RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 ATP11AUNQ6ZP68 121 aa3.71□□□□□ -1.82
VIPAS39-205ENST00000553691 SEC61BP60468 96 aaKnown RBP3.7□□□□□ -1.82
VIPAS39-205ENST00000553691 TYMSOSQ8TAI1 123 aa3.7□□□□□ -1.82
VIPAS39-205ENST00000553691 IGLV7-46A0A075B6I9 117 aa3.69□□□□□ -1.82
VIPAS39-205ENST00000553691 LOC101927531A0A1B0GV80 90 aa3.69□□□□□ -1.82
VIPAS39-205ENST00000553691 Q75L30 129 aa3.69□□□□□ -1.82
VIPAS39-205ENST00000553691 A0A087WSZ3 146 aa3.68□□□□□ -1.82
VIPAS39-205ENST00000553691 A0A0G2JQZ4 141 aa3.68□□□□□ -1.82
VIPAS39-205ENST00000553691 PSPHP1O15172 72 aa3.68□□□□□ -1.82
VIPAS39-205ENST00000553691 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
VIPAS39-205ENST00000553691 MOBPQ13875 183 aa3.68□□□□□ -1.82
VIPAS39-205ENST00000553691 WFDC13Q8IUB5 93 aa3.68□□□□□ -1.82
VIPAS39-205ENST00000553691 CHKB-CPT1BH3BT56 60 aa3.67□□□□□ -1.82
VIPAS39-205ENST00000553691 Q5VV11 94 aa3.67□□□□□ -1.82
VIPAS39-205ENST00000553691 A8MUN3 132 aa3.66□□□□□ -1.82
VIPAS39-205ENST00000553691 LINC00483Q53H64 154 aa3.66□□□□□ -1.82
VIPAS39-205ENST00000553691 KTN1-AS1Q86SY8 53 aa3.66□□□□□ -1.82
VIPAS39-205ENST00000553691 LINC00304Q8N9R0 145 aa3.66□□□□□ -1.82
VIPAS39-205ENST00000553691 RETNLBQ9BQ08 111 aa3.66□□□□□ -1.82
VIPAS39-205ENST00000553691 LINC00472Q9H8W2 130 aa3.66□□□□□ -1.82
VIPAS39-205ENST00000553691 PRR15LQ9BU68 103 aa3.65□□□□□ -1.83
VIPAS39-205ENST00000553691 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
VIPAS39-205ENST00000553691 LINC01558Q9Y6Z2 57 aa3.65□□□□□ -1.83
VIPAS39-205ENST00000553691 A6NED7 52 aa3.64□□□□□ -1.83
VIPAS39-205ENST00000553691 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
VIPAS39-205ENST00000553691 COA5Q86WW8 74 aa3.64□□□□□ -1.83
VIPAS39-205ENST00000553691 ZNF706Q9Y5V0 76 aaPredicted RBP3.64□□□□□ -1.83
VIPAS39-205ENST00000553691 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
VIPAS39-205ENST00000553691 TPRXLQ17RH7 258 aa3.63□□□□□ -1.83
VIPAS39-205ENST00000553691 MMP24-AS1A0A0U1RRL7 71 aa3.62□□□□□ -1.83
VIPAS39-205ENST00000553691 ASB16-AS1Q495Z4 193 aa3.62□□□□□ -1.83
VIPAS39-205ENST00000553691 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
VIPAS39-205ENST00000553691 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
VIPAS39-205ENST00000553691 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
VIPAS39-205ENST00000553691 IGLV9-49A0A0B4J1Y8 123 aa3.6□□□□□ -1.83
VIPAS39-205ENST00000553691 DEFB116Q30KQ4 102 aa3.6□□□□□ -1.83
VIPAS39-205ENST00000553691 SPAG11AQ6PDA7 123 aa3.6□□□□□ -1.83
VIPAS39-205ENST00000553691 KRTAP13-3Q3SY46 172 aa3.59□□□□□ -1.83
VIPAS39-205ENST00000553691 C7orf65Q6ZTY9 151 aa3.59□□□□□ -1.83
VIPAS39-205ENST00000553691 C8orf17Q9NRJ1 99 aa3.59□□□□□ -1.83
VIPAS39-205ENST00000553691 A0A1B0GVX0 72 aa3.58□□□□□ -1.84
VIPAS39-205ENST00000553691 SPINK1P00995 79 aa3.58□□□□□ -1.84
VIPAS39-205ENST00000553691 RPS29P62273 56 aaKnown RBP3.58□□□□□ -1.84
VIPAS39-205ENST00000553691 SPTSSBQ8NFR3 76 aa3.58□□□□□ -1.84
VIPAS39-205ENST00000553691 MRPL34Q9BQ48 92 aaKnown RBP3.58□□□□□ -1.84
VIPAS39-205ENST00000553691 A6NN06 94 aa3.57□□□□□ -1.84
VIPAS39-205ENST00000553691 ACYP2P14621 99 aa3.57□□□□□ -1.84
VIPAS39-205ENST00000553691 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
VIPAS39-205ENST00000553691 SSBP3-AS1Q7Z2R9 100 aa3.57□□□□□ -1.84
VIPAS39-205ENST00000553691 KRTAP4-1Q9BYQ7 146 aa3.57□□□□□ -1.84
VIPAS39-205ENST00000553691 C8orf87E5RJ46 101 aa3.56□□□□□ -1.84
VIPAS39-205ENST00000553691 LCA10Q71F78 164 aa3.56□□□□□ -1.84
VIPAS39-205ENST00000553691 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
VIPAS39-205ENST00000553691 Q96NJ1 140 aa3.54□□□□□ -1.84
VIPAS39-205ENST00000553691 RBM12B-AS1Q9P1G2 102 aa3.54□□□□□ -1.84
VIPAS39-205ENST00000553691 PCOTHQ58A44 107 aa3.53□□□□□ -1.84
VIPAS39-205ENST00000553691 IGHV6-1A0A0B4J1U7 121 aa3.52□□□□□ -1.85
VIPAS39-205ENST00000553691 HRES1P13985 223 aa3.52□□□□□ -1.85
VIPAS39-205ENST00000553691 KRTAP19-2Q3LHN2 52 aa3.5□□□□□ -1.85
VIPAS39-205ENST00000553691 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
VIPAS39-205ENST00000553691 NOTCH2NLQ7Z3S9 236 aa3.49□□□□□ -1.85
VIPAS39-205ENST00000553691 DMAC1Q96GE9 116 aa3.49□□□□□ -1.85
VIPAS39-205ENST00000553691 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
VIPAS39-205ENST00000553691 M0R2T5 61 aa3.48□□□□□ -1.85
VIPAS39-205ENST00000553691 A0A1B0GU69 56 aa3.47□□□□□ -1.85
VIPAS39-205ENST00000553691 UQCR11O14957 56 aa3.47□□□□□ -1.85
VIPAS39-205ENST00000553691 SPINK7P58062 85 aa3.47□□□□□ -1.85
VIPAS39-205ENST00000553691 A8MU10 97 aa3.46□□□□□ -1.86
VIPAS39-205ENST00000553691 SPATA8Q6RVD6 105 aa3.46□□□□□ -1.86
VIPAS39-205ENST00000553691 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
VIPAS39-205ENST00000553691 MT1HP80294 61 aa3.45□□□□□ -1.86
VIPAS39-205ENST00000553691 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
VIPAS39-205ENST00000553691 C9orf92A6NGG3 77 aa3.44□□□□□ -1.86
VIPAS39-205ENST00000553691 LINC00313P59037 77 aa3.44□□□□□ -1.86
VIPAS39-205ENST00000553691 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
VIPAS39-205ENST00000553691 USH2AO75445 5202 aa3.42□□□□□ -1.86
VIPAS39-205ENST00000553691 MIR22HGQ0VDD5 57 aa3.42□□□□□ -1.86
VIPAS39-205ENST00000553691 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
VIPAS39-205ENST00000553691 Q5W150 140 aa3.41□□□□□ -1.86
VIPAS39-205ENST00000553691 RPL37P61927 97 aaKnown RBP3.4□□□□□ -1.87
VIPAS39-205ENST00000553691 LINC01554Q52M75 96 aa3.4□□□□□ -1.87
VIPAS39-205ENST00000553691 PRAC1Q96KF2 57 aa3.4□□□□□ -1.87
VIPAS39-205ENST00000553691 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
VIPAS39-205ENST00000553691 KRTAP16-1A8MUX0 517 aa3.38□□□□□ -1.87
VIPAS39-205ENST00000553691 COX6B2Q6YFQ2 88 aa3.38□□□□□ -1.87
VIPAS39-205ENST00000553691 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
VIPAS39-205ENST00000553691 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
VIPAS39-205ENST00000553691 C20orf166-AS1Q96NR2 134 aa3.32□□□□□ -1.88
VIPAS39-205ENST00000553691 NEBP20929 6669 aa3.31□□□□□ -1.88
VIPAS39-205ENST00000553691 A8MUU9 505 aa3.31□□□□□ -1.88
VIPAS39-205ENST00000553691 K7ERS5 55 aa3.31□□□□□ -1.88
VIPAS39-205ENST00000553691 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
VIPAS39-205ENST00000553691 CSAG1Q6PB30 78 aa3.26□□□□□ -1.89
VIPAS39-205ENST00000553691 A0A1B0GU33 70 aa3.24□□□□□ -1.89
VIPAS39-205ENST00000553691 ADM2Q7Z4H4 148 aa3.24□□□□□ -1.89
VIPAS39-205ENST00000553691 KRTAP25-1Q3LHN0 102 aa3.23□□□□□ -1.89
VIPAS39-205ENST00000553691 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.89
VIPAS39-205ENST00000553691 H1FX-AS1Q4G0G2 97 aa3.21□□□□□ -1.9
VIPAS39-205ENST00000553691 H0YAA0 97 aa3.18□□□□□ -1.9
VIPAS39-205ENST00000553691 MT2AP02795 61 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms