RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 FAM236AA0A1B0GUQ0 79 aa13.22□□□□□ -0.29
PCNX1-206ENST00000554292 FAM236BA0A1B0GV22 79 aa13.22□□□□□ -0.29
PCNX1-206ENST00000554292 USH2AO75445 5202 aa13.19□□□□□ -0.3
PCNX1-206ENST00000554292 KRTAP3-3Q9BYR6 98 aa13.18□□□□□ -0.3
PCNX1-206ENST00000554292 TRAV7A0A075B6U4 112 aa13.15□□□□□ -0.3
PCNX1-206ENST00000554292 NDUFC1O43677 76 aa13.13□□□□□ -0.31
PCNX1-206ENST00000554292 DMAC1Q96GE9 116 aa12.99□□□□□ -0.33
PCNX1-206ENST00000554292 SSPOA2VEC9 5147 aa12.98□□□□□ -0.33
PCNX1-206ENST00000554292 H0YAA0 97 aa12.91□□□□□ -0.34
PCNX1-206ENST00000554292 KRTAP19-1Q8IUB9 90 aa12.9□□□□□ -0.34
PCNX1-206ENST00000554292 SERP2Q8N6R1 65 aa12.84□□□□□ -0.35
PCNX1-206ENST00000554292 CRIPTQ9P021 101 aa12.84□□□□□ -0.35
PCNX1-206ENST00000554292 SPRR2GQ9BYE4 73 aa12.83□□□□□ -0.36
PCNX1-206ENST00000554292 KRTAP19-6Q3LI70 58 aa12.79□□□□□ -0.36
PCNX1-206ENST00000554292 SNURFQ9Y675 71 aa12.79□□□□□ -0.36
PCNX1-206ENST00000554292 ACYP2P14621 99 aa12.78□□□□□ -0.36
PCNX1-206ENST00000554292 ADM2Q7Z4H4 148 aa12.74□□□□□ -0.37
PCNX1-206ENST00000554292 C20orf197Q8N268 126 aa12.74□□□□□ -0.37
PCNX1-206ENST00000554292 Q5VV11 94 aa12.7□□□□□ -0.38
PCNX1-206ENST00000554292 FCGBPQ9Y6R7 5405 aaPredicted RBP12.69□□□□□ -0.38
PCNX1-206ENST00000554292 KRTAP19-8Q3LI54 63 aa12.68□□□□□ -0.38
PCNX1-206ENST00000554292 SPANXA2-OT1Q8N9U9 137 aa12.64□□□□□ -0.39
PCNX1-206ENST00000554292 SPTSSBQ8NFR3 76 aa12.62□□□□□ -0.39
PCNX1-206ENST00000554292 MT1BP07438 61 aa12.6□□□□□ -0.39
PCNX1-206ENST00000554292 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.57□□□□□ -0.4
PCNX1-206ENST00000554292 CHKB-CPT1BH3BT56 60 aa12.57□□□□□ -0.4
PCNX1-206ENST00000554292 COX7CP15954 63 aa12.53□□□□□ -0.4
PCNX1-206ENST00000554292 P0C880 135 aa12.46□□□□□ -0.41
PCNX1-206ENST00000554292 R4GN34 69 aa12.44□□□□□ -0.42
PCNX1-206ENST00000554292 A6NN06 94 aa12.39□□□□□ -0.43
PCNX1-206ENST00000554292 KRTAP3-2Q9BYR7 98 aa12.39□□□□□ -0.43
PCNX1-206ENST00000554292 KRTAP9-7A8MTY7 169 aa12.34□□□□□ -0.43
PCNX1-206ENST00000554292 M0QZ58 72 aa12.33□□□□□ -0.44
PCNX1-206ENST00000554292 ANAPC13Q9BS18 74 aa12.3□□□□□ -0.44
PCNX1-206ENST00000554292 KRTAP10-5P60370 271 aa12.27□□□□□ -0.45
PCNX1-206ENST00000554292 MACF1Q9UPN3 7388 aaKnown RBP12.25□□□□□ -0.45
PCNX1-206ENST00000554292 H7BZZ5 65 aa12.24□□□□□ -0.45
PCNX1-206ENST00000554292 COA5Q86WW8 74 aa12.24□□□□□ -0.45
PCNX1-206ENST00000554292 PLAC4Q8WY50 150 aa12.19□□□□□ -0.46
PCNX1-206ENST00000554292 CYSTM1Q9H1C7 97 aa12.18□□□□□ -0.46
PCNX1-206ENST00000554292 LINC01554Q52M75 96 aa12.12□□□□□ -0.47
PCNX1-206ENST00000554292 PRO2289Q9P1D8 64 aa12.06□□□□□ -0.48
PCNX1-206ENST00000554292 SYNE2Q8WXH0 6885 aaKnown RBP11.98□□□□□ -0.49
PCNX1-206ENST00000554292 CCDC179H3BU77 68 aa11.97□□□□□ -0.49
PCNX1-206ENST00000554292 SEC61GP60059 68 aa11.97□□□□□ -0.49
PCNX1-206ENST00000554292 MT1XP80297 61 aa11.91□□□□□ -0.5
PCNX1-206ENST00000554292 KRTAP6-3Q3LI67 103 aa11.91□□□□□ -0.5
PCNX1-206ENST00000554292 SERP1Q9Y6X1 66 aa11.91□□□□□ -0.5
PCNX1-206ENST00000554292 ATP5EP56381 51 aaPredicted RBP11.85□□□□□ -0.51
PCNX1-206ENST00000554292 KRTAP13-4Q3LI77 160 aa11.77□□□□□ -0.53
PCNX1-206ENST00000554292 A0A1B0GU33 70 aa11.65□□□□□ -0.54
PCNX1-206ENST00000554292 A0A1B0GU69 56 aa11.64□□□□□ -0.55
PCNX1-206ENST00000554292 TMEM258P61165 79 aa11.64□□□□□ -0.55
PCNX1-206ENST00000554292 KRTAP12-2P59991 146 aa11.61□□□□□ -0.55
PCNX1-206ENST00000554292 SPATA8Q6RVD6 105 aa11.53□□□□□ -0.56
PCNX1-206ENST00000554292 KRTAP5-9P26371 169 aa11.52□□□□□ -0.57
PCNX1-206ENST00000554292 A0A0D9SG42 100 aa11.51□□□□□ -0.57
PCNX1-206ENST00000554292 CAMK2N1Q7Z7J9 78 aa11.51□□□□□ -0.57
PCNX1-206ENST00000554292 PRR15LQ9BU68 103 aa11.46□□□□□ -0.57
PCNX1-206ENST00000554292 KRTAP8-1Q8IUC2 63 aa11.38□□□□□ -0.59
PCNX1-206ENST00000554292 SMIM26A0A096LP01 95 aa11.37□□□□□ -0.59
PCNX1-206ENST00000554292 KRTAP10-7P60409 375 aaPredicted RBP11.36□□□□□ -0.59
PCNX1-206ENST00000554292 LINC01558Q9Y6Z2 57 aa11.35□□□□□ -0.59
PCNX1-206ENST00000554292 KMT2DO14686 5537 aa11.34□□□□□ -0.59
PCNX1-206ENST00000554292 KRTAP10-12P60413 245 aa11.34□□□□□ -0.59
PCNX1-206ENST00000554292 SPINT4Q6UDR6 99 aa11.34□□□□□ -0.59
PCNX1-206ENST00000554292 MUC12Q9UKN1 5478 aa11.29□□□□□ -0.6
PCNX1-206ENST00000554292 NEBP20929 6669 aa11.28□□□□□ -0.6
PCNX1-206ENST00000554292 SPRR2FQ96RM1 72 aa11.28□□□□□ -0.6
PCNX1-206ENST00000554292 KRTAP12-1P59990 96 aa11.27□□□□□ -0.61
PCNX1-206ENST00000554292 KRTAP4-8A0A0G2JLE6 195 aa11.23□□□□□ -0.61
PCNX1-206ENST00000554292 KRTAP4-8Q9BYQ9 185 aa11.23□□□□□ -0.61
PCNX1-206ENST00000554292 A8MU10 97 aa11.17□□□□□ -0.62
PCNX1-206ENST00000554292 MDN1Q9NU22 5596 aa11.06□□□□□ -0.64
PCNX1-206ENST00000554292 UQCR11O14957 56 aa11.05□□□□□ -0.64
PCNX1-206ENST00000554292 SPRR2EP22531 72 aa11.03□□□□□ -0.64
PCNX1-206ENST00000554292 SPRR2BP35325 72 aa11.03□□□□□ -0.64
PCNX1-206ENST00000554292 SPRR2AP35326 72 aa11.03□□□□□ -0.64
PCNX1-206ENST00000554292 V9GYY9 64 aa10.99□□□□□ -0.65
PCNX1-206ENST00000554292 LCE1AQ5T7P2 110 aa10.9□□□□□ -0.66
PCNX1-206ENST00000554292 KRTAP20-1Q3LI63 56 aa10.87□□□□□ -0.67
PCNX1-206ENST00000554292 Q1T7F1 81 aa10.85□□□□□ -0.67
PCNX1-206ENST00000554292 PCP4P48539 62 aa10.82□□□□□ -0.68
PCNX1-206ENST00000554292 MIR22HGQ0VDD5 57 aa10.8□□□□□ -0.68
PCNX1-206ENST00000554292 PSPHP1O15172 72 aa10.78□□□□□ -0.68
PCNX1-206ENST00000554292 C10orf95Q9H7T3 257 aa10.72□□□□□ -0.69
PCNX1-206ENST00000554292 TNP1P09430 55 aa10.71□□□□□ -0.69
PCNX1-206ENST00000554292 KRTAP2-3P0C7H8 128 aa10.69□□□□□ -0.7
PCNX1-206ENST00000554292 KRTAP2-4Q9BYR9 128 aa10.69□□□□□ -0.7
PCNX1-206ENST00000554292 SPRR2DP22532 72 aa10.66□□□□□ -0.7
PCNX1-206ENST00000554292 RPS28P62857 69 aaKnown RBP10.63□□□□□ -0.71
PCNX1-206ENST00000554292 KRTAP19-7Q3SYF9 63 aa10.63□□□□□ -0.71
PCNX1-206ENST00000554292 K7ERS5 55 aa10.62□□□□□ -0.71
PCNX1-206ENST00000554292 MT1EP04732 61 aa10.54□□□□□ -0.72
PCNX1-206ENST00000554292 A6NED7 52 aa10.49□□□□□ -0.73
PCNX1-206ENST00000554292 KRTAP19-5Q3LI72 72 aa10.48□□□□□ -0.73
PCNX1-206ENST00000554292 LCE3AQ5TA76 89 aa10.44□□□□□ -0.74
PCNX1-206ENST00000554292 KRTAP19-3Q7Z4W3 81 aa10.4□□□□□ -0.74
PCNX1-206ENST00000554292 KRTAP2-2Q9BYT5 123 aa10.37□□□□□ -0.75
PCNX1-206ENST00000554292 KRTAP2-1Q9BYU5 128 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms