RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
SRP54-206ENST00000555317 KRTAP3-1Q9BYR8 98 aa5.73□□□□□ -1.49
SRP54-206ENST00000555317 MP68P56378 58 aa5.72□□□□□ -1.49
SRP54-206ENST00000555317 CSAG1Q6PB30 78 aa5.71□□□□□ -1.5
SRP54-206ENST00000555317 SCGB1A1P11684 91 aa5.7□□□□□ -1.5
SRP54-206ENST00000555317 FAM236AA0A1B0GUQ0 79 aa5.69□□□□□ -1.5
SRP54-206ENST00000555317 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
SRP54-206ENST00000555317 LCA10Q71F78 164 aa5.69□□□□□ -1.5
SRP54-206ENST00000555317 LINC00208Q96KT6 92 aa5.69□□□□□ -1.5
SRP54-206ENST00000555317 K7ERU9 68 aa5.68□□□□□ -1.5
SRP54-206ENST00000555317 OCR1Q9BZK8 76 aa5.68□□□□□ -1.5
SRP54-206ENST00000555317 SSPOA2VEC9 5147 aa5.64□□□□□ -1.51
SRP54-206ENST00000555317 A8MUN3 132 aa5.62□□□□□ -1.51
SRP54-206ENST00000555317 H3BPC8 53 aa5.62□□□□□ -1.51
SRP54-206ENST00000555317 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
SRP54-206ENST00000555317 IMUPQ9GZP8 106 aa5.61□□□□□ -1.51
SRP54-206ENST00000555317 KLKP1Q107X0 134 aa5.6□□□□□ -1.51
SRP54-206ENST00000555317 NDUFC1O43677 76 aa5.59□□□□□ -1.51
SRP54-206ENST00000555317 MT-ATP8P03928 68 aa5.58□□□□□ -1.52
SRP54-206ENST00000555317 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
SRP54-206ENST00000555317 SMIM20Q8N5G0 67 aa5.56□□□□□ -1.52
SRP54-206ENST00000555317 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
SRP54-206ENST00000555317 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
SRP54-206ENST00000555317 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
SRP54-206ENST00000555317 KRTAP19-6Q3LI70 58 aa5.47□□□□□ -1.53
SRP54-206ENST00000555317 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
SRP54-206ENST00000555317 CRIPTQ9P021 101 aa5.47□□□□□ -1.53
SRP54-206ENST00000555317 H0YAA0 97 aa5.45□□□□□ -1.54
SRP54-206ENST00000555317 Q5VV11 94 aa5.45□□□□□ -1.54
SRP54-206ENST00000555317 SPRR2GQ9BYE4 73 aa5.45□□□□□ -1.54
SRP54-206ENST00000555317 ADM2Q7Z4H4 148 aa5.43□□□□□ -1.54
SRP54-206ENST00000555317 KRTAP9-7A8MTY7 169 aa5.42□□□□□ -1.54
SRP54-206ENST00000555317 ACYP2P14621 99 aa5.4□□□□□ -1.54
SRP54-206ENST00000555317 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
SRP54-206ENST00000555317 C20orf197Q8N268 126 aa5.39□□□□□ -1.55
SRP54-206ENST00000555317 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
SRP54-206ENST00000555317 SNURFQ9Y675 71 aa5.38□□□□□ -1.55
SRP54-206ENST00000555317 SERP2Q8N6R1 65 aa5.36□□□□□ -1.55
SRP54-206ENST00000555317 SPTSSBQ8NFR3 76 aa5.36□□□□□ -1.55
SRP54-206ENST00000555317 CHKB-CPT1BH3BT56 60 aa5.35□□□□□ -1.55
SRP54-206ENST00000555317 MT1BP07438 61 aa5.35□□□□□ -1.55
SRP54-206ENST00000555317 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
SRP54-206ENST00000555317 A6NN06 94 aa5.33□□□□□ -1.56
SRP54-206ENST00000555317 R4GN34 69 aa5.31□□□□□ -1.56
SRP54-206ENST00000555317 SPANXA2-OT1Q8N9U9 137 aa5.29□□□□□ -1.56
SRP54-206ENST00000555317 P0C880 135 aa5.28□□□□□ -1.56
SRP54-206ENST00000555317 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
SRP54-206ENST00000555317 M0QZ58 72 aa5.27□□□□□ -1.57
SRP54-206ENST00000555317 MACF1Q9UPN3 7388 aaKnown RBP5.26□□□□□ -1.57
SRP54-206ENST00000555317 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
SRP54-206ENST00000555317 PLAC4Q8WY50 150 aa5.23□□□□□ -1.57
SRP54-206ENST00000555317 COX7CP15954 63 aa5.22□□□□□ -1.57
SRP54-206ENST00000555317 H3BS24 57 aa5.21□□□□□ -1.58
SRP54-206ENST00000555317 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
SRP54-206ENST00000555317 LINC01554Q52M75 96 aa5.2□□□□□ -1.58
SRP54-206ENST00000555317 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
SRP54-206ENST00000555317 COA5Q86WW8 74 aa5.15□□□□□ -1.59
SRP54-206ENST00000555317 ANAPC13Q9BS18 74 aa5.14□□□□□ -1.59
SRP54-206ENST00000555317 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
SRP54-206ENST00000555317 H7BZZ5 65 aa5.09□□□□□ -1.59
SRP54-206ENST00000555317 SEC61GP60059 68 aa5.09□□□□□ -1.59
SRP54-206ENST00000555317 MT1XP80297 61 aa5.06□□□□□ -1.6
SRP54-206ENST00000555317 CYSTM1Q9H1C7 97 aa5.06□□□□□ -1.6
SRP54-206ENST00000555317 SERP1Q9Y6X1 66 aa5.06□□□□□ -1.6
SRP54-206ENST00000555317 CCDC179H3BU77 68 aa4.98□□□□□ -1.61
SRP54-206ENST00000555317 KRTAP13-4Q3LI77 160 aa4.96□□□□□ -1.62
SRP54-206ENST00000555317 ATP5EP56381 51 aaPredicted RBP4.95□□□□□ -1.62
SRP54-206ENST00000555317 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
SRP54-206ENST00000555317 MUC12Q9UKN1 5478 aa4.94□□□□□ -1.62
SRP54-206ENST00000555317 A0A1B0GU33 70 aa4.93□□□□□ -1.62
SRP54-206ENST00000555317 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
SRP54-206ENST00000555317 CAMK2N1Q7Z7J9 78 aa4.93□□□□□ -1.62
SRP54-206ENST00000555317 KMT2DO14686 5537 aa4.92□□□□□ -1.62
SRP54-206ENST00000555317 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
SRP54-206ENST00000555317 A0A0D9SG42 100 aa4.91□□□□□ -1.62
SRP54-206ENST00000555317 A0A1B0GU69 56 aa4.91□□□□□ -1.62
SRP54-206ENST00000555317 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
SRP54-206ENST00000555317 NEBP20929 6669 aa4.88□□□□□ -1.63
SRP54-206ENST00000555317 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
SRP54-206ENST00000555317 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
SRP54-206ENST00000555317 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
SRP54-206ENST00000555317 TMEM258P61165 79 aa4.85□□□□□ -1.63
SRP54-206ENST00000555317 PRR15LQ9BU68 103 aa4.85□□□□□ -1.63
SRP54-206ENST00000555317 SPINT4Q6UDR6 99 aa4.84□□□□□ -1.63
SRP54-206ENST00000555317 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
SRP54-206ENST00000555317 SMIM26A0A096LP01 95 aa4.82□□□□□ -1.64
SRP54-206ENST00000555317 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
SRP54-206ENST00000555317 SPRR2EP22531 72 aa4.77□□□□□ -1.65
SRP54-206ENST00000555317 SPRR2BP35325 72 aa4.77□□□□□ -1.65
SRP54-206ENST00000555317 SPRR2AP35326 72 aa4.77□□□□□ -1.65
SRP54-206ENST00000555317 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
SRP54-206ENST00000555317 LINC01558Q9Y6Z2 57 aa4.74□□□□□ -1.65
SRP54-206ENST00000555317 KRTAP20-1Q3LI63 56 aa4.73□□□□□ -1.65
SRP54-206ENST00000555317 A8MU10 97 aa4.71□□□□□ -1.66
SRP54-206ENST00000555317 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
SRP54-206ENST00000555317 UQCR11O14957 56 aa4.64□□□□□ -1.67
SRP54-206ENST00000555317 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
SRP54-206ENST00000555317 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
SRP54-206ENST00000555317 SPRR2DP22532 72 aa4.61□□□□□ -1.67
SRP54-206ENST00000555317 V9GYY9 64 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms