RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 USH2AO75445 5202 aa6.39□□□□□ -1.39
TROAP-213ENST00000550709 KRTAP9-7A8MTY7 169 aa6.38□□□□□ -1.39
TROAP-213ENST00000550709 TRAV7A0A075B6U4 112 aa6.36□□□□□ -1.39
TROAP-213ENST00000550709 A8MUN3 132 aa6.36□□□□□ -1.39
TROAP-213ENST00000550709 SMIM20Q8N5G0 67 aa6.35□□□□□ -1.39
TROAP-213ENST00000550709 NDUFC1O43677 76 aa6.34□□□□□ -1.39
TROAP-213ENST00000550709 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
TROAP-213ENST00000550709 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
TROAP-213ENST00000550709 DMAC1Q96GE9 116 aa6.26□□□□□ -1.41
TROAP-213ENST00000550709 SVIPQ8NHG7 77 aa6.25□□□□□ -1.41
TROAP-213ENST00000550709 SNURFQ9Y675 71 aa6.25□□□□□ -1.41
TROAP-213ENST00000550709 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
TROAP-213ENST00000550709 SERP2Q8N6R1 65 aa6.22□□□□□ -1.41
TROAP-213ENST00000550709 C20orf197Q8N268 126 aa6.2□□□□□ -1.42
TROAP-213ENST00000550709 ADM2Q7Z4H4 148 aa6.18□□□□□ -1.42
TROAP-213ENST00000550709 H0YAA0 97 aa6.17□□□□□ -1.42
TROAP-213ENST00000550709 SPRR2GQ9BYE4 73 aa6.17□□□□□ -1.42
TROAP-213ENST00000550709 ACYP2P14621 99 aa6.16□□□□□ -1.42
TROAP-213ENST00000550709 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
TROAP-213ENST00000550709 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
TROAP-213ENST00000550709 CRIPTQ9P021 101 aa6.13□□□□□ -1.43
TROAP-213ENST00000550709 Q5VV11 94 aa6.12□□□□□ -1.43
TROAP-213ENST00000550709 KRTAP19-8Q3LI54 63 aa6.1□□□□□ -1.43
TROAP-213ENST00000550709 MT1BP07438 61 aa6.09□□□□□ -1.43
TROAP-213ENST00000550709 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
TROAP-213ENST00000550709 P0C880 135 aa6.07□□□□□ -1.44
TROAP-213ENST00000550709 COX7CP15954 63 aa6.07□□□□□ -1.44
TROAP-213ENST00000550709 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
TROAP-213ENST00000550709 SPTSSBQ8NFR3 76 aa6.05□□□□□ -1.44
TROAP-213ENST00000550709 KRTAP3-2Q9BYR7 98 aa6.03□□□□□ -1.44
TROAP-213ENST00000550709 R4GN34 69 aa6□□□□□ -1.45
TROAP-213ENST00000550709 ANAPC13Q9BS18 74 aa5.99□□□□□ -1.45
TROAP-213ENST00000550709 CYSTM1Q9H1C7 97 aa5.98□□□□□ -1.45
TROAP-213ENST00000550709 A6NN06 94 aa5.97□□□□□ -1.45
TROAP-213ENST00000550709 M0QZ58 72 aa5.97□□□□□ -1.45
TROAP-213ENST00000550709 COA5Q86WW8 74 aa5.94□□□□□ -1.46
TROAP-213ENST00000550709 H7BZZ5 65 aa5.93□□□□□ -1.46
TROAP-213ENST00000550709 LINC01554Q52M75 96 aa5.91□□□□□ -1.46
TROAP-213ENST00000550709 KRTAP10-5P60370 271 aa5.9□□□□□ -1.46
TROAP-213ENST00000550709 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
TROAP-213ENST00000550709 CCDC179H3BU77 68 aa5.87□□□□□ -1.47
TROAP-213ENST00000550709 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
TROAP-213ENST00000550709 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
TROAP-213ENST00000550709 MT1XP80297 61 aa5.77□□□□□ -1.49
TROAP-213ENST00000550709 SEC61GP60059 68 aa5.76□□□□□ -1.49
TROAP-213ENST00000550709 PRO2289Q9P1D8 64 aa5.76□□□□□ -1.49
TROAP-213ENST00000550709 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
TROAP-213ENST00000550709 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
TROAP-213ENST00000550709 KRTAP6-3Q3LI67 103 aa5.71□□□□□ -1.5
TROAP-213ENST00000550709 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
TROAP-213ENST00000550709 A0A1B0GU33 70 aa5.64□□□□□ -1.51
TROAP-213ENST00000550709 TMEM258P61165 79 aa5.64□□□□□ -1.51
TROAP-213ENST00000550709 A0A0D9SG42 100 aa5.63□□□□□ -1.51
TROAP-213ENST00000550709 A0A1B0GU69 56 aa5.63□□□□□ -1.51
TROAP-213ENST00000550709 SPATA8Q6RVD6 105 aa5.63□□□□□ -1.51
TROAP-213ENST00000550709 NEBP20929 6669 aa5.6□□□□□ -1.51
TROAP-213ENST00000550709 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
TROAP-213ENST00000550709 PCP4P48539 62 aa5.55□□□□□ -1.52
TROAP-213ENST00000550709 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
TROAP-213ENST00000550709 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
TROAP-213ENST00000550709 MUC12Q9UKN1 5478 aa5.54□□□□□ -1.52
TROAP-213ENST00000550709 KMT2DO14686 5537 aa5.53□□□□□ -1.52
TROAP-213ENST00000550709 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
TROAP-213ENST00000550709 SPINT4Q6UDR6 99 aa5.52□□□□□ -1.53
TROAP-213ENST00000550709 PRR15LQ9BU68 103 aa5.51□□□□□ -1.53
TROAP-213ENST00000550709 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
TROAP-213ENST00000550709 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
TROAP-213ENST00000550709 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
TROAP-213ENST00000550709 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
TROAP-213ENST00000550709 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
TROAP-213ENST00000550709 SMIM26A0A096LP01 95 aa5.47□□□□□ -1.53
TROAP-213ENST00000550709 A8MU10 97 aa5.47□□□□□ -1.53
TROAP-213ENST00000550709 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
TROAP-213ENST00000550709 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
TROAP-213ENST00000550709 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
TROAP-213ENST00000550709 MDN1Q9NU22 5596 aa5.39□□□□□ -1.55
TROAP-213ENST00000550709 UQCR11O14957 56 aa5.32□□□□□ -1.56
TROAP-213ENST00000550709 SPRR2EP22531 72 aa5.32□□□□□ -1.56
TROAP-213ENST00000550709 SPRR2BP35325 72 aa5.32□□□□□ -1.56
TROAP-213ENST00000550709 SPRR2AP35326 72 aa5.32□□□□□ -1.56
TROAP-213ENST00000550709 V9GYY9 64 aa5.3□□□□□ -1.56
TROAP-213ENST00000550709 PSPHP1O15172 72 aa5.28□□□□□ -1.56
TROAP-213ENST00000550709 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
TROAP-213ENST00000550709 Q1T7F1 81 aa5.26□□□□□ -1.57
TROAP-213ENST00000550709 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
TROAP-213ENST00000550709 KRTAP2-3P0C7H8 128 aa5.25□□□□□ -1.57
TROAP-213ENST00000550709 KRTAP2-4Q9BYR9 128 aa5.25□□□□□ -1.57
TROAP-213ENST00000550709 MIR22HGQ0VDD5 57 aa5.24□□□□□ -1.57
TROAP-213ENST00000550709 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
TROAP-213ENST00000550709 TNP1P09430 55 aa5.15□□□□□ -1.59
TROAP-213ENST00000550709 SPRR2DP22532 72 aa5.15□□□□□ -1.59
TROAP-213ENST00000550709 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
TROAP-213ENST00000550709 A6NED7 52 aa5.1□□□□□ -1.59
TROAP-213ENST00000550709 K7ERS5 55 aa5.1□□□□□ -1.59
TROAP-213ENST00000550709 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
TROAP-213ENST00000550709 MT1EP04732 61 aa5.09□□□□□ -1.59
TROAP-213ENST00000550709 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
TROAP-213ENST00000550709 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
TROAP-213ENST00000550709 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
TROAP-213ENST00000550709 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms