RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 KLKP1Q107X0 134 aa5.08□□□□□ -1.6
SHMT2-224ENST00000556737 MT1FP04733 61 aa5.07□□□□□ -1.6
SHMT2-224ENST00000556737 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
SHMT2-224ENST00000556737 NDUFC1O43677 76 aa5.05□□□□□ -1.6
SHMT2-224ENST00000556737 CYSTM1Q9H1C7 97 aa5.04□□□□□ -1.6
SHMT2-224ENST00000556737 H7BZZ5 65 aa5.01□□□□□ -1.61
SHMT2-224ENST00000556737 C4orf26Q17RF5 130 aa5.01□□□□□ -1.61
SHMT2-224ENST00000556737 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
SHMT2-224ENST00000556737 LCE2BO14633 110 aa5□□□□□ -1.61
SHMT2-224ENST00000556737 KRTAP10-10P60014 251 aa4.98□□□□□ -1.61
SHMT2-224ENST00000556737 FCGBPQ9Y6R7 5405 aaPredicted RBP4.98□□□□□ -1.61
SHMT2-224ENST00000556737 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.97□□□□□ -1.61
SHMT2-224ENST00000556737 TMEM258P61165 79 aa4.96□□□□□ -1.62
SHMT2-224ENST00000556737 SPANXA2-OT1Q8N9U9 137 aa4.96□□□□□ -1.62
SHMT2-224ENST00000556737 ATP5EP56381 51 aaPredicted RBP4.93□□□□□ -1.62
SHMT2-224ENST00000556737 A8MUN3 132 aa4.91□□□□□ -1.62
SHMT2-224ENST00000556737 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
SHMT2-224ENST00000556737 ACYP2P14621 99 aa4.9□□□□□ -1.63
SHMT2-224ENST00000556737 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.63
SHMT2-224ENST00000556737 DMAC1Q96GE9 116 aa4.9□□□□□ -1.63
SHMT2-224ENST00000556737 CHKB-CPT1BH3BT56 60 aa4.89□□□□□ -1.63
SHMT2-224ENST00000556737 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
SHMT2-224ENST00000556737 COA5Q86WW8 74 aa4.85□□□□□ -1.63
SHMT2-224ENST00000556737 S4R3F8 94 aa4.84□□□□□ -1.63
SHMT2-224ENST00000556737 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
SHMT2-224ENST00000556737 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
SHMT2-224ENST00000556737 SERP1Q9Y6X1 66 aa4.81□□□□□ -1.64
SHMT2-224ENST00000556737 SPTSSBQ8NFR3 76 aa4.79□□□□□ -1.64
SHMT2-224ENST00000556737 LCA10Q71F78 164 aa4.78□□□□□ -1.64
SHMT2-224ENST00000556737 SYNE2Q8WXH0 6885 aaKnown RBP4.77□□□□□ -1.65
SHMT2-224ENST00000556737 CSAG1Q6PB30 78 aa4.73□□□□□ -1.65
SHMT2-224ENST00000556737 KRTAP3-3Q9BYR6 98 aa4.7□□□□□ -1.66
SHMT2-224ENST00000556737 RPS28P62857 69 aaKnown RBP4.69□□□□□ -1.66
SHMT2-224ENST00000556737 SMIM26A0A096LP01 95 aa4.67□□□□□ -1.66
SHMT2-224ENST00000556737 MT1BP07438 61 aa4.66□□□□□ -1.66
SHMT2-224ENST00000556737 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
SHMT2-224ENST00000556737 SEC61GP60059 68 aa4.65□□□□□ -1.67
SHMT2-224ENST00000556737 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
SHMT2-224ENST00000556737 A0A1B0GU69 56 aa4.61□□□□□ -1.67
SHMT2-224ENST00000556737 ADM2Q7Z4H4 148 aa4.61□□□□□ -1.67
SHMT2-224ENST00000556737 V9GYY9 64 aa4.61□□□□□ -1.67
SHMT2-224ENST00000556737 Q5VV11 94 aa4.6□□□□□ -1.67
SHMT2-224ENST00000556737 PRR15LQ9BU68 103 aa4.6□□□□□ -1.67
SHMT2-224ENST00000556737 LINC01558Q9Y6Z2 57 aa4.59□□□□□ -1.67
SHMT2-224ENST00000556737 Q1T7F1 81 aa4.57□□□□□ -1.68
SHMT2-224ENST00000556737 PSPHP1O15172 72 aa4.56□□□□□ -1.68
SHMT2-224ENST00000556737 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
SHMT2-224ENST00000556737 H0YAA0 97 aa4.55□□□□□ -1.68
SHMT2-224ENST00000556737 A6NN06 94 aa4.54□□□□□ -1.68
SHMT2-224ENST00000556737 KRTAP10-5P60370 271 aa4.54□□□□□ -1.68
SHMT2-224ENST00000556737 CRIPTQ9P021 101 aa4.54□□□□□ -1.68
SHMT2-224ENST00000556737 NEBP20929 6669 aa4.54□□□□□ -1.68
SHMT2-224ENST00000556737 P0C880 135 aa4.52□□□□□ -1.69
SHMT2-224ENST00000556737 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
SHMT2-224ENST00000556737 KRTAP3-2Q9BYR7 98 aa4.5□□□□□ -1.69
SHMT2-224ENST00000556737 A0A1B0GU33 70 aa4.49□□□□□ -1.69
SHMT2-224ENST00000556737 M0QZ58 72 aa4.46□□□□□ -1.7
SHMT2-224ENST00000556737 R4GN34 69 aa4.46□□□□□ -1.7
SHMT2-224ENST00000556737 A6NED7 52 aa4.45□□□□□ -1.7
SHMT2-224ENST00000556737 UQCR11O14957 56 aa4.43□□□□□ -1.7
SHMT2-224ENST00000556737 SPATA8Q6RVD6 105 aa4.42□□□□□ -1.7
SHMT2-224ENST00000556737 LINC01554Q52M75 96 aa4.41□□□□□ -1.7
SHMT2-224ENST00000556737 MDN1Q9NU22 5596 aa4.4□□□□□ -1.7
SHMT2-224ENST00000556737 KMT2DO14686 5537 aa4.39□□□□□ -1.71
SHMT2-224ENST00000556737 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
SHMT2-224ENST00000556737 A0A0D9SG42 100 aa4.38□□□□□ -1.71
SHMT2-224ENST00000556737 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
SHMT2-224ENST00000556737 MT1XP80297 61 aa4.37□□□□□ -1.71
SHMT2-224ENST00000556737 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
SHMT2-224ENST00000556737 KRTAP13-4Q3LI77 160 aa4.37□□□□□ -1.71
SHMT2-224ENST00000556737 A8MU10 97 aa4.33□□□□□ -1.72
SHMT2-224ENST00000556737 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
SHMT2-224ENST00000556737 PLAC4Q8WY50 150 aa4.31□□□□□ -1.72
SHMT2-224ENST00000556737 CDC42SE1Q9NRR8 79 aa4.3□□□□□ -1.72
SHMT2-224ENST00000556737 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
SHMT2-224ENST00000556737 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
SHMT2-224ENST00000556737 K7ERS5 55 aa4.26□□□□□ -1.73
SHMT2-224ENST00000556737 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
SHMT2-224ENST00000556737 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
SHMT2-224ENST00000556737 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.74
SHMT2-224ENST00000556737 CAMK2N1Q7Z7J9 78 aa4.2□□□□□ -1.74
SHMT2-224ENST00000556737 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
SHMT2-224ENST00000556737 KRTAP4-8A0A0G2JLE6 195 aa4.16□□□□□ -1.74
SHMT2-224ENST00000556737 KRTAP10-7P60409 375 aaPredicted RBP4.16□□□□□ -1.74
SHMT2-224ENST00000556737 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
SHMT2-224ENST00000556737 SPRR2EP22531 72 aa4.15□□□□□ -1.75
SHMT2-224ENST00000556737 SPRR2BP35325 72 aa4.15□□□□□ -1.75
SHMT2-224ENST00000556737 SPRR2AP35326 72 aa4.15□□□□□ -1.75
SHMT2-224ENST00000556737 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
SHMT2-224ENST00000556737 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
SHMT2-224ENST00000556737 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
SHMT2-224ENST00000556737 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
SHMT2-224ENST00000556737 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
SHMT2-224ENST00000556737 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
SHMT2-224ENST00000556737 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
SHMT2-224ENST00000556737 SPRR2DP22532 72 aa4.01□□□□□ -1.77
SHMT2-224ENST00000556737 ROMO1P60602 79 aa4.01□□□□□ -1.77
SHMT2-224ENST00000556737 C10orf95Q9H7T3 257 aa3.99□□□□□ -1.77
SHMT2-224ENST00000556737 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
SHMT2-224ENST00000556737 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 177.3 ms