RNA–Protein interactions for RNA: ENST00000552231.5

CNOT2-236, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 1,545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-236ENST00000552231 LCE2BO14633 110 aa9.19□□□□□ -0.94
CNOT2-236ENST00000552231 HRES1P13985 223 aa9.18□□□□□ -0.94
CNOT2-236ENST00000552231 C4orf26Q17RF5 130 aa9.18□□□□□ -0.94
CNOT2-236ENST00000552231 COA5Q86WW8 74 aa9.18□□□□□ -0.94
CNOT2-236ENST00000552231 IGKV2D-30A0A075B6S6 120 aa9.15□□□□□ -0.94
CNOT2-236ENST00000552231 MPLKIPQ8TAP9 179 aa9.15□□□□□ -0.94
CNOT2-236ENST00000552231 FLGP20930 4061 aaPredicted RBP9.15□□□□□ -0.94
CNOT2-236ENST00000552231 ACYP2P14621 99 aa9.13□□□□□ -0.95
CNOT2-236ENST00000552231 Q1T7F1 81 aa9.13□□□□□ -0.95
CNOT2-236ENST00000552231 C7orf65Q6ZTY9 151 aa9.12□□□□□ -0.95
CNOT2-236ENST00000552231 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
CNOT2-236ENST00000552231 COX6B2Q6YFQ2 88 aa9.1□□□□□ -0.95
CNOT2-236ENST00000552231 ATP11AUNQ6ZP68 121 aa9.1□□□□□ -0.95
CNOT2-236ENST00000552231 DMAC1Q96GE9 116 aa9.1□□□□□ -0.95
CNOT2-236ENST00000552231 KRTAP10-6P60371 365 aaPredicted RBP9.08□□□□□ -0.96
CNOT2-236ENST00000552231 M0R2T5 61 aa9.05□□□□□ -0.96
CNOT2-236ENST00000552231 CRCT1Q9UGL9 99 aa9.03□□□□□ -0.96
CNOT2-236ENST00000552231 FSIP2Q5CZC0 6907 aa9.01□□□□□ -0.97
CNOT2-236ENST00000552231 CHKB-CPT1BH3BT56 60 aa8.99□□□□□ -0.97
CNOT2-236ENST00000552231 A8MUN3 132 aa8.95□□□□□ -0.98
CNOT2-236ENST00000552231 SPINK7P58062 85 aa8.94□□□□□ -0.98
CNOT2-236ENST00000552231 LINC01558Q9Y6Z2 57 aa8.93□□□□□ -0.98
CNOT2-236ENST00000552231 PSPHP1O15172 72 aa8.92□□□□□ -0.98
CNOT2-236ENST00000552231 PRR15LQ9BU68 103 aa8.89□□□□□ -0.99
CNOT2-236ENST00000552231 Q5VV11 94 aa8.85□□□□□ -0.99
CNOT2-236ENST00000552231 BRK1Q8WUW1 75 aa8.79□□□□□ -1
CNOT2-236ENST00000552231 SPTSSBQ8NFR3 76 aa8.78□□□□□ -1
CNOT2-236ENST00000552231 KRTAP9-8Q9BYQ0 159 aa8.75□□□□□ -1.01
CNOT2-236ENST00000552231 PRO0628Q9UI54 55 aa8.75□□□□□ -1.01
CNOT2-236ENST00000552231 KRTAP3-1Q9BYR8 98 aa8.74□□□□□ -1.01
CNOT2-236ENST00000552231 A0A1B0GU69 56 aa8.7□□□□□ -1.02
CNOT2-236ENST00000552231 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
CNOT2-236ENST00000552231 A6NED7 52 aa8.68□□□□□ -1.02
CNOT2-236ENST00000552231 USH2AO75445 5202 aa8.62□□□□□ -1.03
CNOT2-236ENST00000552231 MT2AP02795 61 aa8.59□□□□□ -1.03
CNOT2-236ENST00000552231 CDC42SE1Q9NRR8 79 aa8.58□□□□□ -1.04
CNOT2-236ENST00000552231 SSPOA2VEC9 5147 aa8.56□□□□□ -1.04
CNOT2-236ENST00000552231 LCA10Q71F78 164 aa8.54□□□□□ -1.04
CNOT2-236ENST00000552231 MT1FP04733 61 aa8.52□□□□□ -1.05
CNOT2-236ENST00000552231 UQCR11O14957 56 aa8.49□□□□□ -1.05
CNOT2-236ENST00000552231 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
CNOT2-236ENST00000552231 S4R3F8 94 aa8.49□□□□□ -1.05
CNOT2-236ENST00000552231 KRTAP10-10P60014 251 aa8.48□□□□□ -1.05
CNOT2-236ENST00000552231 KRTAP9-3Q9BYQ3 159 aa8.48□□□□□ -1.05
CNOT2-236ENST00000552231 A8MU10 97 aa8.45□□□□□ -1.06
CNOT2-236ENST00000552231 SPATA8Q6RVD6 105 aa8.44□□□□□ -1.06
CNOT2-236ENST00000552231 MIR22HGQ0VDD5 57 aa8.42□□□□□ -1.06
CNOT2-236ENST00000552231 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.4□□□□□ -1.06
CNOT2-236ENST00000552231 FCGBPQ9Y6R7 5405 aaPredicted RBP8.39□□□□□ -1.07
CNOT2-236ENST00000552231 A0A1B0GU33 70 aa8.34□□□□□ -1.07
CNOT2-236ENST00000552231 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
CNOT2-236ENST00000552231 PMAIP1Q13794 54 aa8.34□□□□□ -1.08
CNOT2-236ENST00000552231 KRTAP9-7A8MTY7 169 aa8.33□□□□□ -1.08
CNOT2-236ENST00000552231 PRAC1Q96KF2 57 aa8.33□□□□□ -1.08
CNOT2-236ENST00000552231 CSAG1Q6PB30 78 aa8.27□□□□□ -1.09
CNOT2-236ENST00000552231 A6NN06 94 aa8.22□□□□□ -1.09
CNOT2-236ENST00000552231 H0YAA0 97 aa8.21□□□□□ -1.1
CNOT2-236ENST00000552231 KRTAP19-6Q3LI70 58 aa8.19□□□□□ -1.1
CNOT2-236ENST00000552231 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
CNOT2-236ENST00000552231 MACF1Q9UPN3 7388 aaKnown RBP8.13□□□□□ -1.11
CNOT2-236ENST00000552231 P0C880 135 aa8.08□□□□□ -1.12
CNOT2-236ENST00000552231 KTN1-AS1Q86SY8 53 aa8.07□□□□□ -1.12
CNOT2-236ENST00000552231 K7ERS5 55 aa8.03□□□□□ -1.12
CNOT2-236ENST00000552231 KRTAP13-4Q3LI77 160 aa8□□□□□ -1.13
CNOT2-236ENST00000552231 SYNE2Q8WXH0 6885 aaKnown RBP7.99□□□□□ -1.13
CNOT2-236ENST00000552231 M0QZ58 72 aa7.98□□□□□ -1.13
CNOT2-236ENST00000552231 A0A0D9SG42 100 aa7.92□□□□□ -1.14
CNOT2-236ENST00000552231 KRTAP6-3Q3LI67 103 aa7.85□□□□□ -1.15
CNOT2-236ENST00000552231 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
CNOT2-236ENST00000552231 R4GN34 69 aa7.83□□□□□ -1.16
CNOT2-236ENST00000552231 MT1BP07438 61 aa7.81□□□□□ -1.16
CNOT2-236ENST00000552231 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
CNOT2-236ENST00000552231 KRTAP12-1P59990 96 aa7.76□□□□□ -1.17
CNOT2-236ENST00000552231 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
CNOT2-236ENST00000552231 KRTAP12-2P59991 146 aa7.73□□□□□ -1.17
CNOT2-236ENST00000552231 ROMO1P60602 79 aa7.71□□□□□ -1.18
CNOT2-236ENST00000552231 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
CNOT2-236ENST00000552231 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
CNOT2-236ENST00000552231 KRTAP10-5P60370 271 aa7.66□□□□□ -1.18
CNOT2-236ENST00000552231 MUC12Q9UKN1 5478 aa7.59□□□□□ -1.19
CNOT2-236ENST00000552231 CAMK2N1Q7Z7J9 78 aa7.58□□□□□ -1.2
CNOT2-236ENST00000552231 NEBP20929 6669 aa7.54□□□□□ -1.2
CNOT2-236ENST00000552231 KRTAP25-1Q3LHN0 102 aa7.52□□□□□ -1.2
CNOT2-236ENST00000552231 KRTAP5-9P26371 169 aa7.46□□□□□ -1.22
CNOT2-236ENST00000552231 KRTAP19-4Q3LI73 84 aa7.46□□□□□ -1.22
CNOT2-236ENST00000552231 KMT2DO14686 5537 aa7.41□□□□□ -1.22
CNOT2-236ENST00000552231 MDN1Q9NU22 5596 aa7.4□□□□□ -1.23
CNOT2-236ENST00000552231 LUZP6Q538Z0 58 aa7.37□□□□□ -1.23
CNOT2-236ENST00000552231 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
CNOT2-236ENST00000552231 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
CNOT2-236ENST00000552231 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
CNOT2-236ENST00000552231 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
CNOT2-236ENST00000552231 MT1XP80297 61 aa7.29□□□□□ -1.24
CNOT2-236ENST00000552231 KRTAP20-1Q3LI63 56 aa7.29□□□□□ -1.24
CNOT2-236ENST00000552231 NDUFAF8A1L188 74 aa7.22□□□□□ -1.25
CNOT2-236ENST00000552231 SPRR2FQ96RM1 72 aa7.17□□□□□ -1.26
CNOT2-236ENST00000552231 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
CNOT2-236ENST00000552231 KRTAP2-3P0C7H8 128 aa7.1□□□□□ -1.27
CNOT2-236ENST00000552231 KRTAP2-4Q9BYR9 128 aa7.1□□□□□ -1.27
CNOT2-236ENST00000552231 TNP1P09430 55 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms