RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 FLG2Q5D862 2391 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-235ENST00000556082 PRR4Q16378 134 aa4.52□□□□□ -1.69
ATXN3-235ENST00000556082 MT1HL1P0DM35 61 aa4.51□□□□□ -1.69
ATXN3-235ENST00000556082 HRES1P13985 223 aa4.49□□□□□ -1.69
ATXN3-235ENST00000556082 Q75L30 129 aa4.49□□□□□ -1.69
ATXN3-235ENST00000556082 RETNLBQ9BQ08 111 aa4.49□□□□□ -1.69
ATXN3-235ENST00000556082 C9orf92A6NGG3 77 aa4.48□□□□□ -1.69
ATXN3-235ENST00000556082 TNXBP22105 4242 aa4.48□□□□□ -1.69
ATXN3-235ENST00000556082 Q1T7F1 81 aa4.47□□□□□ -1.69
ATXN3-235ENST00000556082 DMAC1Q96GE9 116 aa4.47□□□□□ -1.69
ATXN3-235ENST00000556082 KIAA1109Q2LD37 5005 aa4.47□□□□□ -1.69
ATXN3-235ENST00000556082 ACYP2P14621 99 aa4.46□□□□□ -1.7
ATXN3-235ENST00000556082 C7orf65Q6ZTY9 151 aa4.46□□□□□ -1.7
ATXN3-235ENST00000556082 COA5Q86WW8 74 aa4.46□□□□□ -1.7
ATXN3-235ENST00000556082 FAT3Q8TDW7 4589 aa4.46□□□□□ -1.7
ATXN3-235ENST00000556082 LRP1Q07954 4544 aaKnown RBP4.45□□□□□ -1.7
ATXN3-235ENST00000556082 V9GYY9 64 aa4.45□□□□□ -1.7
ATXN3-235ENST00000556082 C4orf26Q17RF5 130 aa4.43□□□□□ -1.7
ATXN3-235ENST00000556082 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-235ENST00000556082 A8MUN3 132 aa4.42□□□□□ -1.7
ATXN3-235ENST00000556082 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
ATXN3-235ENST00000556082 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
ATXN3-235ENST00000556082 SPINK7P58062 85 aa4.4□□□□□ -1.71
ATXN3-235ENST00000556082 ATP11AUNQ6ZP68 121 aa4.39□□□□□ -1.71
ATXN3-235ENST00000556082 TPRXLQ17RH7 258 aa4.37□□□□□ -1.71
ATXN3-235ENST00000556082 LINC01558Q9Y6Z2 57 aa4.36□□□□□ -1.71
ATXN3-235ENST00000556082 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
ATXN3-235ENST00000556082 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
ATXN3-235ENST00000556082 COX6B2Q6YFQ2 88 aa4.32□□□□□ -1.72
ATXN3-235ENST00000556082 PSPHP1O15172 72 aa4.31□□□□□ -1.72
ATXN3-235ENST00000556082 Q5VV11 94 aa4.3□□□□□ -1.72
ATXN3-235ENST00000556082 BIRC6Q9NR09 4857 aa4.3□□□□□ -1.72
ATXN3-235ENST00000556082 PRR15LQ9BU68 103 aa4.29□□□□□ -1.72
ATXN3-235ENST00000556082 HERC2O95714 4834 aa4.29□□□□□ -1.72
ATXN3-235ENST00000556082 SPTSSBQ8NFR3 76 aa4.28□□□□□ -1.72
ATXN3-235ENST00000556082 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
ATXN3-235ENST00000556082 A0A1B0GU69 56 aa4.22□□□□□ -1.73
ATXN3-235ENST00000556082 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
ATXN3-235ENST00000556082 BRK1Q8WUW1 75 aa4.22□□□□□ -1.73
ATXN3-235ENST00000556082 ABCA13Q86UQ4 5058 aa4.22□□□□□ -1.73
ATXN3-235ENST00000556082 A6NED7 52 aa4.19□□□□□ -1.74
ATXN3-235ENST00000556082 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
ATXN3-235ENST00000556082 H1FX-AS1Q4G0G2 97 aa4.18□□□□□ -1.74
ATXN3-235ENST00000556082 SEC61GP60059 68 aa4.17□□□□□ -1.74
ATXN3-235ENST00000556082 LCA10Q71F78 164 aa4.16□□□□□ -1.74
ATXN3-235ENST00000556082 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
ATXN3-235ENST00000556082 RBM12B-AS1Q9P1G2 102 aa4.16□□□□□ -1.74
ATXN3-235ENST00000556082 LRP2P98164 4655 aa4.15□□□□□ -1.74
ATXN3-235ENST00000556082 S4R3F8 94 aa4.14□□□□□ -1.75
ATXN3-235ENST00000556082 UQCR11O14957 56 aa4.13□□□□□ -1.75
ATXN3-235ENST00000556082 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
ATXN3-235ENST00000556082 LPAP08519 4548 aa4.1□□□□□ -1.75
ATXN3-235ENST00000556082 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.75
ATXN3-235ENST00000556082 A8MU10 97 aa4.08□□□□□ -1.76
ATXN3-235ENST00000556082 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
ATXN3-235ENST00000556082 KRTAP4-1Q9BYQ7 146 aa4.08□□□□□ -1.76
ATXN3-235ENST00000556082 A0A1B0GU33 70 aa4.07□□□□□ -1.76
ATXN3-235ENST00000556082 CSAG1Q6PB30 78 aa4.07□□□□□ -1.76
ATXN3-235ENST00000556082 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
ATXN3-235ENST00000556082 H0YAA0 97 aa4.04□□□□□ -1.76
ATXN3-235ENST00000556082 KRTAP19-2Q3LHN2 52 aa4.04□□□□□ -1.76
ATXN3-235ENST00000556082 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
ATXN3-235ENST00000556082 PCLOQ9Y6V0 5065 aa4.01□□□□□ -1.77
ATXN3-235ENST00000556082 A6NN06 94 aa3.99□□□□□ -1.77
ATXN3-235ENST00000556082 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
ATXN3-235ENST00000556082 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
ATXN3-235ENST00000556082 HERC1Q15751 4861 aa3.97□□□□□ -1.77
ATXN3-235ENST00000556082 ADM2Q7Z4H4 148 aa3.97□□□□□ -1.77
ATXN3-235ENST00000556082 P0C880 135 aa3.96□□□□□ -1.78
ATXN3-235ENST00000556082 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
ATXN3-235ENST00000556082 M0QZ58 72 aa3.94□□□□□ -1.78
ATXN3-235ENST00000556082 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
ATXN3-235ENST00000556082 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
ATXN3-235ENST00000556082 K7ERS5 55 aa3.89□□□□□ -1.79
ATXN3-235ENST00000556082 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
ATXN3-235ENST00000556082 FLGP20930 4061 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-235ENST00000556082 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
ATXN3-235ENST00000556082 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
ATXN3-235ENST00000556082 A0A0D9SG42 100 aa3.83□□□□□ -1.8
ATXN3-235ENST00000556082 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
ATXN3-235ENST00000556082 CRIPTQ9P021 101 aa3.82□□□□□ -1.8
ATXN3-235ENST00000556082 R4GN34 69 aa3.81□□□□□ -1.8
ATXN3-235ENST00000556082 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
ATXN3-235ENST00000556082 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
ATXN3-235ENST00000556082 MUC2Q02817 5179 aa3.78□□□□□ -1.8
ATXN3-235ENST00000556082 MT1HP80294 61 aa3.78□□□□□ -1.8
ATXN3-235ENST00000556082 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
ATXN3-235ENST00000556082 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
ATXN3-235ENST00000556082 ROMO1P60602 79 aa3.76□□□□□ -1.81
ATXN3-235ENST00000556082 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
ATXN3-235ENST00000556082 RNF213Q63HN8 5207 aa3.73□□□□□ -1.81
ATXN3-235ENST00000556082 M0R2T5 61 aa3.71□□□□□ -1.82
ATXN3-235ENST00000556082 LINC01554Q52M75 96 aa3.71□□□□□ -1.82
ATXN3-235ENST00000556082 UBR4Q5T4S7 5183 aa3.7□□□□□ -1.82
ATXN3-235ENST00000556082 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
ATXN3-235ENST00000556082 SPRR2GQ9BYE4 73 aa3.69□□□□□ -1.82
ATXN3-235ENST00000556082 FAT4Q6V0I7 4981 aa3.67□□□□□ -1.82
ATXN3-235ENST00000556082 MT2AP02795 61 aa3.66□□□□□ -1.82
ATXN3-235ENST00000556082 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
ATXN3-235ENST00000556082 MT1FP04733 61 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms