RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 UBL5Q9BZL1 73 aa3.38□□□□□ -1.87
PCNX1-213ENST00000556846 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
PCNX1-213ENST00000556846 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
PCNX1-213ENST00000556846 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
PCNX1-213ENST00000556846 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
PCNX1-213ENST00000556846 FAM236AA0A1B0GUQ0 79 aa3.34□□□□□ -1.87
PCNX1-213ENST00000556846 FAM236BA0A1B0GV22 79 aa3.34□□□□□ -1.87
PCNX1-213ENST00000556846 A0A1B0GV90 55 aa3.34□□□□□ -1.87
PCNX1-213ENST00000556846 C5orf47Q569G3 176 aa3.34□□□□□ -1.87
PCNX1-213ENST00000556846 COL5A1-AS1Q5SY13 56 aa3.34□□□□□ -1.87
PCNX1-213ENST00000556846 C1orf64Q8NEQ6 169 aa3.32□□□□□ -1.88
PCNX1-213ENST00000556846 K7EP34 96 aa3.31□□□□□ -1.88
PCNX1-213ENST00000556846 CSAG1Q6PB30 78 aa3.31□□□□□ -1.88
PCNX1-213ENST00000556846 TP53AIP1Q9HCN2 124 aa3.31□□□□□ -1.88
PCNX1-213ENST00000556846 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
PCNX1-213ENST00000556846 S4R3F8 94 aa3.31□□□□□ -1.88
PCNX1-213ENST00000556846 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
PCNX1-213ENST00000556846 GTF2H5Q6ZYL4 71 aa3.29□□□□□ -1.88
PCNX1-213ENST00000556846 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
PCNX1-213ENST00000556846 F8W1H4 67 aa3.27□□□□□ -1.89
PCNX1-213ENST00000556846 LCA10Q71F78 164 aa3.27□□□□□ -1.89
PCNX1-213ENST00000556846 A6NN06 94 aa3.25□□□□□ -1.89
PCNX1-213ENST00000556846 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
PCNX1-213ENST00000556846 ETDBQ3ZM63 59 aa3.25□□□□□ -1.89
PCNX1-213ENST00000556846 Q5VV11 94 aa3.25□□□□□ -1.89
PCNX1-213ENST00000556846 PCP4P48539 62 aa3.24□□□□□ -1.89
PCNX1-213ENST00000556846 CYP4F30PQ9H0H9 118 aa3.24□□□□□ -1.89
PCNX1-213ENST00000556846 LOC101927531A0A1B0GV80 90 aa3.22□□□□□ -1.89
PCNX1-213ENST00000556846 KLKP1Q107X0 134 aa3.22□□□□□ -1.89
PCNX1-213ENST00000556846 TRAV22A0A0B4J277 110 aa3.21□□□□□ -1.9
PCNX1-213ENST00000556846 MT1BP07438 61 aa3.21□□□□□ -1.9
PCNX1-213ENST00000556846 HIST1H4AP62805 103 aaKnown RBP3.21□□□□□ -1.9
PCNX1-213ENST00000556846 SPRR2GQ9BYE4 73 aa3.21□□□□□ -1.9
PCNX1-213ENST00000556846 ACYP1P07311 99 aa3.2□□□□□ -1.9
PCNX1-213ENST00000556846 IMUPQ9GZP8 106 aa3.2□□□□□ -1.9
PCNX1-213ENST00000556846 KRTAP19-8Q3LI54 63 aa3.19□□□□□ -1.9
PCNX1-213ENST00000556846 A0A087WVE0 104 aa3.18□□□□□ -1.9
PCNX1-213ENST00000556846 UQCRQO14949 82 aa3.18□□□□□ -1.9
PCNX1-213ENST00000556846 NDUFC1O43677 76 aa3.18□□□□□ -1.9
PCNX1-213ENST00000556846 CRIPTQ9P021 101 aa3.18□□□□□ -1.9
PCNX1-213ENST00000556846 H0Y9P7 68 aa3.17□□□□□ -1.9
PCNX1-213ENST00000556846 ATOX1O00244 68 aa3.17□□□□□ -1.9
PCNX1-213ENST00000556846 ATP5EP2Q5VTU8 51 aa3.17□□□□□ -1.9
PCNX1-213ENST00000556846 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
PCNX1-213ENST00000556846 K7ERU9 68 aa3.15□□□□□ -1.91
PCNX1-213ENST00000556846 FAM240AA0A1B0GVK7 77 aa3.14□□□□□ -1.91
PCNX1-213ENST00000556846 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
PCNX1-213ENST00000556846 LINC00208Q96KT6 92 aa3.13□□□□□ -1.91
PCNX1-213ENST00000556846 NEBP20929 6669 aa3.13□□□□□ -1.91
PCNX1-213ENST00000556846 A8MUN3 132 aa3.12□□□□□ -1.91
PCNX1-213ENST00000556846 H0YAA0 97 aa3.12□□□□□ -1.91
PCNX1-213ENST00000556846 ADM2Q7Z4H4 148 aa3.12□□□□□ -1.91
PCNX1-213ENST00000556846 MP68P56378 58 aa3.11□□□□□ -1.91
PCNX1-213ENST00000556846 LINC00643Q86TS7 51 aa3.11□□□□□ -1.91
PCNX1-213ENST00000556846 SCGB1A1P11684 91 aa3.09□□□□□ -1.91
PCNX1-213ENST00000556846 MT3P25713 68 aa3.09□□□□□ -1.91
PCNX1-213ENST00000556846 PLAC4Q8WY50 150 aa3.08□□□□□ -1.92
PCNX1-213ENST00000556846 PRO2289Q9P1D8 64 aa3.08□□□□□ -1.92
PCNX1-213ENST00000556846 J3QR89 54 aa3.07□□□□□ -1.92
PCNX1-213ENST00000556846 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
PCNX1-213ENST00000556846 SVIPQ8NHG7 77 aa3.06□□□□□ -1.92
PCNX1-213ENST00000556846 C20orf197Q8N268 126 aa3.05□□□□□ -1.92
PCNX1-213ENST00000556846 OCR1Q9BZK8 76 aa3.05□□□□□ -1.92
PCNX1-213ENST00000556846 R4GN34 69 aa3.05□□□□□ -1.92
PCNX1-213ENST00000556846 M0QZ58 72 aa3.03□□□□□ -1.92
PCNX1-213ENST00000556846 H3BPC8 53 aa3.02□□□□□ -1.93
PCNX1-213ENST00000556846 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
PCNX1-213ENST00000556846 P0C880 135 aa3□□□□□ -1.93
PCNX1-213ENST00000556846 DMAC1Q96GE9 116 aa3□□□□□ -1.93
PCNX1-213ENST00000556846 SPRR2FQ96RM1 72 aa3□□□□□ -1.93
PCNX1-213ENST00000556846 MT1XP80297 61 aa2.99□□□□□ -1.93
PCNX1-213ENST00000556846 KRTAP8-1Q8IUC2 63 aa2.99□□□□□ -1.93
PCNX1-213ENST00000556846 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
PCNX1-213ENST00000556846 SPRR2EP22531 72 aa2.98□□□□□ -1.93
PCNX1-213ENST00000556846 SPRR2BP35325 72 aa2.98□□□□□ -1.93
PCNX1-213ENST00000556846 SPRR2AP35326 72 aa2.98□□□□□ -1.93
PCNX1-213ENST00000556846 KRTAP2-3P0C7H8 128 aa2.97□□□□□ -1.93
PCNX1-213ENST00000556846 KRTAP2-4Q9BYR9 128 aa2.97□□□□□ -1.93
PCNX1-213ENST00000556846 TRAV7A0A075B6U4 112 aa2.96□□□□□ -1.94
PCNX1-213ENST00000556846 ACYP2P14621 99 aa2.96□□□□□ -1.94
PCNX1-213ENST00000556846 MT-ATP8P03928 68 aa2.95□□□□□ -1.94
PCNX1-213ENST00000556846 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
PCNX1-213ENST00000556846 KMT2DO14686 5537 aa2.94□□□□□ -1.94
PCNX1-213ENST00000556846 CHKB-CPT1BH3BT56 60 aa2.93□□□□□ -1.94
PCNX1-213ENST00000556846 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
PCNX1-213ENST00000556846 ANAPC13Q9BS18 74 aa2.93□□□□□ -1.94
PCNX1-213ENST00000556846 SMIM20Q8N5G0 67 aa2.91□□□□□ -1.94
PCNX1-213ENST00000556846 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
PCNX1-213ENST00000556846 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
PCNX1-213ENST00000556846 SPRR2DP22532 72 aa2.88□□□□□ -1.95
PCNX1-213ENST00000556846 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
PCNX1-213ENST00000556846 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
PCNX1-213ENST00000556846 SNURFQ9Y675 71 aa2.86□□□□□ -1.95
PCNX1-213ENST00000556846 CCDC179H3BU77 68 aa2.84□□□□□ -1.95
PCNX1-213ENST00000556846 CAMK2N1Q7Z7J9 78 aa2.83□□□□□ -1.96
PCNX1-213ENST00000556846 RPS28P62857 69 aaKnown RBP2.81□□□□□ -1.96
PCNX1-213ENST00000556846 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
PCNX1-213ENST00000556846 COX7CP15954 63 aa2.79□□□□□ -1.96
PCNX1-213ENST00000556846 SEC61GP60059 68 aa2.78□□□□□ -1.96
PCNX1-213ENST00000556846 SERP2Q8N6R1 65 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms