RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 SNURFQ9Y675 71 aa7.05□□□□□ -1.28
MTHFD1-204ENST00000553405 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
MTHFD1-204ENST00000553405 DMAC1Q96GE9 116 aa7.03□□□□□ -1.28
MTHFD1-204ENST00000553405 COX7CP15954 63 aa7.01□□□□□ -1.29
MTHFD1-204ENST00000553405 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
MTHFD1-204ENST00000553405 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
MTHFD1-204ENST00000553405 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
MTHFD1-204ENST00000553405 USH2AO75445 5202 aa6.94□□□□□ -1.3
MTHFD1-204ENST00000553405 CYSTM1Q9H1C7 97 aa6.94□□□□□ -1.3
MTHFD1-204ENST00000553405 KRTAP10-10P60014 251 aa6.93□□□□□ -1.3
MTHFD1-204ENST00000553405 SPANXA2-OT1Q8N9U9 137 aa6.92□□□□□ -1.3
MTHFD1-204ENST00000553405 ANAPC13Q9BS18 74 aa6.91□□□□□ -1.3
MTHFD1-204ENST00000553405 NDUFC1O43677 76 aa6.88□□□□□ -1.31
MTHFD1-204ENST00000553405 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
MTHFD1-204ENST00000553405 H7BZZ5 65 aa6.86□□□□□ -1.31
MTHFD1-204ENST00000553405 ACYP2P14621 99 aa6.84□□□□□ -1.31
MTHFD1-204ENST00000553405 CCDC179H3BU77 68 aa6.83□□□□□ -1.32
MTHFD1-204ENST00000553405 SSPOA2VEC9 5147 aa6.83□□□□□ -1.32
MTHFD1-204ENST00000553405 H0YAA0 97 aa6.81□□□□□ -1.32
MTHFD1-204ENST00000553405 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
MTHFD1-204ENST00000553405 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.34
MTHFD1-204ENST00000553405 ADM2Q7Z4H4 148 aa6.7□□□□□ -1.34
MTHFD1-204ENST00000553405 COA5Q86WW8 74 aa6.69□□□□□ -1.34
MTHFD1-204ENST00000553405 CHKB-CPT1BH3BT56 60 aa6.67□□□□□ -1.34
MTHFD1-204ENST00000553405 CRCT1Q9UGL9 99 aa6.67□□□□□ -1.34
MTHFD1-204ENST00000553405 P0C880 135 aa6.66□□□□□ -1.34
MTHFD1-204ENST00000553405 CRIPTQ9P021 101 aa6.65□□□□□ -1.34
MTHFD1-204ENST00000553405 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
MTHFD1-204ENST00000553405 KRTAP9-6A0A140TA67 174 aa6.63□□□□□ -1.35
MTHFD1-204ENST00000553405 KRTAP19-8Q3LI54 63 aa6.63□□□□□ -1.35
MTHFD1-204ENST00000553405 MT1BP07438 61 aa6.59□□□□□ -1.35
MTHFD1-204ENST00000553405 ATP5EP56381 51 aaPredicted RBP6.57□□□□□ -1.36
MTHFD1-204ENST00000553405 FCGBPQ9Y6R7 5405 aaPredicted RBP6.55□□□□□ -1.36
MTHFD1-204ENST00000553405 TMEM258P61165 79 aa6.55□□□□□ -1.36
MTHFD1-204ENST00000553405 KRTAP19-6Q3LI70 58 aa6.51□□□□□ -1.37
MTHFD1-204ENST00000553405 Q5VV11 94 aa6.49□□□□□ -1.37
MTHFD1-204ENST00000553405 R4GN34 69 aa6.46□□□□□ -1.38
MTHFD1-204ENST00000553405 M0QZ58 72 aa6.44□□□□□ -1.38
MTHFD1-204ENST00000553405 PCP4P48539 62 aa6.41□□□□□ -1.38
MTHFD1-204ENST00000553405 KRTAP13-4Q3LI77 160 aa6.4□□□□□ -1.38
MTHFD1-204ENST00000553405 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
MTHFD1-204ENST00000553405 KRTAP10-5P60370 271 aa6.33□□□□□ -1.4
MTHFD1-204ENST00000553405 SEC61GP60059 68 aa6.31□□□□□ -1.4
MTHFD1-204ENST00000553405 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
MTHFD1-204ENST00000553405 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
MTHFD1-204ENST00000553405 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
MTHFD1-204ENST00000553405 A0A1B0GU69 56 aa6.28□□□□□ -1.4
MTHFD1-204ENST00000553405 A6NN06 94 aa6.27□□□□□ -1.41
MTHFD1-204ENST00000553405 A0A1B0GU33 70 aa6.26□□□□□ -1.41
MTHFD1-204ENST00000553405 MT1XP80297 61 aa6.26□□□□□ -1.41
MTHFD1-204ENST00000553405 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
MTHFD1-204ENST00000553405 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
MTHFD1-204ENST00000553405 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
MTHFD1-204ENST00000553405 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
MTHFD1-204ENST00000553405 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
MTHFD1-204ENST00000553405 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
MTHFD1-204ENST00000553405 PRR15LQ9BU68 103 aa6.16□□□□□ -1.42
MTHFD1-204ENST00000553405 RPS28P62857 69 aaKnown RBP6.14□□□□□ -1.43
MTHFD1-204ENST00000553405 Q1T7F1 81 aa6.13□□□□□ -1.43
MTHFD1-204ENST00000553405 A0A0D9SG42 100 aa6.12□□□□□ -1.43
MTHFD1-204ENST00000553405 H3BS24 57 aa6.12□□□□□ -1.43
MTHFD1-204ENST00000553405 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
MTHFD1-204ENST00000553405 SMIM26A0A096LP01 95 aa6.09□□□□□ -1.43
MTHFD1-204ENST00000553405 A8MU10 97 aa6.09□□□□□ -1.43
MTHFD1-204ENST00000553405 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
MTHFD1-204ENST00000553405 V9GYY9 64 aa6.07□□□□□ -1.44
MTHFD1-204ENST00000553405 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
MTHFD1-204ENST00000553405 KMT2DO14686 5537 aa6.04□□□□□ -1.44
MTHFD1-204ENST00000553405 UQCR11O14957 56 aa6.01□□□□□ -1.45
MTHFD1-204ENST00000553405 PSPHP1O15172 72 aa6.01□□□□□ -1.45
MTHFD1-204ENST00000553405 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
MTHFD1-204ENST00000553405 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
MTHFD1-204ENST00000553405 KRTAP10-7P60409 375 aaPredicted RBP5.96□□□□□ -1.46
MTHFD1-204ENST00000553405 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.46
MTHFD1-204ENST00000553405 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
MTHFD1-204ENST00000553405 KRTAP6-3Q3LI67 103 aa5.93□□□□□ -1.46
MTHFD1-204ENST00000553405 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
MTHFD1-204ENST00000553405 MUC12Q9UKN1 5478 aa5.87□□□□□ -1.47
MTHFD1-204ENST00000553405 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
MTHFD1-204ENST00000553405 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
MTHFD1-204ENST00000553405 KRTAP5-9P26371 169 aa5.85□□□□□ -1.47
MTHFD1-204ENST00000553405 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
MTHFD1-204ENST00000553405 NEBP20929 6669 aa5.79□□□□□ -1.48
MTHFD1-204ENST00000553405 A6NED7 52 aa5.79□□□□□ -1.48
MTHFD1-204ENST00000553405 MDN1Q9NU22 5596 aa5.78□□□□□ -1.48
MTHFD1-204ENST00000553405 KRTAP8-1Q8IUC2 63 aa5.76□□□□□ -1.49
MTHFD1-204ENST00000553405 SPRR2FQ96RM1 72 aa5.68□□□□□ -1.5
MTHFD1-204ENST00000553405 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
MTHFD1-204ENST00000553405 K7ERS5 55 aa5.63□□□□□ -1.51
MTHFD1-204ENST00000553405 TNP1P09430 55 aa5.62□□□□□ -1.51
MTHFD1-204ENST00000553405 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
MTHFD1-204ENST00000553405 A0A0A0MQY5 61 aa5.58□□□□□ -1.52
MTHFD1-204ENST00000553405 KRTAP4-12Q9BQ66 201 aa5.56□□□□□ -1.52
MTHFD1-204ENST00000553405 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
MTHFD1-204ENST00000553405 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
MTHFD1-204ENST00000553405 MT1EP04732 61 aa5.51□□□□□ -1.53
MTHFD1-204ENST00000553405 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
MTHFD1-204ENST00000553405 SPRR2EP22531 72 aa5.5□□□□□ -1.53
MTHFD1-204ENST00000553405 SPRR2BP35325 72 aa5.5□□□□□ -1.53
MTHFD1-204ENST00000553405 SPRR2AP35326 72 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms