RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 USH2AO75445 5202 aa7.2□□□□□ -1.26
SLIRP-207ENST00000556831 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
SLIRP-207ENST00000556831 MACF1Q9UPN3 7388 aaKnown RBP7.18□□□□□ -1.26
SLIRP-207ENST00000556831 TRAV22A0A0B4J277 110 aa7.18□□□□□ -1.26
SLIRP-207ENST00000556831 H0Y9P7 68 aa7.18□□□□□ -1.26
SLIRP-207ENST00000556831 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
SLIRP-207ENST00000556831 KRTAP10-6P60371 365 aaPredicted RBP7.16□□□□□ -1.26
SLIRP-207ENST00000556831 V9GYY9 64 aa7.16□□□□□ -1.26
SLIRP-207ENST00000556831 SPINK7P58062 85 aa7.15□□□□□ -1.26
SLIRP-207ENST00000556831 LINC00208Q96KT6 92 aa7.15□□□□□ -1.26
SLIRP-207ENST00000556831 LOC100996750A0A140TA64 210 aa7.14□□□□□ -1.27
SLIRP-207ENST00000556831 HRES1P13985 223 aa7.14□□□□□ -1.27
SLIRP-207ENST00000556831 KRTAP4-6Q9BYQ5 205 aa7.14□□□□□ -1.27
SLIRP-207ENST00000556831 C1orf64Q8NEQ6 169 aa7.12□□□□□ -1.27
SLIRP-207ENST00000556831 C4orf26Q17RF5 130 aa7.11□□□□□ -1.27
SLIRP-207ENST00000556831 MPLKIPQ8TAP9 179 aa7.09□□□□□ -1.27
SLIRP-207ENST00000556831 Q1T7F1 81 aa7.06□□□□□ -1.28
SLIRP-207ENST00000556831 LOC101927531A0A1B0GV80 90 aa7.04□□□□□ -1.28
SLIRP-207ENST00000556831 PRO0628Q9UI54 55 aa7.04□□□□□ -1.28
SLIRP-207ENST00000556831 IGKV2D-30A0A075B6S6 120 aa7.03□□□□□ -1.28
SLIRP-207ENST00000556831 IGKV2-30P06310 120 aa7.03□□□□□ -1.28
SLIRP-207ENST00000556831 C7orf65Q6ZTY9 151 aa7.02□□□□□ -1.29
SLIRP-207ENST00000556831 NEBP20929 6669 aa6.99□□□□□ -1.29
SLIRP-207ENST00000556831 Q5W150 140 aa6.96□□□□□ -1.3
SLIRP-207ENST00000556831 KRTAP9-8Q9BYQ0 159 aa6.95□□□□□ -1.3
SLIRP-207ENST00000556831 KRTAP20-1Q3LI63 56 aa6.93□□□□□ -1.3
SLIRP-207ENST00000556831 KRTAP6-3Q3LI67 103 aa6.92□□□□□ -1.3
SLIRP-207ENST00000556831 COA5Q86WW8 74 aa6.91□□□□□ -1.3
SLIRP-207ENST00000556831 BRK1Q8WUW1 75 aa6.91□□□□□ -1.3
SLIRP-207ENST00000556831 H1FX-AS1Q4G0G2 97 aa6.9□□□□□ -1.3
SLIRP-207ENST00000556831 MT2AP02795 61 aa6.87□□□□□ -1.31
SLIRP-207ENST00000556831 ACYP2P14621 99 aa6.85□□□□□ -1.31
SLIRP-207ENST00000556831 MT1FP04733 61 aa6.83□□□□□ -1.32
SLIRP-207ENST00000556831 KRTAP10-10P60014 251 aa6.83□□□□□ -1.32
SLIRP-207ENST00000556831 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
SLIRP-207ENST00000556831 LINC01558Q9Y6Z2 57 aa6.81□□□□□ -1.32
SLIRP-207ENST00000556831 PSPHP1O15172 72 aa6.8□□□□□ -1.32
SLIRP-207ENST00000556831 PRR15LQ9BU68 103 aa6.8□□□□□ -1.32
SLIRP-207ENST00000556831 A8MUN3 132 aa6.78□□□□□ -1.32
SLIRP-207ENST00000556831 CHKB-CPT1BH3BT56 60 aa6.77□□□□□ -1.33
SLIRP-207ENST00000556831 Q5VV11 94 aa6.77□□□□□ -1.33
SLIRP-207ENST00000556831 DMAC1Q96GE9 116 aa6.77□□□□□ -1.33
SLIRP-207ENST00000556831 S4R3F8 94 aa6.73□□□□□ -1.33
SLIRP-207ENST00000556831 MUC12Q9UKN1 5478 aa6.73□□□□□ -1.33
SLIRP-207ENST00000556831 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
SLIRP-207ENST00000556831 A6NED7 52 aa6.71□□□□□ -1.34
SLIRP-207ENST00000556831 CDC42SE1Q9NRR8 79 aa6.68□□□□□ -1.34
SLIRP-207ENST00000556831 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
SLIRP-207ENST00000556831 CSAG1Q6PB30 78 aa6.65□□□□□ -1.34
SLIRP-207ENST00000556831 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
SLIRP-207ENST00000556831 LCA10Q71F78 164 aa6.62□□□□□ -1.35
SLIRP-207ENST00000556831 A0A1B0GU69 56 aa6.59□□□□□ -1.35
SLIRP-207ENST00000556831 PMAIP1Q13794 54 aa6.58□□□□□ -1.36
SLIRP-207ENST00000556831 GPR98Q8WXG9 6306 aa6.57□□□□□ -1.36
SLIRP-207ENST00000556831 SEC61GP60059 68 aa6.55□□□□□ -1.36
SLIRP-207ENST00000556831 UQCR11O14957 56 aa6.5□□□□□ -1.37
SLIRP-207ENST00000556831 KMT2DO14686 5537 aa6.5□□□□□ -1.37
SLIRP-207ENST00000556831 KRTAP19-6Q3LI70 58 aa6.48□□□□□ -1.37
SLIRP-207ENST00000556831 KTN1-AS1Q86SY8 53 aa6.47□□□□□ -1.37
SLIRP-207ENST00000556831 MDN1Q9NU22 5596 aa6.47□□□□□ -1.37
SLIRP-207ENST00000556831 KRTAP2-3P0C7H8 128 aa6.46□□□□□ -1.38
SLIRP-207ENST00000556831 KRTAP2-4Q9BYR9 128 aa6.46□□□□□ -1.38
SLIRP-207ENST00000556831 SPATA8Q6RVD6 105 aa6.43□□□□□ -1.38
SLIRP-207ENST00000556831 A6NN06 94 aa6.42□□□□□ -1.38
SLIRP-207ENST00000556831 MIR22HGQ0VDD5 57 aa6.42□□□□□ -1.38
SLIRP-207ENST00000556831 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
SLIRP-207ENST00000556831 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
SLIRP-207ENST00000556831 H0YAA0 97 aa6.36□□□□□ -1.39
SLIRP-207ENST00000556831 A8MU10 97 aa6.35□□□□□ -1.39
SLIRP-207ENST00000556831 SPRR2GQ9BYE4 73 aa6.34□□□□□ -1.39
SLIRP-207ENST00000556831 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
SLIRP-207ENST00000556831 MT1BP07438 61 aa6.28□□□□□ -1.4
SLIRP-207ENST00000556831 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
SLIRP-207ENST00000556831 A0A1B0GU33 70 aa6.24□□□□□ -1.41
SLIRP-207ENST00000556831 K7ERS5 55 aa6.23□□□□□ -1.41
SLIRP-207ENST00000556831 R4GN34 69 aa6.2□□□□□ -1.42
SLIRP-207ENST00000556831 KRTAP2-2Q9BYT5 123 aa6.19□□□□□ -1.42
SLIRP-207ENST00000556831 KRTAP2-1Q9BYU5 128 aa6.19□□□□□ -1.42
SLIRP-207ENST00000556831 KRTAP5-9P26371 169 aa6.14□□□□□ -1.43
SLIRP-207ENST00000556831 M0QZ58 72 aa6.13□□□□□ -1.43
SLIRP-207ENST00000556831 P0C880 135 aa6.13□□□□□ -1.43
SLIRP-207ENST00000556831 KRTAP10-5P60370 271 aa6.1□□□□□ -1.43
SLIRP-207ENST00000556831 PLAC4Q8WY50 150 aa6.1□□□□□ -1.43
SLIRP-207ENST00000556831 LINC01554Q52M75 96 aa6.06□□□□□ -1.44
SLIRP-207ENST00000556831 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
SLIRP-207ENST00000556831 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
SLIRP-207ENST00000556831 PRAC1Q96KF2 57 aa5.96□□□□□ -1.46
SLIRP-207ENST00000556831 KRTAP9-9Q9BYP9 154 aa5.95□□□□□ -1.46
SLIRP-207ENST00000556831 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
SLIRP-207ENST00000556831 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
SLIRP-207ENST00000556831 KRTAP4-12Q9BQ66 201 aa5.91□□□□□ -1.46
SLIRP-207ENST00000556831 ROMO1P60602 79 aa5.89□□□□□ -1.47
SLIRP-207ENST00000556831 MT1XP80297 61 aa5.89□□□□□ -1.47
SLIRP-207ENST00000556831 KRTAP25-1Q3LHN0 102 aa5.86□□□□□ -1.47
SLIRP-207ENST00000556831 SPRR2EP22531 72 aa5.84□□□□□ -1.47
SLIRP-207ENST00000556831 SPRR2BP35325 72 aa5.84□□□□□ -1.47
SLIRP-207ENST00000556831 SPRR2AP35326 72 aa5.84□□□□□ -1.47
SLIRP-207ENST00000556831 A0A0D9SG42 100 aa5.79□□□□□ -1.48
SLIRP-207ENST00000556831 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
SLIRP-207ENST00000556831 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms