RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 HRES1P13985 223 aa3.98□□□□□ -1.77
ATXN3-221ENST00000553498 COA5Q86WW8 74 aa3.98□□□□□ -1.77
ATXN3-221ENST00000553498 DMAC1Q96GE9 116 aa3.98□□□□□ -1.77
ATXN3-221ENST00000553498 FAT3Q8TDW7 4589 aa3.98□□□□□ -1.77
ATXN3-221ENST00000553498 A8MUN3 132 aa3.97□□□□□ -1.77
ATXN3-221ENST00000553498 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.78
ATXN3-221ENST00000553498 TNXBP22105 4242 aa3.96□□□□□ -1.78
ATXN3-221ENST00000553498 KIAA1109Q2LD37 5005 aa3.96□□□□□ -1.78
ATXN3-221ENST00000553498 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
ATXN3-221ENST00000553498 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
ATXN3-221ENST00000553498 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
ATXN3-221ENST00000553498 RETNLBQ9BQ08 111 aa3.95□□□□□ -1.78
ATXN3-221ENST00000553498 EPPK1P58107 5090 aaKnown RBP3.95□□□□□ -1.78
ATXN3-221ENST00000553498 ATP11AUNQ6ZP68 121 aa3.93□□□□□ -1.78
ATXN3-221ENST00000553498 CHKB-CPT1BH3BT56 60 aa3.92□□□□□ -1.78
ATXN3-221ENST00000553498 RPL37P61927 97 aaKnown RBP3.92□□□□□ -1.78
ATXN3-221ENST00000553498 LRP1Q07954 4544 aaKnown RBP3.91□□□□□ -1.78
ATXN3-221ENST00000553498 C4orf26Q17RF5 130 aa3.91□□□□□ -1.78
ATXN3-221ENST00000553498 TPRXLQ17RH7 258 aa3.91□□□□□ -1.78
ATXN3-221ENST00000553498 SPINK7P58062 85 aa3.9□□□□□ -1.79
ATXN3-221ENST00000553498 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
ATXN3-221ENST00000553498 SPTSSBQ8NFR3 76 aa3.89□□□□□ -1.79
ATXN3-221ENST00000553498 LINC01558Q9Y6Z2 57 aa3.89□□□□□ -1.79
ATXN3-221ENST00000553498 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
ATXN3-221ENST00000553498 MYCBP2O75592 4640 aa3.85□□□□□ -1.79
ATXN3-221ENST00000553498 HERC2O95714 4834 aa3.85□□□□□ -1.79
ATXN3-221ENST00000553498 PRR15LQ9BU68 103 aa3.85□□□□□ -1.79
ATXN3-221ENST00000553498 FLG2Q5D862 2391 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-221ENST00000553498 COX6B2Q6YFQ2 88 aa3.84□□□□□ -1.79
ATXN3-221ENST00000553498 PSPHP1O15172 72 aa3.82□□□□□ -1.8
ATXN3-221ENST00000553498 Q5VV11 94 aa3.82□□□□□ -1.8
ATXN3-221ENST00000553498 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-221ENST00000553498 PRO0628Q9UI54 55 aa3.81□□□□□ -1.8
ATXN3-221ENST00000553498 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-221ENST00000553498 A0A1B0GU69 56 aa3.79□□□□□ -1.8
ATXN3-221ENST00000553498 SEC61GP60059 68 aa3.78□□□□□ -1.8
ATXN3-221ENST00000553498 BRK1Q8WUW1 75 aa3.78□□□□□ -1.8
ATXN3-221ENST00000553498 ABCA13Q86UQ4 5058 aa3.78□□□□□ -1.8
ATXN3-221ENST00000553498 A6NED7 52 aa3.75□□□□□ -1.81
ATXN3-221ENST00000553498 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
ATXN3-221ENST00000553498 RBM12B-AS1Q9P1G2 102 aa3.74□□□□□ -1.81
ATXN3-221ENST00000553498 CDC42SE1Q9NRR8 79 aa3.73□□□□□ -1.81
ATXN3-221ENST00000553498 UQCR11O14957 56 aa3.72□□□□□ -1.81
ATXN3-221ENST00000553498 KRTAP10-6P60371 365 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-221ENST00000553498 H1FX-AS1Q4G0G2 97 aa3.72□□□□□ -1.81
ATXN3-221ENST00000553498 DMBT1Q9UGM3 2413 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-221ENST00000553498 S4R3F8 94 aa3.7□□□□□ -1.82
ATXN3-221ENST00000553498 SPATA8Q6RVD6 105 aa3.68□□□□□ -1.82
ATXN3-221ENST00000553498 LCA10Q71F78 164 aa3.67□□□□□ -1.82
ATXN3-221ENST00000553498 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
ATXN3-221ENST00000553498 LRP2P98164 4655 aa3.65□□□□□ -1.82
ATXN3-221ENST00000553498 MUC17Q685J3 4493 aa3.64□□□□□ -1.83
ATXN3-221ENST00000553498 CSAG1Q6PB30 78 aa3.64□□□□□ -1.83
ATXN3-221ENST00000553498 A0A1B0GU33 70 aa3.63□□□□□ -1.83
ATXN3-221ENST00000553498 MT3P25713 68 aa3.63□□□□□ -1.83
ATXN3-221ENST00000553498 PCLOQ9Y6V0 5065 aa3.62□□□□□ -1.83
ATXN3-221ENST00000553498 LPAP08519 4548 aa3.62□□□□□ -1.83
ATXN3-221ENST00000553498 HMCN2Q8NDA2 5059 aa3.62□□□□□ -1.83
ATXN3-221ENST00000553498 H0YAA0 97 aa3.61□□□□□ -1.83
ATXN3-221ENST00000553498 PMAIP1Q13794 54 aa3.6□□□□□ -1.83
ATXN3-221ENST00000553498 A8MU10 97 aa3.57□□□□□ -1.84
ATXN3-221ENST00000553498 A6NN06 94 aa3.55□□□□□ -1.84
ATXN3-221ENST00000553498 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
ATXN3-221ENST00000553498 HERC1Q15751 4861 aa3.55□□□□□ -1.84
ATXN3-221ENST00000553498 K7ERS5 55 aa3.54□□□□□ -1.84
ATXN3-221ENST00000553498 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
ATXN3-221ENST00000553498 KRTAP4-1Q9BYQ7 146 aa3.54□□□□□ -1.84
ATXN3-221ENST00000553498 M0QZ58 72 aa3.53□□□□□ -1.84
ATXN3-221ENST00000553498 ADM2Q7Z4H4 148 aa3.52□□□□□ -1.85
ATXN3-221ENST00000553498 KRTAP19-2Q3LHN2 52 aa3.51□□□□□ -1.85
ATXN3-221ENST00000553498 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
ATXN3-221ENST00000553498 P0C880 135 aa3.48□□□□□ -1.85
ATXN3-221ENST00000553498 CRIPTQ9P021 101 aa3.44□□□□□ -1.86
ATXN3-221ENST00000553498 KRTAP13-4Q3LI77 160 aa3.43□□□□□ -1.86
ATXN3-221ENST00000553498 R4GN34 69 aa3.43□□□□□ -1.86
ATXN3-221ENST00000553498 A0A0D9SG42 100 aa3.39□□□□□ -1.87
ATXN3-221ENST00000553498 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
ATXN3-221ENST00000553498 MUC2Q02817 5179 aa3.38□□□□□ -1.87
ATXN3-221ENST00000553498 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-221ENST00000553498 KRTAP12-1P59990 96 aa3.36□□□□□ -1.87
ATXN3-221ENST00000553498 ROMO1P60602 79 aa3.36□□□□□ -1.87
ATXN3-221ENST00000553498 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
ATXN3-221ENST00000553498 UBR4Q5T4S7 5183 aa3.34□□□□□ -1.87
ATXN3-221ENST00000553498 RNF213Q63HN8 5207 aa3.34□□□□□ -1.87
ATXN3-221ENST00000553498 KRTAP12-2P59991 146 aa3.33□□□□□ -1.88
ATXN3-221ENST00000553498 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
ATXN3-221ENST00000553498 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
ATXN3-221ENST00000553498 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
ATXN3-221ENST00000553498 MT1HP80294 61 aa3.32□□□□□ -1.88
ATXN3-221ENST00000553498 M0R2T5 61 aa3.31□□□□□ -1.88
ATXN3-221ENST00000553498 LINC01554Q52M75 96 aa3.3□□□□□ -1.88
ATXN3-221ENST00000553498 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
ATXN3-221ENST00000553498 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
ATXN3-221ENST00000553498 SPRR2GQ9BYE4 73 aa3.27□□□□□ -1.89
ATXN3-221ENST00000553498 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
ATXN3-221ENST00000553498 CAMK2N1Q7Z7J9 78 aa3.22□□□□□ -1.89
ATXN3-221ENST00000553498 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
ATXN3-221ENST00000553498 MT2AP02795 61 aa3.21□□□□□ -1.9
ATXN3-221ENST00000553498 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
ATXN3-221ENST00000553498 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms