RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 LCE2CQ5TA81 110 aa5.47□□□□□ -1.53
PABPN1-203ENST00000553960 SMIM26A0A096LP01 95 aa5.43□□□□□ -1.54
PABPN1-203ENST00000553960 LCE2AQ5TA79 106 aaPredicted RBP5.43□□□□□ -1.54
PABPN1-203ENST00000553960 SPTSSBQ8NFR3 76 aa5.42□□□□□ -1.54
PABPN1-203ENST00000553960 Q1T7F1 81 aa5.38□□□□□ -1.55
PABPN1-203ENST00000553960 V9GYY9 64 aa5.38□□□□□ -1.55
PABPN1-203ENST00000553960 CHKB-CPT1BH3BT56 60 aa5.36□□□□□ -1.55
PABPN1-203ENST00000553960 S4R3F8 94 aa5.35□□□□□ -1.55
PABPN1-203ENST00000553960 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.55
PABPN1-203ENST00000553960 LORP23490 312 aaPredicted RBP5.34□□□□□ -1.55
PABPN1-203ENST00000553960 LCA10Q71F78 164 aa5.33□□□□□ -1.56
PABPN1-203ENST00000553960 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
PABPN1-203ENST00000553960 H0YAA0 97 aa5.32□□□□□ -1.56
PABPN1-203ENST00000553960 CSAG1Q6PB30 78 aa5.3□□□□□ -1.56
PABPN1-203ENST00000553960 UBR4Q5T4S7 5183 aa5.27□□□□□ -1.57
PABPN1-203ENST00000553960 MUC2Q02817 5179 aa5.27□□□□□ -1.57
PABPN1-203ENST00000553960 RNF213Q63HN8 5207 aa5.23□□□□□ -1.57
PABPN1-203ENST00000553960 PRR15LQ9BU68 103 aa5.21□□□□□ -1.58
PABPN1-203ENST00000553960 MT1HP80294 61 aa5.2□□□□□ -1.58
PABPN1-203ENST00000553960 SEC61GP60059 68 aa5.18□□□□□ -1.58
PABPN1-203ENST00000553960 A0A1B0GU69 56 aa5.17□□□□□ -1.58
PABPN1-203ENST00000553960 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
PABPN1-203ENST00000553960 Q5VV11 94 aa5.15□□□□□ -1.59
PABPN1-203ENST00000553960 FAT4Q6V0I7 4981 aa5.13□□□□□ -1.59
PABPN1-203ENST00000553960 CRIPTQ9P021 101 aa5.1□□□□□ -1.59
PABPN1-203ENST00000553960 M0QZ58 72 aa5.08□□□□□ -1.6
PABPN1-203ENST00000553960 PSPHP1O15172 72 aa5.08□□□□□ -1.6
PABPN1-203ENST00000553960 H3BS24 57 aa5.07□□□□□ -1.6
PABPN1-203ENST00000553960 UQCR11O14957 56 aa5.07□□□□□ -1.6
PABPN1-203ENST00000553960 A0A1B0GU33 70 aa5.06□□□□□ -1.6
PABPN1-203ENST00000553960 ADM2Q7Z4H4 148 aa5.06□□□□□ -1.6
PABPN1-203ENST00000553960 P0C880 135 aa5.05□□□□□ -1.6
PABPN1-203ENST00000553960 KRTAP9-8Q9BYQ0 159 aa5.05□□□□□ -1.6
PABPN1-203ENST00000553960 SPATA8Q6RVD6 105 aa5.04□□□□□ -1.6
PABPN1-203ENST00000553960 M0R2T5 61 aa5.01□□□□□ -1.61
PABPN1-203ENST00000553960 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
PABPN1-203ENST00000553960 MT2AP02795 61 aa4.98□□□□□ -1.61
PABPN1-203ENST00000553960 A6NED7 52 aa4.97□□□□□ -1.61
PABPN1-203ENST00000553960 SPRR2GQ9BYE4 73 aa4.97□□□□□ -1.61
PABPN1-203ENST00000553960 A6NN06 94 aa4.96□□□□□ -1.62
PABPN1-203ENST00000553960 MIR22HGQ0VDD5 57 aa4.95□□□□□ -1.62
PABPN1-203ENST00000553960 KRTAP13-4Q3LI77 160 aa4.93□□□□□ -1.62
PABPN1-203ENST00000553960 R4GN34 69 aa4.93□□□□□ -1.62
PABPN1-203ENST00000553960 MT1FP04733 61 aa4.92□□□□□ -1.62
PABPN1-203ENST00000553960 KRTAP19-1Q8IUB9 90 aa4.89□□□□□ -1.63
PABPN1-203ENST00000553960 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
PABPN1-203ENST00000553960 KRTAP10-10P60014 251 aa4.87□□□□□ -1.63
PABPN1-203ENST00000553960 KRTAP19-8Q3LI54 63 aa4.85□□□□□ -1.63
PABPN1-203ENST00000553960 PRO0628Q9UI54 55 aa4.85□□□□□ -1.63
PABPN1-203ENST00000553960 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
PABPN1-203ENST00000553960 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
PABPN1-203ENST00000553960 A8MU10 97 aa4.78□□□□□ -1.64
PABPN1-203ENST00000553960 K7ERS5 55 aa4.77□□□□□ -1.65
PABPN1-203ENST00000553960 KRTAP12-2P59991 146 aa4.72□□□□□ -1.65
PABPN1-203ENST00000553960 A0A0D9SG42 100 aa4.71□□□□□ -1.66
PABPN1-203ENST00000553960 MT1BP07438 61 aa4.7□□□□□ -1.66
PABPN1-203ENST00000553960 LINC01554Q52M75 96 aa4.68□□□□□ -1.66
PABPN1-203ENST00000553960 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
PABPN1-203ENST00000553960 PMAIP1Q13794 54 aa4.63□□□□□ -1.67
PABPN1-203ENST00000553960 SPINT4Q6UDR6 99 aa4.63□□□□□ -1.67
PABPN1-203ENST00000553960 ROMO1P60602 79 aa4.56□□□□□ -1.68
PABPN1-203ENST00000553960 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
PABPN1-203ENST00000553960 MT1XP80297 61 aa4.53□□□□□ -1.68
PABPN1-203ENST00000553960 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
PABPN1-203ENST00000553960 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
PABPN1-203ENST00000553960 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
PABPN1-203ENST00000553960 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
PABPN1-203ENST00000553960 C10orf95Q9H7T3 257 aa4.52□□□□□ -1.69
PABPN1-203ENST00000553960 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
PABPN1-203ENST00000553960 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
PABPN1-203ENST00000553960 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
PABPN1-203ENST00000553960 USH2AO75445 5202 aa4.45□□□□□ -1.7
PABPN1-203ENST00000553960 TNP1P09430 55 aa4.42□□□□□ -1.7
PABPN1-203ENST00000553960 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
PABPN1-203ENST00000553960 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
PABPN1-203ENST00000553960 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
PABPN1-203ENST00000553960 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
PABPN1-203ENST00000553960 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
PABPN1-203ENST00000553960 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
PABPN1-203ENST00000553960 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
PABPN1-203ENST00000553960 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
PABPN1-203ENST00000553960 KRTAP8-1Q8IUC2 63 aa4.25□□□□□ -1.73
PABPN1-203ENST00000553960 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
PABPN1-203ENST00000553960 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
PABPN1-203ENST00000553960 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
PABPN1-203ENST00000553960 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
PABPN1-203ENST00000553960 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
PABPN1-203ENST00000553960 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
PABPN1-203ENST00000553960 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
PABPN1-203ENST00000553960 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
PABPN1-203ENST00000553960 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
PABPN1-203ENST00000553960 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
PABPN1-203ENST00000553960 KRTAP5-9P26371 169 aa4.03□□□□□ -1.76
PABPN1-203ENST00000553960 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
PABPN1-203ENST00000553960 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
PABPN1-203ENST00000553960 KRTAP15-1Q3LI76 137 aa4□□□□□ -1.77
PABPN1-203ENST00000553960 MT1EP04732 61 aa3.98□□□□□ -1.77
PABPN1-203ENST00000553960 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.95□□□□□ -1.78
PABPN1-203ENST00000553960 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
PABPN1-203ENST00000553960 KMT2DO14686 5537 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms