RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 FAM236CP0DP71 79 aa5.35□□□□□ -1.55
SHMT2-215ENST00000554656 USH2AO75445 5202 aa5.34□□□□□ -1.55
SHMT2-215ENST00000554656 IGKV2D-30A0A075B6S6 120 aa5.32□□□□□ -1.56
SHMT2-215ENST00000554656 MT2AP02795 61 aa5.32□□□□□ -1.56
SHMT2-215ENST00000554656 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
SHMT2-215ENST00000554656 MT1FP04733 61 aa5.29□□□□□ -1.56
SHMT2-215ENST00000554656 LCE2BO14633 110 aa5.28□□□□□ -1.56
SHMT2-215ENST00000554656 HRES1P13985 223 aa5.28□□□□□ -1.56
SHMT2-215ENST00000554656 SPINK7P58062 85 aa5.27□□□□□ -1.57
SHMT2-215ENST00000554656 MPLKIPQ8TAP9 179 aa5.27□□□□□ -1.57
SHMT2-215ENST00000554656 SERP1Q9Y6X1 66 aa5.26□□□□□ -1.57
SHMT2-215ENST00000554656 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
SHMT2-215ENST00000554656 RPS28P62857 69 aaKnown RBP5.25□□□□□ -1.57
SHMT2-215ENST00000554656 KRTAP9-3Q9BYQ3 159 aa5.25□□□□□ -1.57
SHMT2-215ENST00000554656 KRTAP19-1Q8IUB9 90 aa5.24□□□□□ -1.57
SHMT2-215ENST00000554656 A8MUN3 132 aa5.23□□□□□ -1.57
SHMT2-215ENST00000554656 DMAC1Q96GE9 116 aa5.23□□□□□ -1.57
SHMT2-215ENST00000554656 ACYP2P14621 99 aa5.21□□□□□ -1.58
SHMT2-215ENST00000554656 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
SHMT2-215ENST00000554656 RBM12B-AS1Q9P1G2 102 aa5.18□□□□□ -1.58
SHMT2-215ENST00000554656 C4orf26Q17RF5 130 aa5.17□□□□□ -1.58
SHMT2-215ENST00000554656 COA5Q86WW8 74 aa5.16□□□□□ -1.58
SHMT2-215ENST00000554656 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
SHMT2-215ENST00000554656 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
SHMT2-215ENST00000554656 CHKB-CPT1BH3BT56 60 aa5.09□□□□□ -1.59
SHMT2-215ENST00000554656 KRTAP19-6Q3LI70 58 aa5.09□□□□□ -1.59
SHMT2-215ENST00000554656 SPTSSBQ8NFR3 76 aa5.07□□□□□ -1.6
SHMT2-215ENST00000554656 MACF1Q9UPN3 7388 aaKnown RBP5.06□□□□□ -1.6
SHMT2-215ENST00000554656 H1FX-AS1Q4G0G2 97 aa5.05□□□□□ -1.6
SHMT2-215ENST00000554656 V9GYY9 64 aa5.05□□□□□ -1.6
SHMT2-215ENST00000554656 Q1T7F1 81 aa5.02□□□□□ -1.61
SHMT2-215ENST00000554656 S4R3F8 94 aa5□□□□□ -1.61
SHMT2-215ENST00000554656 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
SHMT2-215ENST00000554656 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
SHMT2-215ENST00000554656 LCA10Q71F78 164 aa4.96□□□□□ -1.62
SHMT2-215ENST00000554656 KRTAP3-3Q9BYR6 98 aa4.95□□□□□ -1.62
SHMT2-215ENST00000554656 KRTAP6-3Q3LI67 103 aa4.93□□□□□ -1.62
SHMT2-215ENST00000554656 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
SHMT2-215ENST00000554656 CSAG1Q6PB30 78 aa4.91□□□□□ -1.62
SHMT2-215ENST00000554656 A0A1B0GU69 56 aa4.88□□□□□ -1.63
SHMT2-215ENST00000554656 SEC61GP60059 68 aa4.88□□□□□ -1.63
SHMT2-215ENST00000554656 H0YAA0 97 aa4.85□□□□□ -1.63
SHMT2-215ENST00000554656 PSPHP1O15172 72 aa4.85□□□□□ -1.63
SHMT2-215ENST00000554656 Q5VV11 94 aa4.85□□□□□ -1.63
SHMT2-215ENST00000554656 MT1BP07438 61 aa4.81□□□□□ -1.64
SHMT2-215ENST00000554656 KRTAP3-2Q9BYR7 98 aa4.77□□□□□ -1.65
SHMT2-215ENST00000554656 A6NN06 94 aa4.76□□□□□ -1.65
SHMT2-215ENST00000554656 UQCR11O14957 56 aa4.76□□□□□ -1.65
SHMT2-215ENST00000554656 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
SHMT2-215ENST00000554656 A0A1B0GU33 70 aa4.74□□□□□ -1.65
SHMT2-215ENST00000554656 A6NED7 52 aa4.74□□□□□ -1.65
SHMT2-215ENST00000554656 ADM2Q7Z4H4 148 aa4.74□□□□□ -1.65
SHMT2-215ENST00000554656 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
SHMT2-215ENST00000554656 NEBP20929 6669 aa4.71□□□□□ -1.66
SHMT2-215ENST00000554656 P0C880 135 aa4.71□□□□□ -1.66
SHMT2-215ENST00000554656 KRTAP10-5P60370 271 aa4.71□□□□□ -1.66
SHMT2-215ENST00000554656 SPATA8Q6RVD6 105 aa4.7□□□□□ -1.66
SHMT2-215ENST00000554656 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
SHMT2-215ENST00000554656 MUC12Q9UKN1 5478 aa4.69□□□□□ -1.66
SHMT2-215ENST00000554656 MIR22HGQ0VDD5 57 aa4.68□□□□□ -1.66
SHMT2-215ENST00000554656 M0QZ58 72 aa4.67□□□□□ -1.66
SHMT2-215ENST00000554656 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
SHMT2-215ENST00000554656 KRTAP20-1Q3LI63 56 aa4.65□□□□□ -1.67
SHMT2-215ENST00000554656 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
SHMT2-215ENST00000554656 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
SHMT2-215ENST00000554656 R4GN34 69 aa4.61□□□□□ -1.67
SHMT2-215ENST00000554656 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
SHMT2-215ENST00000554656 PRO0628Q9UI54 55 aa4.6□□□□□ -1.67
SHMT2-215ENST00000554656 KMT2DO14686 5537 aa4.6□□□□□ -1.67
SHMT2-215ENST00000554656 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
SHMT2-215ENST00000554656 A8MU10 97 aa4.55□□□□□ -1.68
SHMT2-215ENST00000554656 K7ERS5 55 aa4.52□□□□□ -1.69
SHMT2-215ENST00000554656 A0A0D9SG42 100 aa4.49□□□□□ -1.69
SHMT2-215ENST00000554656 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
SHMT2-215ENST00000554656 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
SHMT2-215ENST00000554656 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
SHMT2-215ENST00000554656 MT1XP80297 61 aa4.46□□□□□ -1.7
SHMT2-215ENST00000554656 SPRR2FQ96RM1 72 aa4.46□□□□□ -1.7
SHMT2-215ENST00000554656 LINC01554Q52M75 96 aa4.45□□□□□ -1.7
SHMT2-215ENST00000554656 SPRR2EP22531 72 aa4.44□□□□□ -1.7
SHMT2-215ENST00000554656 SPRR2BP35325 72 aa4.44□□□□□ -1.7
SHMT2-215ENST00000554656 SPRR2AP35326 72 aa4.44□□□□□ -1.7
SHMT2-215ENST00000554656 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
SHMT2-215ENST00000554656 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
SHMT2-215ENST00000554656 SPINT4Q6UDR6 99 aa4.41□□□□□ -1.7
SHMT2-215ENST00000554656 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
SHMT2-215ENST00000554656 PRO2289Q9P1D8 64 aa4.38□□□□□ -1.71
SHMT2-215ENST00000554656 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
SHMT2-215ENST00000554656 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
SHMT2-215ENST00000554656 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
SHMT2-215ENST00000554656 KRTAP4-8Q9BYQ9 185 aa4.33□□□□□ -1.72
SHMT2-215ENST00000554656 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
SHMT2-215ENST00000554656 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
SHMT2-215ENST00000554656 ROMO1P60602 79 aa4.3□□□□□ -1.72
SHMT2-215ENST00000554656 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
SHMT2-215ENST00000554656 SPRR2DP22532 72 aa4.28□□□□□ -1.72
SHMT2-215ENST00000554656 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
SHMT2-215ENST00000554656 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
SHMT2-215ENST00000554656 KRTAP10-7P60409 375 aaPredicted RBP4.25□□□□□ -1.73
SHMT2-215ENST00000554656 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms