RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 TRAV7A0A075B6U4 112 aa9.59□□□□□ -0.87
RCCD1-205ENST00000556333 SSPOA2VEC9 5147 aa9.55□□□□□ -0.88
RCCD1-205ENST00000556333 CSAG1Q6PB30 78 aa9.55□□□□□ -0.88
RCCD1-205ENST00000556333 A8MUN3 132 aa9.52□□□□□ -0.89
RCCD1-205ENST00000556333 USH2AO75445 5202 aa9.52□□□□□ -0.89
RCCD1-205ENST00000556333 KRTAP9-3Q9BYQ3 159 aa9.45□□□□□ -0.9
RCCD1-205ENST00000556333 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
RCCD1-205ENST00000556333 FCGBPQ9Y6R7 5405 aaPredicted RBP9.44□□□□□ -0.9
RCCD1-205ENST00000556333 NDUFC1O43677 76 aa9.43□□□□□ -0.9
RCCD1-205ENST00000556333 SERP2Q8N6R1 65 aa9.4□□□□□ -0.9
RCCD1-205ENST00000556333 SNURFQ9Y675 71 aa9.39□□□□□ -0.91
RCCD1-205ENST00000556333 DMAC1Q96GE9 116 aa9.37□□□□□ -0.91
RCCD1-205ENST00000556333 C20orf197Q8N268 126 aa9.35□□□□□ -0.91
RCCD1-205ENST00000556333 LCE2BO14633 110 aa9.34□□□□□ -0.91
RCCD1-205ENST00000556333 SYNE2Q8WXH0 6885 aaKnown RBP9.29□□□□□ -0.92
RCCD1-205ENST00000556333 KRTAP19-1Q8IUB9 90 aa9.28□□□□□ -0.92
RCCD1-205ENST00000556333 ACYP2P14621 99 aa9.26□□□□□ -0.93
RCCD1-205ENST00000556333 MACF1Q9UPN3 7388 aaKnown RBP9.25□□□□□ -0.93
RCCD1-205ENST00000556333 COX7CP15954 63 aa9.22□□□□□ -0.93
RCCD1-205ENST00000556333 H0YAA0 97 aa9.18□□□□□ -0.94
RCCD1-205ENST00000556333 ADM2Q7Z4H4 148 aa9.16□□□□□ -0.94
RCCD1-205ENST00000556333 SPANXA2-OT1Q8N9U9 137 aa9.16□□□□□ -0.94
RCCD1-205ENST00000556333 CHKB-CPT1BH3BT56 60 aa9.14□□□□□ -0.95
RCCD1-205ENST00000556333 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
RCCD1-205ENST00000556333 SPTSSBQ8NFR3 76 aa9.1□□□□□ -0.95
RCCD1-205ENST00000556333 CRIPTQ9P021 101 aa9.09□□□□□ -0.95
RCCD1-205ENST00000556333 SPRR2GQ9BYE4 73 aa9.07□□□□□ -0.96
RCCD1-205ENST00000556333 Q5VV11 94 aa9□□□□□ -0.97
RCCD1-205ENST00000556333 CYSTM1Q9H1C7 97 aa8.99□□□□□ -0.97
RCCD1-205ENST00000556333 H7BZZ5 65 aa8.97□□□□□ -0.97
RCCD1-205ENST00000556333 P0C880 135 aa8.96□□□□□ -0.98
RCCD1-205ENST00000556333 KRTAP6-3Q3LI67 103 aa8.96□□□□□ -0.98
RCCD1-205ENST00000556333 KRTAP19-6Q3LI70 58 aa8.96□□□□□ -0.98
RCCD1-205ENST00000556333 KRTAP19-8Q3LI54 63 aa8.95□□□□□ -0.98
RCCD1-205ENST00000556333 COA5Q86WW8 74 aa8.92□□□□□ -0.98
RCCD1-205ENST00000556333 MT1BP07438 61 aa8.91□□□□□ -0.98
RCCD1-205ENST00000556333 R4GN34 69 aa8.91□□□□□ -0.98
RCCD1-205ENST00000556333 CCDC179H3BU77 68 aa8.9□□□□□ -0.98
RCCD1-205ENST00000556333 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
RCCD1-205ENST00000556333 M0QZ58 72 aa8.86□□□□□ -0.99
RCCD1-205ENST00000556333 NEBP20929 6669 aa8.77□□□□□ -1.01
RCCD1-205ENST00000556333 A6NN06 94 aa8.74□□□□□ -1.01
RCCD1-205ENST00000556333 LINC01554Q52M75 96 aa8.74□□□□□ -1.01
RCCD1-205ENST00000556333 PLAC4Q8WY50 150 aa8.7□□□□□ -1.02
RCCD1-205ENST00000556333 SEC61GP60059 68 aa8.69□□□□□ -1.02
RCCD1-205ENST00000556333 ATP5EP56381 51 aaPredicted RBP8.68□□□□□ -1.02
RCCD1-205ENST00000556333 KRTAP10-5P60370 271 aa8.65□□□□□ -1.02
RCCD1-205ENST00000556333 SERP1Q9Y6X1 66 aa8.65□□□□□ -1.02
RCCD1-205ENST00000556333 KRTAP20-1Q3LI63 56 aa8.59□□□□□ -1.03
RCCD1-205ENST00000556333 TMEM258P61165 79 aa8.58□□□□□ -1.04
RCCD1-205ENST00000556333 MUC12Q9UKN1 5478 aa8.55□□□□□ -1.04
RCCD1-205ENST00000556333 PRO2289Q9P1D8 64 aa8.52□□□□□ -1.05
RCCD1-205ENST00000556333 KRTAP13-4Q3LI77 160 aa8.5□□□□□ -1.05
RCCD1-205ENST00000556333 A0A1B0GU69 56 aa8.49□□□□□ -1.05
RCCD1-205ENST00000556333 A0A1B0GU33 70 aa8.46□□□□□ -1.06
RCCD1-205ENST00000556333 MT1XP80297 61 aa8.45□□□□□ -1.06
RCCD1-205ENST00000556333 SPATA8Q6RVD6 105 aa8.4□□□□□ -1.06
RCCD1-205ENST00000556333 A0A0D9SG42 100 aa8.36□□□□□ -1.07
RCCD1-205ENST00000556333 PRR15LQ9BU68 103 aa8.34□□□□□ -1.07
RCCD1-205ENST00000556333 LINC01558Q9Y6Z2 57 aa8.3□□□□□ -1.08
RCCD1-205ENST00000556333 MDN1Q9NU22 5596 aa8.29□□□□□ -1.08
RCCD1-205ENST00000556333 CAMK2N1Q7Z7J9 78 aa8.27□□□□□ -1.09
RCCD1-205ENST00000556333 KMT2DO14686 5537 aa8.26□□□□□ -1.09
RCCD1-205ENST00000556333 KRTAP5-9P26371 169 aa8.26□□□□□ -1.09
RCCD1-205ENST00000556333 SPINT4Q6UDR6 99 aa8.24□□□□□ -1.09
RCCD1-205ENST00000556333 SMIM26A0A096LP01 95 aa8.22□□□□□ -1.09
RCCD1-205ENST00000556333 KRTAP2-3P0C7H8 128 aa8.22□□□□□ -1.09
RCCD1-205ENST00000556333 KRTAP2-4Q9BYR9 128 aa8.22□□□□□ -1.09
RCCD1-205ENST00000556333 PCP4P48539 62 aa8.21□□□□□ -1.1
RCCD1-205ENST00000556333 KRTAP12-2P59991 146 aa8.16□□□□□ -1.1
RCCD1-205ENST00000556333 A8MU10 97 aa8.15□□□□□ -1.1
RCCD1-205ENST00000556333 KRTAP12-1P59990 96 aa8.14□□□□□ -1.11
RCCD1-205ENST00000556333 KRTAP10-7P60409 375 aaPredicted RBP8.1□□□□□ -1.11
RCCD1-205ENST00000556333 UQCR11O14957 56 aa8.06□□□□□ -1.12
RCCD1-205ENST00000556333 V9GYY9 64 aa8.06□□□□□ -1.12
RCCD1-205ENST00000556333 KRTAP8-1Q8IUC2 63 aa8.03□□□□□ -1.12
RCCD1-205ENST00000556333 KRTAP10-12P60413 245 aa8.02□□□□□ -1.13
RCCD1-205ENST00000556333 KRTAP4-8A0A0G2JLE6 195 aa7.99□□□□□ -1.13
RCCD1-205ENST00000556333 Q1T7F1 81 aa7.99□□□□□ -1.13
RCCD1-205ENST00000556333 KRTAP4-8Q9BYQ9 185 aa7.99□□□□□ -1.13
RCCD1-205ENST00000556333 PSPHP1O15172 72 aa7.98□□□□□ -1.13
RCCD1-205ENST00000556333 SPRR2FQ96RM1 72 aa7.94□□□□□ -1.14
RCCD1-205ENST00000556333 KRTAP2-2Q9BYT5 123 aa7.92□□□□□ -1.14
RCCD1-205ENST00000556333 KRTAP2-1Q9BYU5 128 aa7.92□□□□□ -1.14
RCCD1-205ENST00000556333 SPRR2EP22531 72 aa7.91□□□□□ -1.14
RCCD1-205ENST00000556333 SPRR2BP35325 72 aa7.91□□□□□ -1.14
RCCD1-205ENST00000556333 SPRR2AP35326 72 aa7.91□□□□□ -1.14
RCCD1-205ENST00000556333 MIR22HGQ0VDD5 57 aa7.91□□□□□ -1.14
RCCD1-205ENST00000556333 RPS28P62857 69 aaKnown RBP7.88□□□□□ -1.15
RCCD1-205ENST00000556333 A6NED7 52 aa7.75□□□□□ -1.17
RCCD1-205ENST00000556333 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
RCCD1-205ENST00000556333 K7ERS5 55 aa7.73□□□□□ -1.17
RCCD1-205ENST00000556333 LCE1AQ5T7P2 110 aa7.72□□□□□ -1.17
RCCD1-205ENST00000556333 TNP1P09430 55 aa7.7□□□□□ -1.18
RCCD1-205ENST00000556333 SPRR2DP22532 72 aa7.66□□□□□ -1.18
RCCD1-205ENST00000556333 GPR98Q8WXG9 6306 aa7.63□□□□□ -1.19
RCCD1-205ENST00000556333 KRTAP19-7Q3SYF9 63 aa7.53□□□□□ -1.2
RCCD1-205ENST00000556333 LCE3AQ5TA76 89 aa7.51□□□□□ -1.21
RCCD1-205ENST00000556333 LCE3BQ5TA77 95 aa7.51□□□□□ -1.21
RCCD1-205ENST00000556333 KRTAP19-5Q3LI72 72 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms