RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 RPS29P62273 56 aaKnown RBP4.22□□□□□ -1.73
MTHFD1-215ENST00000557370 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
MTHFD1-215ENST00000557370 PRR26Q8N8Z3 221 aa4.22□□□□□ -1.73
MTHFD1-215ENST00000557370 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
MTHFD1-215ENST00000557370 SPINK1P00995 79 aa4.21□□□□□ -1.74
MTHFD1-215ENST00000557370 SPAG11AQ6PDA7 123 aa4.21□□□□□ -1.74
MTHFD1-215ENST00000557370 IGKV2-30P06310 120 aa4.2□□□□□ -1.74
MTHFD1-215ENST00000557370 ANAPC11Q9NYG5 84 aa4.2□□□□□ -1.74
MTHFD1-215ENST00000557370 A0A087X002 238 aa4.19□□□□□ -1.74
MTHFD1-215ENST00000557370 NOTCH2NLQ7Z3S9 236 aa4.19□□□□□ -1.74
MTHFD1-215ENST00000557370 Q5W150 140 aa4.18□□□□□ -1.74
MTHFD1-215ENST00000557370 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
MTHFD1-215ENST00000557370 LRP2P98164 4655 aa4.16□□□□□ -1.74
MTHFD1-215ENST00000557370 PKHD1L1Q86WI1 4243 aa4.15□□□□□ -1.74
MTHFD1-215ENST00000557370 KRTAP13-2Q52LG2 175 aa4.15□□□□□ -1.75
MTHFD1-215ENST00000557370 LCA10Q71F78 164 aa4.15□□□□□ -1.75
MTHFD1-215ENST00000557370 SPTSSBQ8NFR3 76 aa4.15□□□□□ -1.75
MTHFD1-215ENST00000557370 KRTAP16-1A8MUX0 517 aa4.14□□□□□ -1.75
MTHFD1-215ENST00000557370 TYMSOSQ8TAI1 123 aa4.14□□□□□ -1.75
MTHFD1-215ENST00000557370 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
MTHFD1-215ENST00000557370 A0A1B0GU69 56 aa4.13□□□□□ -1.75
MTHFD1-215ENST00000557370 KRTAP1-4P0C5Y4 121 aa4.13□□□□□ -1.75
MTHFD1-215ENST00000557370 DNAH8Q96JB1 4490 aa4.13□□□□□ -1.75
MTHFD1-215ENST00000557370 SEC61GP60059 68 aa4.12□□□□□ -1.75
MTHFD1-215ENST00000557370 LRP1Q07954 4544 aaKnown RBP4.12□□□□□ -1.75
MTHFD1-215ENST00000557370 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
MTHFD1-215ENST00000557370 A6NN06 94 aa4.11□□□□□ -1.75
MTHFD1-215ENST00000557370 C7orf65Q6ZTY9 151 aa4.11□□□□□ -1.75
MTHFD1-215ENST00000557370 UQCR11O14957 56 aa4.1□□□□□ -1.75
MTHFD1-215ENST00000557370 LINC00304Q8N9R0 145 aa4.1□□□□□ -1.75
MTHFD1-215ENST00000557370 SPINK7P58062 85 aa4.08□□□□□ -1.76
MTHFD1-215ENST00000557370 SPATA8Q6RVD6 105 aa4.08□□□□□ -1.76
MTHFD1-215ENST00000557370 MUC2Q02817 5179 aa4.08□□□□□ -1.76
MTHFD1-215ENST00000557370 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
MTHFD1-215ENST00000557370 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
MTHFD1-215ENST00000557370 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
MTHFD1-215ENST00000557370 MIR22HGQ0VDD5 57 aa4.04□□□□□ -1.76
MTHFD1-215ENST00000557370 A8MUU9 505 aa4.03□□□□□ -1.76
MTHFD1-215ENST00000557370 C20orf166-AS1Q96NR2 134 aa4.03□□□□□ -1.76
MTHFD1-215ENST00000557370 A8MU10 97 aa4.02□□□□□ -1.77
MTHFD1-215ENST00000557370 KRTAP10-4P60372 401 aaPredicted RBP4.02□□□□□ -1.77
MTHFD1-215ENST00000557370 RETNLBQ9BQ08 111 aa4.02□□□□□ -1.77
MTHFD1-215ENST00000557370 TNXBP22105 4242 aa4□□□□□ -1.77
MTHFD1-215ENST00000557370 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
MTHFD1-215ENST00000557370 RBM12B-AS1Q9P1G2 102 aa3.98□□□□□ -1.77
MTHFD1-215ENST00000557370 H3BS24 57 aa3.94□□□□□ -1.78
MTHFD1-215ENST00000557370 K7ERS5 55 aa3.92□□□□□ -1.78
MTHFD1-215ENST00000557370 COX6B2Q6YFQ2 88 aa3.91□□□□□ -1.78
MTHFD1-215ENST00000557370 A0A1B0GU33 70 aa3.9□□□□□ -1.79
MTHFD1-215ENST00000557370 LPAP08519 4548 aa3.89□□□□□ -1.79
MTHFD1-215ENST00000557370 C9orf92A6NGG3 77 aa3.88□□□□□ -1.79
MTHFD1-215ENST00000557370 H1FX-AS1Q4G0G2 97 aa3.87□□□□□ -1.79
MTHFD1-215ENST00000557370 LINC01554Q52M75 96 aa3.84□□□□□ -1.79
MTHFD1-215ENST00000557370 KRTAP3-1Q9BYR8 98 aa3.84□□□□□ -1.79
MTHFD1-215ENST00000557370 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
MTHFD1-215ENST00000557370 RPL37P61927 97 aaKnown RBP3.83□□□□□ -1.8
MTHFD1-215ENST00000557370 H0YAA0 97 aa3.81□□□□□ -1.8
MTHFD1-215ENST00000557370 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
MTHFD1-215ENST00000557370 CSAG1Q6PB30 78 aa3.76□□□□□ -1.81
MTHFD1-215ENST00000557370 S4R3F8 94 aa3.76□□□□□ -1.81
MTHFD1-215ENST00000557370 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
MTHFD1-215ENST00000557370 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
MTHFD1-215ENST00000557370 ROMO1P60602 79 aa3.72□□□□□ -1.81
MTHFD1-215ENST00000557370 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
MTHFD1-215ENST00000557370 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
MTHFD1-215ENST00000557370 M0QZ58 72 aa3.68□□□□□ -1.82
MTHFD1-215ENST00000557370 SEC61BP60468 96 aaKnown RBP3.6□□□□□ -1.83
MTHFD1-215ENST00000557370 CRIPTQ9P021 101 aa3.6□□□□□ -1.83
MTHFD1-215ENST00000557370 A0A0D9SG42 100 aa3.57□□□□□ -1.84
MTHFD1-215ENST00000557370 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
MTHFD1-215ENST00000557370 M0R2T5 61 aa3.56□□□□□ -1.84
MTHFD1-215ENST00000557370 P0C880 135 aa3.56□□□□□ -1.84
MTHFD1-215ENST00000557370 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
MTHFD1-215ENST00000557370 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
MTHFD1-215ENST00000557370 MT1HP80294 61 aa3.52□□□□□ -1.85
MTHFD1-215ENST00000557370 SPINT4Q6UDR6 99 aa3.51□□□□□ -1.85
MTHFD1-215ENST00000557370 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
MTHFD1-215ENST00000557370 KRTAP12-2P59991 146 aa3.49□□□□□ -1.85
MTHFD1-215ENST00000557370 R4GN34 69 aa3.49□□□□□ -1.85
MTHFD1-215ENST00000557370 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
MTHFD1-215ENST00000557370 KRTAP4-1Q9BYQ7 146 aa3.48□□□□□ -1.85
MTHFD1-215ENST00000557370 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
MTHFD1-215ENST00000557370 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
MTHFD1-215ENST00000557370 SSPOA2VEC9 5147 aa3.46□□□□□ -1.86
MTHFD1-215ENST00000557370 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
MTHFD1-215ENST00000557370 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
MTHFD1-215ENST00000557370 USH2AO75445 5202 aa3.41□□□□□ -1.86
MTHFD1-215ENST00000557370 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
MTHFD1-215ENST00000557370 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
MTHFD1-215ENST00000557370 C10orf95Q9H7T3 257 aa3.37□□□□□ -1.87
MTHFD1-215ENST00000557370 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
MTHFD1-215ENST00000557370 NEBP20929 6669 aa3.34□□□□□ -1.87
MTHFD1-215ENST00000557370 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
MTHFD1-215ENST00000557370 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
MTHFD1-215ENST00000557370 PLAC4Q8WY50 150 aa3.28□□□□□ -1.88
MTHFD1-215ENST00000557370 TNP1P09430 55 aa3.25□□□□□ -1.89
MTHFD1-215ENST00000557370 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
MTHFD1-215ENST00000557370 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
MTHFD1-215ENST00000557370 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
MTHFD1-215ENST00000557370 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms