RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 CYSTM1Q9H1C7 97 aa7.5□□□□□ -1.21
SHMT2-208ENST00000553868 SPANXA2-OT1Q8N9U9 137 aa7.48□□□□□ -1.21
SHMT2-208ENST00000553868 HRES1P13985 223 aa7.47□□□□□ -1.21
SHMT2-208ENST00000553868 TMEM258P61165 79 aa7.47□□□□□ -1.21
SHMT2-208ENST00000553868 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
SHMT2-208ENST00000553868 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
SHMT2-208ENST00000553868 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
SHMT2-208ENST00000553868 C4orf26Q17RF5 130 aa7.39□□□□□ -1.23
SHMT2-208ENST00000553868 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
SHMT2-208ENST00000553868 RBM12B-AS1Q9P1G2 102 aa7.38□□□□□ -1.23
SHMT2-208ENST00000553868 A8MUN3 132 aa7.37□□□□□ -1.23
SHMT2-208ENST00000553868 COX6B2Q6YFQ2 88 aa7.37□□□□□ -1.23
SHMT2-208ENST00000553868 DMAC1Q96GE9 116 aa7.34□□□□□ -1.23
SHMT2-208ENST00000553868 ACYP2P14621 99 aa7.32□□□□□ -1.24
SHMT2-208ENST00000553868 MPLKIPQ8TAP9 179 aa7.32□□□□□ -1.24
SHMT2-208ENST00000553868 NEBP20929 6669 aa7.26□□□□□ -1.25
SHMT2-208ENST00000553868 H1FX-AS1Q4G0G2 97 aa7.24□□□□□ -1.25
SHMT2-208ENST00000553868 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
SHMT2-208ENST00000553868 SERP1Q9Y6X1 66 aa7.24□□□□□ -1.25
SHMT2-208ENST00000553868 CHKB-CPT1BH3BT56 60 aa7.22□□□□□ -1.25
SHMT2-208ENST00000553868 COA5Q86WW8 74 aa7.21□□□□□ -1.26
SHMT2-208ENST00000553868 KRTAP9-8Q9BYQ0 159 aa7.21□□□□□ -1.26
SHMT2-208ENST00000553868 LCE2BO14633 110 aa7.19□□□□□ -1.26
SHMT2-208ENST00000553868 KRTAP6-3Q3LI67 103 aa7.18□□□□□ -1.26
SHMT2-208ENST00000553868 RPS28P62857 69 aaKnown RBP7.16□□□□□ -1.26
SHMT2-208ENST00000553868 SPTSSBQ8NFR3 76 aa7.16□□□□□ -1.26
SHMT2-208ENST00000553868 S4R3F8 94 aa7.15□□□□□ -1.26
SHMT2-208ENST00000553868 MUC12Q9UKN1 5478 aa7.07□□□□□ -1.28
SHMT2-208ENST00000553868 LCA10Q71F78 164 aa7.07□□□□□ -1.28
SHMT2-208ENST00000553868 KRTAP20-1Q3LI63 56 aa7.06□□□□□ -1.28
SHMT2-208ENST00000553868 SMIM26A0A096LP01 95 aa7.04□□□□□ -1.28
SHMT2-208ENST00000553868 MT2AP02795 61 aa7.03□□□□□ -1.28
SHMT2-208ENST00000553868 CSAG1Q6PB30 78 aa7.03□□□□□ -1.28
SHMT2-208ENST00000553868 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
SHMT2-208ENST00000553868 KRTAP3-3Q9BYR6 98 aa7□□□□□ -1.29
SHMT2-208ENST00000553868 MT1FP04733 61 aa6.99□□□□□ -1.29
SHMT2-208ENST00000553868 KRTAP19-6Q3LI70 58 aa6.99□□□□□ -1.29
SHMT2-208ENST00000553868 V9GYY9 64 aa6.97□□□□□ -1.29
SHMT2-208ENST00000553868 SEC61GP60059 68 aa6.92□□□□□ -1.3
SHMT2-208ENST00000553868 Q1T7F1 81 aa6.9□□□□□ -1.3
SHMT2-208ENST00000553868 LINC01558Q9Y6Z2 57 aa6.9□□□□□ -1.3
SHMT2-208ENST00000553868 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
SHMT2-208ENST00000553868 PRR15LQ9BU68 103 aa6.88□□□□□ -1.31
SHMT2-208ENST00000553868 A0A1B0GU69 56 aa6.86□□□□□ -1.31
SHMT2-208ENST00000553868 H0YAA0 97 aa6.86□□□□□ -1.31
SHMT2-208ENST00000553868 ADM2Q7Z4H4 148 aa6.79□□□□□ -1.32
SHMT2-208ENST00000553868 PSPHP1O15172 72 aa6.75□□□□□ -1.33
SHMT2-208ENST00000553868 KMT2DO14686 5537 aa6.73□□□□□ -1.33
SHMT2-208ENST00000553868 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
SHMT2-208ENST00000553868 MDN1Q9NU22 5596 aa6.72□□□□□ -1.33
SHMT2-208ENST00000553868 A0A1B0GU33 70 aa6.69□□□□□ -1.34
SHMT2-208ENST00000553868 P0C880 135 aa6.69□□□□□ -1.34
SHMT2-208ENST00000553868 Q5VV11 94 aa6.69□□□□□ -1.34
SHMT2-208ENST00000553868 UQCR11O14957 56 aa6.64□□□□□ -1.35
SHMT2-208ENST00000553868 CRIPTQ9P021 101 aa6.64□□□□□ -1.35
SHMT2-208ENST00000553868 KRTAP2-3P0C7H8 128 aa6.63□□□□□ -1.35
SHMT2-208ENST00000553868 KRTAP2-4Q9BYR9 128 aa6.63□□□□□ -1.35
SHMT2-208ENST00000553868 M0QZ58 72 aa6.61□□□□□ -1.35
SHMT2-208ENST00000553868 A6NED7 52 aa6.6□□□□□ -1.35
SHMT2-208ENST00000553868 R4GN34 69 aa6.59□□□□□ -1.35
SHMT2-208ENST00000553868 MIR22HGQ0VDD5 57 aa6.54□□□□□ -1.36
SHMT2-208ENST00000553868 GPR98Q8WXG9 6306 aa6.51□□□□□ -1.37
SHMT2-208ENST00000553868 KRTAP5-9P26371 169 aa6.51□□□□□ -1.37
SHMT2-208ENST00000553868 SPATA8Q6RVD6 105 aa6.51□□□□□ -1.37
SHMT2-208ENST00000553868 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
SHMT2-208ENST00000553868 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.38
SHMT2-208ENST00000553868 SPRR2GQ9BYE4 73 aa6.45□□□□□ -1.38
SHMT2-208ENST00000553868 LINC01554Q52M75 96 aa6.43□□□□□ -1.38
SHMT2-208ENST00000553868 A0A0D9SG42 100 aa6.41□□□□□ -1.38
SHMT2-208ENST00000553868 BRK1Q8WUW1 75 aa6.41□□□□□ -1.38
SHMT2-208ENST00000553868 A6NN06 94 aa6.39□□□□□ -1.39
SHMT2-208ENST00000553868 A8MU10 97 aa6.39□□□□□ -1.39
SHMT2-208ENST00000553868 KRTAP2-2Q9BYT5 123 aa6.37□□□□□ -1.39
SHMT2-208ENST00000553868 KRTAP2-1Q9BYU5 128 aa6.37□□□□□ -1.39
SHMT2-208ENST00000553868 K7ERS5 55 aa6.35□□□□□ -1.39
SHMT2-208ENST00000553868 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
SHMT2-208ENST00000553868 SPINT4Q6UDR6 99 aa6.3□□□□□ -1.4
SHMT2-208ENST00000553868 SPRR2EP22531 72 aa6.28□□□□□ -1.4
SHMT2-208ENST00000553868 SPRR2BP35325 72 aa6.28□□□□□ -1.4
SHMT2-208ENST00000553868 SPRR2AP35326 72 aa6.28□□□□□ -1.4
SHMT2-208ENST00000553868 KRTAP12-1P59990 96 aa6.28□□□□□ -1.4
SHMT2-208ENST00000553868 PLAC4Q8WY50 150 aa6.27□□□□□ -1.41
SHMT2-208ENST00000553868 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
SHMT2-208ENST00000553868 PRO0628Q9UI54 55 aa6.22□□□□□ -1.41
SHMT2-208ENST00000553868 MT1BP07438 61 aa6.18□□□□□ -1.42
SHMT2-208ENST00000553868 CAMK2N1Q7Z7J9 78 aa6.18□□□□□ -1.42
SHMT2-208ENST00000553868 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
SHMT2-208ENST00000553868 KRTAP10-5P60370 271 aa6.17□□□□□ -1.42
SHMT2-208ENST00000553868 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.43
SHMT2-208ENST00000553868 SPRR2DP22532 72 aa6.07□□□□□ -1.44
SHMT2-208ENST00000553868 PMAIP1Q13794 54 aa6.07□□□□□ -1.44
SHMT2-208ENST00000553868 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
SHMT2-208ENST00000553868 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
SHMT2-208ENST00000553868 ROMO1P60602 79 aa5.99□□□□□ -1.45
SHMT2-208ENST00000553868 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
SHMT2-208ENST00000553868 MT1XP80297 61 aa5.95□□□□□ -1.46
SHMT2-208ENST00000553868 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
SHMT2-208ENST00000553868 TNP1P09430 55 aa5.86□□□□□ -1.47
SHMT2-208ENST00000553868 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
SHMT2-208ENST00000553868 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms