000557592 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
APEX1-220ENST00000557592 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms