RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 COL6A5A8TX70 2615 aa1.79□□□□□ -2.12
SEC23A-207ENST00000554615 TLN2Q9Y4G6 2542 aa1.79□□□□□ -2.12
SEC23A-207ENST00000554615 NOTCH2Q04721 2471 aa1.78□□□□□ -2.12
SEC23A-207ENST00000554615 SONP18583 2426 aaKnown RBP1.78□□□□□ -2.12
SEC23A-207ENST00000554615 DEFB116Q30KQ4 102 aa1.78□□□□□ -2.12
SEC23A-207ENST00000554615 SPG11Q96JI7 2443 aa1.78□□□□□ -2.12
SEC23A-207ENST00000554615 ABCA13Q86UQ4 5058 aa1.78□□□□□ -2.12
SEC23A-207ENST00000554615 UBE2DNLQ8IWF7 75 aa1.77□□□□□ -2.13
SEC23A-207ENST00000554615 RPL37P61927 97 aaKnown RBP1.77□□□□□ -2.13
SEC23A-207ENST00000554615 LPAP08519 4548 aa1.76□□□□□ -2.13
SEC23A-207ENST00000554615 COX6B2Q6YFQ2 88 aa1.76□□□□□ -2.13
SEC23A-207ENST00000554615 IGLV9-49A0A0B4J1Y8 123 aa1.75□□□□□ -2.13
SEC23A-207ENST00000554615 PRB2P02812 416 aaPredicted RBP1.75□□□□□ -2.13
SEC23A-207ENST00000554615 KRTAP5-4Q6L8H1 288 aa1.75□□□□□ -2.13
SEC23A-207ENST00000554615 PRR15LQ9BU68 103 aa1.75□□□□□ -2.13
SEC23A-207ENST00000554615 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
SEC23A-207ENST00000554615 MYO9AB2RTY4 2548 aa1.75□□□□□ -2.13
SEC23A-207ENST00000554615 TPRXLQ17RH7 258 aa1.74□□□□□ -2.13
SEC23A-207ENST00000554615 ACACBO00763 2458 aa1.74□□□□□ -2.13
SEC23A-207ENST00000554615 FASNP49327 2511 aaKnown RBP1.74□□□□□ -2.13
SEC23A-207ENST00000554615 HIVEP2P31629 2446 aa1.74□□□□□ -2.13
SEC23A-207ENST00000554615 LINC00304Q8N9R0 145 aa1.74□□□□□ -2.13
SEC23A-207ENST00000554615 BRK1Q8WUW1 75 aa1.74□□□□□ -2.13
SEC23A-207ENST00000554615 JMJD1CQ15652 2540 aa1.73□□□□□ -2.13
SEC23A-207ENST00000554615 RP1L1Q8IWN7 2480 aaPredicted RBP1.73□□□□□ -2.13
SEC23A-207ENST00000554615 KRTAP23-1A1A580 65 aa1.73□□□□□ -2.13
SEC23A-207ENST00000554615 H1FX-AS1Q4G0G2 97 aa1.73□□□□□ -2.13
SEC23A-207ENST00000554615 RBM12B-AS1Q9P1G2 102 aa1.73□□□□□ -2.13
SEC23A-207ENST00000554615 PSPHP1O15172 72 aa1.72□□□□□ -2.13
SEC23A-207ENST00000554615 UQCR11O14957 56 aa1.71□□□□□ -2.14
SEC23A-207ENST00000554615 SEC61GP60059 68 aa1.71□□□□□ -2.14
SEC23A-207ENST00000554615 CCDC168Q8NDH2 2452 aa1.71□□□□□ -2.14
SEC23A-207ENST00000554615 CHKB-CPT1BH3BT56 60 aa1.71□□□□□ -2.14
SEC23A-207ENST00000554615 TYMSOSQ8TAI1 123 aa1.71□□□□□ -2.14
SEC23A-207ENST00000554615 EPPK1P58107 5090 aaKnown RBP1.71□□□□□ -2.14
SEC23A-207ENST00000554615 KRTAP13-4Q3LI77 160 aa1.7□□□□□ -2.14
SEC23A-207ENST00000554615 PCOTHQ58A44 107 aa1.7□□□□□ -2.14
SEC23A-207ENST00000554615 SPTSSBQ8NFR3 76 aa1.7□□□□□ -2.14
SEC23A-207ENST00000554615 Q8N1X5 172 aa1.7□□□□□ -2.14
SEC23A-207ENST00000554615 SETD2Q9BYW2 2564 aaPredicted RBP1.7□□□□□ -2.14
SEC23A-207ENST00000554615 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
SEC23A-207ENST00000554615 HMCN2Q8NDA2 5059 aa1.69□□□□□ -2.14
SEC23A-207ENST00000554615 A0A1B0GU69 56 aa1.68□□□□□ -2.14
SEC23A-207ENST00000554615 ATRQ13535 2644 aa1.68□□□□□ -2.14
SEC23A-207ENST00000554615 SPRR5A0A1B0GTR4 108 aa1.67□□□□□ -2.14
SEC23A-207ENST00000554615 KRTAP25-1Q3LHN0 102 aa1.67□□□□□ -2.14
SEC23A-207ENST00000554615 FLG2Q5D862 2391 aaPredicted RBP1.67□□□□□ -2.14
SEC23A-207ENST00000554615 A6NED7 52 aa1.66□□□□□ -2.14
SEC23A-207ENST00000554615 ACANP16112 2415 aa1.66□□□□□ -2.14
SEC23A-207ENST00000554615 ROMO1P60602 79 aa1.66□□□□□ -2.14
SEC23A-207ENST00000554615 STAB2Q8WWQ8 2551 aa1.65□□□□□ -2.14
SEC23A-207ENST00000554615 KRTAP12-1P59990 96 aa1.65□□□□□ -2.14
SEC23A-207ENST00000554615 PRR4Q16378 134 aa1.65□□□□□ -2.14
SEC23A-207ENST00000554615 KRTAP15-1Q3LI76 137 aa1.65□□□□□ -2.14
SEC23A-207ENST00000554615 RETNLBQ9BQ08 111 aa1.65□□□□□ -2.15
SEC23A-207ENST00000554615 KIAA1109Q2LD37 5005 aa1.65□□□□□ -2.15
SEC23A-207ENST00000554615 A0A1B0GU33 70 aa1.64□□□□□ -2.15
SEC23A-207ENST00000554615 M0QZ58 72 aa1.63□□□□□ -2.15
SEC23A-207ENST00000554615 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
SEC23A-207ENST00000554615 STAB1Q9NY15 2570 aa1.63□□□□□ -2.15
SEC23A-207ENST00000554615 LINC01554Q52M75 96 aa1.63□□□□□ -2.15
SEC23A-207ENST00000554615 KRTAP4-1Q9BYQ7 146 aa1.62□□□□□ -2.15
SEC23A-207ENST00000554615 ADM2Q7Z4H4 148 aa1.61□□□□□ -2.15
SEC23A-207ENST00000554615 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
SEC23A-207ENST00000554615 CRIPTQ9P021 101 aa1.61□□□□□ -2.15
SEC23A-207ENST00000554615 SPRR2GQ9BYE4 73 aa1.6□□□□□ -2.15
SEC23A-207ENST00000554615 KRTAP12-2P59991 146 aa1.6□□□□□ -2.15
SEC23A-207ENST00000554615 S4R3F8 94 aa1.6□□□□□ -2.15
SEC23A-207ENST00000554615 F8P00451 2351 aa1.59□□□□□ -2.15
SEC23A-207ENST00000554615 Q5VSD8 79 aa1.59□□□□□ -2.15
SEC23A-207ENST00000554615 KRTAP19-8Q3LI54 63 aa1.59□□□□□ -2.16
SEC23A-207ENST00000554615 MTORP42345 2549 aa1.58□□□□□ -2.16
SEC23A-207ENST00000554615 P0C880 135 aa1.58□□□□□ -2.16
SEC23A-207ENST00000554615 FAT4Q6V0I7 4981 aa1.57□□□□□ -2.16
SEC23A-207ENST00000554615 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
SEC23A-207ENST00000554615 CSAG1Q6PB30 78 aa1.56□□□□□ -2.16
SEC23A-207ENST00000554615 C10orf95Q9H7T3 257 aa1.55□□□□□ -2.16
SEC23A-207ENST00000554615 PRAC1Q96KF2 57 aa1.55□□□□□ -2.16
SEC23A-207ENST00000554615 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.16
SEC23A-207ENST00000554615 C9orf92A6NGG3 77 aa1.52□□□□□ -2.17
SEC23A-207ENST00000554615 PP632Q6XCG6 107 aa1.52□□□□□ -2.17
SEC23A-207ENST00000554615 UBR4Q5T4S7 5183 aa1.52□□□□□ -2.17
SEC23A-207ENST00000554615 MGAM2Q2M2H8 2515 aa1.51□□□□□ -2.17
SEC23A-207ENST00000554615 NOTCH1P46531 2555 aa1.5□□□□□ -2.17
SEC23A-207ENST00000554615 SEC61BP60468 96 aaKnown RBP1.49□□□□□ -2.17
SEC23A-207ENST00000554615 SMR3BP02814 79 aaPredicted RBP1.48□□□□□ -2.17
SEC23A-207ENST00000554615 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
SEC23A-207ENST00000554615 KRTAP8-1Q8IUC2 63 aa1.48□□□□□ -2.17
SEC23A-207ENST00000554615 MT1HP80294 61 aa1.47□□□□□ -2.17
SEC23A-207ENST00000554615 MT1BP07438 61 aa1.46□□□□□ -2.18
SEC23A-207ENST00000554615 KRTAP10-12P60413 245 aa1.46□□□□□ -2.18
SEC23A-207ENST00000554615 KRTAP10-5P60370 271 aa1.46□□□□□ -2.18
SEC23A-207ENST00000554615 RNF213Q63HN8 5207 aa1.45□□□□□ -2.18
SEC23A-207ENST00000554615 MT2AP02795 61 aa1.44□□□□□ -2.18
SEC23A-207ENST00000554615 MT1XP80297 61 aa1.44□□□□□ -2.18
SEC23A-207ENST00000554615 SSPOA2VEC9 5147 aa1.43□□□□□ -2.18
SEC23A-207ENST00000554615 K7ERS5 55 aa1.43□□□□□ -2.18
SEC23A-207ENST00000554615 MT1FP04733 61 aa1.42□□□□□ -2.18
SEC23A-207ENST00000554615 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
SEC23A-207ENST00000554615 USH2AO75445 5202 aa1.4□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms