RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 SERP2Q8N6R1 65 aa9.75□□□□□ -0.85
SEC23A-213ENST00000557280 SNURFQ9Y675 71 aa9.75□□□□□ -0.85
SEC23A-213ENST00000557280 DMAC1Q96GE9 116 aa9.72□□□□□ -0.85
SEC23A-213ENST00000557280 LCE2BO14633 110 aa9.71□□□□□ -0.86
SEC23A-213ENST00000557280 CRCT1Q9UGL9 99 aa9.69□□□□□ -0.86
SEC23A-213ENST00000557280 FSIP2Q5CZC0 6907 aa9.69□□□□□ -0.86
SEC23A-213ENST00000557280 USH2AO75445 5202 aa9.69□□□□□ -0.86
SEC23A-213ENST00000557280 C20orf197Q8N268 126 aa9.68□□□□□ -0.86
SEC23A-213ENST00000557280 NDUFC1O43677 76 aa9.66□□□□□ -0.86
SEC23A-213ENST00000557280 COX7CP15954 63 aa9.56□□□□□ -0.88
SEC23A-213ENST00000557280 KRTAP19-1Q8IUB9 90 aa9.52□□□□□ -0.89
SEC23A-213ENST00000557280 SSPOA2VEC9 5147 aa9.51□□□□□ -0.89
SEC23A-213ENST00000557280 ACYP2P14621 99 aa9.5□□□□□ -0.89
SEC23A-213ENST00000557280 H0YAA0 97 aa9.48□□□□□ -0.89
SEC23A-213ENST00000557280 SPANXA2-OT1Q8N9U9 137 aa9.48□□□□□ -0.89
SEC23A-213ENST00000557280 CYSTM1Q9H1C7 97 aa9.48□□□□□ -0.89
SEC23A-213ENST00000557280 ADM2Q7Z4H4 148 aa9.44□□□□□ -0.9
SEC23A-213ENST00000557280 ANAPC13Q9BS18 74 aa9.44□□□□□ -0.9
SEC23A-213ENST00000557280 SPRR2GQ9BYE4 73 aa9.41□□□□□ -0.9
SEC23A-213ENST00000557280 H7BZZ5 65 aa9.36□□□□□ -0.91
SEC23A-213ENST00000557280 CHKB-CPT1BH3BT56 60 aa9.34□□□□□ -0.91
SEC23A-213ENST00000557280 P0C880 135 aa9.32□□□□□ -0.92
SEC23A-213ENST00000557280 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
SEC23A-213ENST00000557280 CCDC179H3BU77 68 aa9.31□□□□□ -0.92
SEC23A-213ENST00000557280 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
SEC23A-213ENST00000557280 MT1BP07438 61 aa9.29□□□□□ -0.92
SEC23A-213ENST00000557280 KRTAP19-8Q3LI54 63 aa9.29□□□□□ -0.92
SEC23A-213ENST00000557280 SPTSSBQ8NFR3 76 aa9.26□□□□□ -0.93
SEC23A-213ENST00000557280 KRTAP19-6Q3LI70 58 aa9.25□□□□□ -0.93
SEC23A-213ENST00000557280 COA5Q86WW8 74 aa9.25□□□□□ -0.93
SEC23A-213ENST00000557280 Q5VV11 94 aa9.23□□□□□ -0.93
SEC23A-213ENST00000557280 FCGBPQ9Y6R7 5405 aaPredicted RBP9.23□□□□□ -0.93
SEC23A-213ENST00000557280 R4GN34 69 aa9.12□□□□□ -0.95
SEC23A-213ENST00000557280 M0QZ58 72 aa9.1□□□□□ -0.95
SEC23A-213ENST00000557280 KRTAP9-1A8MXZ3 250 aaPredicted RBP9□□□□□ -0.97
SEC23A-213ENST00000557280 LINC01554Q52M75 96 aa8.96□□□□□ -0.98
SEC23A-213ENST00000557280 A6NN06 94 aa8.95□□□□□ -0.98
SEC23A-213ENST00000557280 ATP5EP56381 51 aaPredicted RBP8.95□□□□□ -0.98
SEC23A-213ENST00000557280 KRTAP10-5P60370 271 aa8.95□□□□□ -0.98
SEC23A-213ENST00000557280 KRTAP9-7A8MTY7 169 aa8.92□□□□□ -0.98
SEC23A-213ENST00000557280 KRTAP13-4Q3LI77 160 aa8.91□□□□□ -0.98
SEC23A-213ENST00000557280 TMEM258P61165 79 aa8.9□□□□□ -0.98
SEC23A-213ENST00000557280 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
SEC23A-213ENST00000557280 SEC61GP60059 68 aa8.83□□□□□ -1
SEC23A-213ENST00000557280 SERP1Q9Y6X1 66 aa8.82□□□□□ -1
SEC23A-213ENST00000557280 MT1XP80297 61 aa8.81□□□□□ -1
SEC23A-213ENST00000557280 MACF1Q9UPN3 7388 aaKnown RBP8.77□□□□□ -1.01
SEC23A-213ENST00000557280 A0A1B0GU69 56 aa8.72□□□□□ -1.01
SEC23A-213ENST00000557280 A0A1B0GU33 70 aa8.71□□□□□ -1.02
SEC23A-213ENST00000557280 SPATA8Q6RVD6 105 aa8.69□□□□□ -1.02
SEC23A-213ENST00000557280 PRO2289Q9P1D8 64 aa8.68□□□□□ -1.02
SEC23A-213ENST00000557280 SYNE2Q8WXH0 6885 aaKnown RBP8.64□□□□□ -1.03
SEC23A-213ENST00000557280 A0A0D9SG42 100 aa8.63□□□□□ -1.03
SEC23A-213ENST00000557280 LINC01558Q9Y6Z2 57 aa8.61□□□□□ -1.03
SEC23A-213ENST00000557280 PCP4P48539 62 aa8.57□□□□□ -1.04
SEC23A-213ENST00000557280 PRR15LQ9BU68 103 aa8.52□□□□□ -1.05
SEC23A-213ENST00000557280 KRTAP6-3Q3LI67 103 aa8.5□□□□□ -1.05
SEC23A-213ENST00000557280 A8MU10 97 aa8.48□□□□□ -1.05
SEC23A-213ENST00000557280 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
SEC23A-213ENST00000557280 KRTAP12-2P59991 146 aa8.44□□□□□ -1.06
SEC23A-213ENST00000557280 SPINT4Q6UDR6 99 aa8.44□□□□□ -1.06
SEC23A-213ENST00000557280 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
SEC23A-213ENST00000557280 KMT2DO14686 5537 aa8.43□□□□□ -1.06
SEC23A-213ENST00000557280 KRTAP10-7P60409 375 aaPredicted RBP8.42□□□□□ -1.06
SEC23A-213ENST00000557280 SMIM26A0A096LP01 95 aa8.41□□□□□ -1.06
SEC23A-213ENST00000557280 KRTAP10-12P60413 245 aa8.33□□□□□ -1.08
SEC23A-213ENST00000557280 KRTAP4-8A0A0G2JLE6 195 aa8.31□□□□□ -1.08
SEC23A-213ENST00000557280 KRTAP4-8Q9BYQ9 185 aa8.31□□□□□ -1.08
SEC23A-213ENST00000557280 KRTAP5-9P26371 169 aa8.3□□□□□ -1.08
SEC23A-213ENST00000557280 Q1T7F1 81 aa8.3□□□□□ -1.08
SEC23A-213ENST00000557280 UQCR11O14957 56 aa8.28□□□□□ -1.08
SEC23A-213ENST00000557280 PSPHP1O15172 72 aa8.28□□□□□ -1.08
SEC23A-213ENST00000557280 V9GYY9 64 aa8.27□□□□□ -1.09
SEC23A-213ENST00000557280 KRTAP8-1Q8IUC2 63 aa8.25□□□□□ -1.09
SEC23A-213ENST00000557280 MUC12Q9UKN1 5478 aa8.23□□□□□ -1.09
SEC23A-213ENST00000557280 RPS28P62857 69 aaKnown RBP8.2□□□□□ -1.1
SEC23A-213ENST00000557280 MIR22HGQ0VDD5 57 aa8.16□□□□□ -1.1
SEC23A-213ENST00000557280 SPRR2FQ96RM1 72 aa8.16□□□□□ -1.1
SEC23A-213ENST00000557280 NEBP20929 6669 aa8.1□□□□□ -1.11
SEC23A-213ENST00000557280 MDN1Q9NU22 5596 aa8.08□□□□□ -1.12
SEC23A-213ENST00000557280 C10orf95Q9H7T3 257 aa8.07□□□□□ -1.12
SEC23A-213ENST00000557280 A6NED7 52 aa7.98□□□□□ -1.13
SEC23A-213ENST00000557280 SPRR2EP22531 72 aa7.95□□□□□ -1.14
SEC23A-213ENST00000557280 SPRR2BP35325 72 aa7.95□□□□□ -1.14
SEC23A-213ENST00000557280 SPRR2AP35326 72 aa7.95□□□□□ -1.14
SEC23A-213ENST00000557280 LCE1AQ5T7P2 110 aa7.91□□□□□ -1.14
SEC23A-213ENST00000557280 TNP1P09430 55 aa7.88□□□□□ -1.15
SEC23A-213ENST00000557280 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
SEC23A-213ENST00000557280 KRTAP20-1Q3LI63 56 aa7.85□□□□□ -1.15
SEC23A-213ENST00000557280 K7ERS5 55 aa7.84□□□□□ -1.15
SEC23A-213ENST00000557280 LCE3AQ5TA76 89 aa7.8□□□□□ -1.16
SEC23A-213ENST00000557280 KRTAP19-5Q3LI72 72 aa7.78□□□□□ -1.16
SEC23A-213ENST00000557280 MT1EP04732 61 aa7.77□□□□□ -1.17
SEC23A-213ENST00000557280 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
SEC23A-213ENST00000557280 SPRR2DP22532 72 aa7.67□□□□□ -1.18
SEC23A-213ENST00000557280 KRTAP2-3P0C7H8 128 aa7.63□□□□□ -1.19
SEC23A-213ENST00000557280 KRTAP25-1Q3LHN0 102 aa7.63□□□□□ -1.19
SEC23A-213ENST00000557280 KRTAP2-4Q9BYR9 128 aa7.63□□□□□ -1.19
SEC23A-213ENST00000557280 KRTAP19-3Q7Z4W3 81 aa7.59□□□□□ -1.19
SEC23A-213ENST00000557280 LCE5AQ5TCM9 118 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms