RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 MT1HP80294 61 aa4.79□□□□□ -1.64
CHD8-204ENST00000553622 CHKB-CPT1BH3BT56 60 aa4.78□□□□□ -1.64
CHD8-204ENST00000553622 LCA10Q71F78 164 aa4.78□□□□□ -1.64
CHD8-204ENST00000553622 TMEM258P61165 79 aa4.77□□□□□ -1.65
CHD8-204ENST00000553622 ATP5EP56381 51 aaPredicted RBP4.76□□□□□ -1.65
CHD8-204ENST00000553622 FAT4Q6V0I7 4981 aa4.74□□□□□ -1.65
CHD8-204ENST00000553622 COA5Q86WW8 74 aa4.74□□□□□ -1.65
CHD8-204ENST00000553622 FLGP20930 4061 aaPredicted RBP4.73□□□□□ -1.65
CHD8-204ENST00000553622 CSAG1Q6PB30 78 aa4.72□□□□□ -1.65
CHD8-204ENST00000553622 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
CHD8-204ENST00000553622 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
CHD8-204ENST00000553622 KRTAP10-6P60371 365 aaPredicted RBP4.65□□□□□ -1.67
CHD8-204ENST00000553622 SERP1Q9Y6X1 66 aa4.63□□□□□ -1.67
CHD8-204ENST00000553622 LORP23490 312 aaPredicted RBP4.61□□□□□ -1.67
CHD8-204ENST00000553622 ADM2Q7Z4H4 148 aa4.59□□□□□ -1.67
CHD8-204ENST00000553622 MT2AP02795 61 aa4.57□□□□□ -1.68
CHD8-204ENST00000553622 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
CHD8-204ENST00000553622 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
CHD8-204ENST00000553622 H0YAA0 97 aa4.54□□□□□ -1.68
CHD8-204ENST00000553622 MT1FP04733 61 aa4.54□□□□□ -1.68
CHD8-204ENST00000553622 SEC61GP60059 68 aa4.54□□□□□ -1.68
CHD8-204ENST00000553622 P0C880 135 aa4.51□□□□□ -1.69
CHD8-204ENST00000553622 A0A1B0GU69 56 aa4.5□□□□□ -1.69
CHD8-204ENST00000553622 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
CHD8-204ENST00000553622 RPS28P62857 69 aaKnown RBP4.49□□□□□ -1.69
CHD8-204ENST00000553622 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
CHD8-204ENST00000553622 SMIM26A0A096LP01 95 aa4.48□□□□□ -1.69
CHD8-204ENST00000553622 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
CHD8-204ENST00000553622 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
CHD8-204ENST00000553622 V9GYY9 64 aa4.44□□□□□ -1.7
CHD8-204ENST00000553622 M0QZ58 72 aa4.43□□□□□ -1.7
CHD8-204ENST00000553622 LCE2BO14633 110 aa4.43□□□□□ -1.7
CHD8-204ENST00000553622 CRIPTQ9P021 101 aa4.43□□□□□ -1.7
CHD8-204ENST00000553622 R4GN34 69 aa4.43□□□□□ -1.7
CHD8-204ENST00000553622 A0A1B0GU33 70 aa4.41□□□□□ -1.7
CHD8-204ENST00000553622 PSPHP1O15172 72 aa4.41□□□□□ -1.7
CHD8-204ENST00000553622 Q1T7F1 81 aa4.41□□□□□ -1.7
CHD8-204ENST00000553622 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
CHD8-204ENST00000553622 LINC01554Q52M75 96 aa4.38□□□□□ -1.71
CHD8-204ENST00000553622 KRTAP19-1Q8IUB9 90 aa4.36□□□□□ -1.71
CHD8-204ENST00000553622 SPRR2GQ9BYE4 73 aa4.36□□□□□ -1.71
CHD8-204ENST00000553622 SPATA8Q6RVD6 105 aa4.35□□□□□ -1.71
CHD8-204ENST00000553622 KRTAP13-4Q3LI77 160 aa4.34□□□□□ -1.71
CHD8-204ENST00000553622 A0A0D9SG42 100 aa4.32□□□□□ -1.72
CHD8-204ENST00000553622 Q5VV11 94 aa4.32□□□□□ -1.72
CHD8-204ENST00000553622 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
CHD8-204ENST00000553622 UQCR11O14957 56 aa4.3□□□□□ -1.72
CHD8-204ENST00000553622 A6NED7 52 aa4.28□□□□□ -1.72
CHD8-204ENST00000553622 KRTAP19-8Q3LI54 63 aa4.27□□□□□ -1.73
CHD8-204ENST00000553622 A8MU10 97 aa4.26□□□□□ -1.73
CHD8-204ENST00000553622 MIR22HGQ0VDD5 57 aa4.26□□□□□ -1.73
CHD8-204ENST00000553622 PLAC4Q8WY50 150 aa4.26□□□□□ -1.73
CHD8-204ENST00000553622 MT1BP07438 61 aa4.24□□□□□ -1.73
CHD8-204ENST00000553622 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
CHD8-204ENST00000553622 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
CHD8-204ENST00000553622 A6NN06 94 aa4.19□□□□□ -1.74
CHD8-204ENST00000553622 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
CHD8-204ENST00000553622 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
CHD8-204ENST00000553622 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
CHD8-204ENST00000553622 USH2AO75445 5202 aa4.15□□□□□ -1.74
CHD8-204ENST00000553622 K7ERS5 55 aa4.13□□□□□ -1.75
CHD8-204ENST00000553622 CDC42SE1Q9NRR8 79 aa4.13□□□□□ -1.75
CHD8-204ENST00000553622 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
CHD8-204ENST00000553622 FSIP2Q5CZC0 6907 aa4.11□□□□□ -1.75
CHD8-204ENST00000553622 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
CHD8-204ENST00000553622 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
CHD8-204ENST00000553622 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.75
CHD8-204ENST00000553622 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
CHD8-204ENST00000553622 MT1XP80297 61 aa4.07□□□□□ -1.76
CHD8-204ENST00000553622 SSPOA2VEC9 5147 aa4.06□□□□□ -1.76
CHD8-204ENST00000553622 KRTAP9-6A0A140TA67 174 aa4.05□□□□□ -1.76
CHD8-204ENST00000553622 KRTAP4-8Q9BYQ9 185 aa3.98□□□□□ -1.77
CHD8-204ENST00000553622 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
CHD8-204ENST00000553622 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
CHD8-204ENST00000553622 FCGBPQ9Y6R7 5405 aaPredicted RBP3.92□□□□□ -1.78
CHD8-204ENST00000553622 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
CHD8-204ENST00000553622 TNP1P09430 55 aa3.9□□□□□ -1.79
CHD8-204ENST00000553622 ROMO1P60602 79 aa3.89□□□□□ -1.79
CHD8-204ENST00000553622 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
CHD8-204ENST00000553622 PRO0628Q9UI54 55 aa3.86□□□□□ -1.79
CHD8-204ENST00000553622 H3BS24 57 aa3.85□□□□□ -1.79
CHD8-204ENST00000553622 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
CHD8-204ENST00000553622 KRTAP25-1Q3LHN0 102 aa3.83□□□□□ -1.8
CHD8-204ENST00000553622 KRTAP4-8A0A0G2JLE6 195 aa3.8□□□□□ -1.8
CHD8-204ENST00000553622 KRTAP8-1Q8IUC2 63 aa3.78□□□□□ -1.8
CHD8-204ENST00000553622 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
CHD8-204ENST00000553622 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
CHD8-204ENST00000553622 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
CHD8-204ENST00000553622 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
CHD8-204ENST00000553622 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
CHD8-204ENST00000553622 KMT2DO14686 5537 aa3.7□□□□□ -1.82
CHD8-204ENST00000553622 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
CHD8-204ENST00000553622 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
CHD8-204ENST00000553622 SPRR2FQ96RM1 72 aa3.68□□□□□ -1.82
CHD8-204ENST00000553622 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
CHD8-204ENST00000553622 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
CHD8-204ENST00000553622 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
CHD8-204ENST00000553622 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
CHD8-204ENST00000553622 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
CHD8-204ENST00000553622 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms