RNA–Protein interactions for RNA: ENST00000553674.1

UBR7-202, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 2

Gene UBR7, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-202ENST00000553674 NDUFC1O43677 76 aa8.87□□□□□ -0.99
UBR7-202ENST00000553674 LCA10Q71F78 164 aa8.87□□□□□ -0.99
UBR7-202ENST00000553674 S4R3F8 94 aa8.87□□□□□ -0.99
UBR7-202ENST00000553674 KRTAP10-6P60371 365 aaPredicted RBP8.86□□□□□ -0.99
UBR7-202ENST00000553674 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
UBR7-202ENST00000553674 ACYP2P14621 99 aa8.78□□□□□ -1
UBR7-202ENST00000553674 KRTAP9-8Q9BYQ0 159 aa8.76□□□□□ -1.01
UBR7-202ENST00000553674 CSAG1Q6PB30 78 aa8.73□□□□□ -1.01
UBR7-202ENST00000553674 MT2AP02795 61 aa8.68□□□□□ -1.02
UBR7-202ENST00000553674 PCP4P48539 62 aa8.66□□□□□ -1.02
UBR7-202ENST00000553674 MT1FP04733 61 aa8.62□□□□□ -1.03
UBR7-202ENST00000553674 COA5Q86WW8 74 aa8.62□□□□□ -1.03
UBR7-202ENST00000553674 TMEM258P61165 79 aa8.59□□□□□ -1.03
UBR7-202ENST00000553674 CHKB-CPT1BH3BT56 60 aa8.58□□□□□ -1.04
UBR7-202ENST00000553674 ATP5EP56381 51 aaPredicted RBP8.56□□□□□ -1.04
UBR7-202ENST00000553674 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
UBR7-202ENST00000553674 H0YAA0 97 aa8.51□□□□□ -1.05
UBR7-202ENST00000553674 SPTSSBQ8NFR3 76 aa8.5□□□□□ -1.05
UBR7-202ENST00000553674 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.06
UBR7-202ENST00000553674 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
UBR7-202ENST00000553674 P0C880 135 aa8.38□□□□□ -1.07
UBR7-202ENST00000553674 SERP1Q9Y6X1 66 aa8.34□□□□□ -1.07
UBR7-202ENST00000553674 KRTAP19-1Q8IUB9 90 aa8.32□□□□□ -1.08
UBR7-202ENST00000553674 LCE2BO14633 110 aa8.31□□□□□ -1.08
UBR7-202ENST00000553674 KRTAP9-2Q9BYQ4 174 aa8.31□□□□□ -1.08
UBR7-202ENST00000553674 SPRR2GQ9BYE4 73 aa8.27□□□□□ -1.09
UBR7-202ENST00000553674 CRIPTQ9P021 101 aa8.27□□□□□ -1.09
UBR7-202ENST00000553674 USH2AO75445 5202 aa8.24□□□□□ -1.09
UBR7-202ENST00000553674 LINC01558Q9Y6Z2 57 aa8.16□□□□□ -1.1
UBR7-202ENST00000553674 SEC61GP60059 68 aa8.15□□□□□ -1.1
UBR7-202ENST00000553674 RPS28P62857 69 aaKnown RBP8.15□□□□□ -1.1
UBR7-202ENST00000553674 KRTAP19-8Q3LI54 63 aa8.14□□□□□ -1.11
UBR7-202ENST00000553674 R4GN34 69 aa8.13□□□□□ -1.11
UBR7-202ENST00000553674 A0A1B0GU69 56 aa8.12□□□□□ -1.11
UBR7-202ENST00000553674 M0QZ58 72 aa8.12□□□□□ -1.11
UBR7-202ENST00000553674 KRTAP13-4Q3LI77 160 aa8.09□□□□□ -1.11
UBR7-202ENST00000553674 MT1BP07438 61 aa8.08□□□□□ -1.12
UBR7-202ENST00000553674 FSIP2Q5CZC0 6907 aa8.08□□□□□ -1.12
UBR7-202ENST00000553674 SMIM26A0A096LP01 95 aa8.06□□□□□ -1.12
UBR7-202ENST00000553674 SSPOA2VEC9 5147 aa8.05□□□□□ -1.12
UBR7-202ENST00000553674 A0A1B0GU33 70 aa8.04□□□□□ -1.12
UBR7-202ENST00000553674 Q1T7F1 81 aa8.02□□□□□ -1.13
UBR7-202ENST00000553674 Q5VV11 94 aa8.02□□□□□ -1.13
UBR7-202ENST00000553674 PRR15LQ9BU68 103 aa8□□□□□ -1.13
UBR7-202ENST00000553674 LINC01554Q52M75 96 aa7.97□□□□□ -1.13
UBR7-202ENST00000553674 SPATA8Q6RVD6 105 aa7.96□□□□□ -1.14
UBR7-202ENST00000553674 V9GYY9 64 aa7.96□□□□□ -1.14
UBR7-202ENST00000553674 CRCT1Q9UGL9 99 aa7.94□□□□□ -1.14
UBR7-202ENST00000553674 PSPHP1O15172 72 aa7.9□□□□□ -1.14
UBR7-202ENST00000553674 KRTAP19-6Q3LI70 58 aa7.87□□□□□ -1.15
UBR7-202ENST00000553674 A6NN06 94 aa7.84□□□□□ -1.15
UBR7-202ENST00000553674 A0A0D9SG42 100 aa7.83□□□□□ -1.16
UBR7-202ENST00000553674 KRTAP9-6A0A140TA67 174 aa7.82□□□□□ -1.16
UBR7-202ENST00000553674 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
UBR7-202ENST00000553674 A8MU10 97 aa7.8□□□□□ -1.16
UBR7-202ENST00000553674 UQCR11O14957 56 aa7.79□□□□□ -1.16
UBR7-202ENST00000553674 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
UBR7-202ENST00000553674 KRTAP10-5P60370 271 aa7.74□□□□□ -1.17
UBR7-202ENST00000553674 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
UBR7-202ENST00000553674 MT1XP80297 61 aa7.71□□□□□ -1.18
UBR7-202ENST00000553674 KRTAP12-2P59991 146 aa7.69□□□□□ -1.18
UBR7-202ENST00000553674 MIR22HGQ0VDD5 57 aa7.69□□□□□ -1.18
UBR7-202ENST00000553674 SPINT4Q6UDR6 99 aa7.66□□□□□ -1.18
UBR7-202ENST00000553674 A6NED7 52 aa7.62□□□□□ -1.19
UBR7-202ENST00000553674 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
UBR7-202ENST00000553674 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
UBR7-202ENST00000553674 CDC42SE1Q9NRR8 79 aa7.44□□□□□ -1.22
UBR7-202ENST00000553674 MACF1Q9UPN3 7388 aaKnown RBP7.4□□□□□ -1.23
UBR7-202ENST00000553674 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.38□□□□□ -1.23
UBR7-202ENST00000553674 KRTAP10-7P60409 375 aaPredicted RBP7.37□□□□□ -1.23
UBR7-202ENST00000553674 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
UBR7-202ENST00000553674 K7ERS5 55 aa7.34□□□□□ -1.23
UBR7-202ENST00000553674 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
UBR7-202ENST00000553674 SYNE2Q8WXH0 6885 aaKnown RBP7.24□□□□□ -1.25
UBR7-202ENST00000553674 KRTAP4-8A0A0G2JLE6 195 aa7.21□□□□□ -1.26
UBR7-202ENST00000553674 BRK1Q8WUW1 75 aa7.21□□□□□ -1.26
UBR7-202ENST00000553674 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.26
UBR7-202ENST00000553674 KMT2DO14686 5537 aa7.21□□□□□ -1.26
UBR7-202ENST00000553674 TNP1P09430 55 aa7.13□□□□□ -1.27
UBR7-202ENST00000553674 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
UBR7-202ENST00000553674 KRTAP6-3Q3LI67 103 aa7.09□□□□□ -1.27
UBR7-202ENST00000553674 KRTAP8-1Q8IUC2 63 aa7.06□□□□□ -1.28
UBR7-202ENST00000553674 ROMO1P60602 79 aa7.05□□□□□ -1.28
UBR7-202ENST00000553674 KRTAP25-1Q3LHN0 102 aa7.03□□□□□ -1.28
UBR7-202ENST00000553674 KRTAP5-9P26371 169 aa7.02□□□□□ -1.29
UBR7-202ENST00000553674 H3BS24 57 aa6.98□□□□□ -1.29
UBR7-202ENST00000553674 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
UBR7-202ENST00000553674 SPRR2FQ96RM1 72 aa6.91□□□□□ -1.3
UBR7-202ENST00000553674 KRTAP19-7Q3SYF9 63 aa6.89□□□□□ -1.31
UBR7-202ENST00000553674 SVIPQ8NHG7 77 aa6.86□□□□□ -1.31
UBR7-202ENST00000553674 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
UBR7-202ENST00000553674 PRO0628Q9UI54 55 aa6.84□□□□□ -1.31
UBR7-202ENST00000553674 MUC12Q9UKN1 5478 aa6.84□□□□□ -1.31
UBR7-202ENST00000553674 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
UBR7-202ENST00000553674 PMAIP1Q13794 54 aa6.81□□□□□ -1.32
UBR7-202ENST00000553674 MT1EP04732 61 aa6.78□□□□□ -1.32
UBR7-202ENST00000553674 MDN1Q9NU22 5596 aa6.77□□□□□ -1.33
UBR7-202ENST00000553674 NEBP20929 6669 aa6.77□□□□□ -1.33
UBR7-202ENST00000553674 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
UBR7-202ENST00000553674 LCE1AQ5T7P2 110 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms