RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 KRTAP16-1A8MUX0 517 aa4.19□□□□□ -1.74
TROAP-208ENST00000548817 HRES1P13985 223 aa4.19□□□□□ -1.74
TROAP-208ENST00000548817 DEFB116Q30KQ4 102 aa4.18□□□□□ -1.74
TROAP-208ENST00000548817 WFDC13Q8IUB5 93 aa4.18□□□□□ -1.74
TROAP-208ENST00000548817 ZCCHC13Q8WW36 166 aaKnown RBP4.18□□□□□ -1.74
TROAP-208ENST00000548817 CYP4F30PQ9H0H9 118 aa4.18□□□□□ -1.74
TROAP-208ENST00000548817 V9GYY9 64 aa4.18□□□□□ -1.74
TROAP-208ENST00000548817 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
TROAP-208ENST00000548817 KMT2DO14686 5537 aa4.17□□□□□ -1.74
TROAP-208ENST00000548817 SPANXA2-OT1Q8N9U9 137 aa4.17□□□□□ -1.74
TROAP-208ENST00000548817 MPLKIPQ8TAP9 179 aa4.17□□□□□ -1.74
TROAP-208ENST00000548817 C8orf87E5RJ46 101 aa4.16□□□□□ -1.74
TROAP-208ENST00000548817 H0Y9P7 68 aa4.16□□□□□ -1.74
TROAP-208ENST00000548817 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
TROAP-208ENST00000548817 NOTCH2NLQ7Z3S9 236 aa4.16□□□□□ -1.74
TROAP-208ENST00000548817 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
TROAP-208ENST00000548817 TRAV22A0A0B4J277 110 aa4.15□□□□□ -1.75
TROAP-208ENST00000548817 LINC00208Q96KT6 92 aa4.15□□□□□ -1.75
TROAP-208ENST00000548817 C4orf26Q17RF5 130 aa4.14□□□□□ -1.75
TROAP-208ENST00000548817 A0A1B0GVX0 72 aa4.13□□□□□ -1.75
TROAP-208ENST00000548817 C1orf64Q8NEQ6 169 aa4.13□□□□□ -1.75
TROAP-208ENST00000548817 C8orf17Q9NRJ1 99 aa4.13□□□□□ -1.75
TROAP-208ENST00000548817 MMP24-AS1A0A0U1RRL7 71 aa4.12□□□□□ -1.75
TROAP-208ENST00000548817 SPINK7P58062 85 aa4.12□□□□□ -1.75
TROAP-208ENST00000548817 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
TROAP-208ENST00000548817 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
TROAP-208ENST00000548817 Q1T7F1 81 aa4.1□□□□□ -1.75
TROAP-208ENST00000548817 MRPL34Q9BQ48 92 aaKnown RBP4.1□□□□□ -1.75
TROAP-208ENST00000548817 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
TROAP-208ENST00000548817 NDUFS5O43920 106 aa4.09□□□□□ -1.75
TROAP-208ENST00000548817 LOC101927531A0A1B0GV80 90 aa4.08□□□□□ -1.76
TROAP-208ENST00000548817 Q8N9P0 234 aaPredicted RBP4.05□□□□□ -1.76
TROAP-208ENST00000548817 BRK1Q8WUW1 75 aa4.02□□□□□ -1.77
TROAP-208ENST00000548817 H1FX-AS1Q4G0G2 97 aa4.01□□□□□ -1.77
TROAP-208ENST00000548817 COA5Q86WW8 74 aa4□□□□□ -1.77
TROAP-208ENST00000548817 A6NN06 94 aa3.99□□□□□ -1.77
TROAP-208ENST00000548817 ACYP2P14621 99 aa3.99□□□□□ -1.77
TROAP-208ENST00000548817 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
TROAP-208ENST00000548817 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
TROAP-208ENST00000548817 CHKB-CPT1BH3BT56 60 aa3.95□□□□□ -1.78
TROAP-208ENST00000548817 PSPHP1O15172 72 aa3.95□□□□□ -1.78
TROAP-208ENST00000548817 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
TROAP-208ENST00000548817 LINC01558Q9Y6Z2 57 aa3.95□□□□□ -1.78
TROAP-208ENST00000548817 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
TROAP-208ENST00000548817 A8MUN3 132 aa3.94□□□□□ -1.78
TROAP-208ENST00000548817 IGKV2-30P06310 120 aa3.94□□□□□ -1.78
TROAP-208ENST00000548817 Q5VV11 94 aa3.92□□□□□ -1.78
TROAP-208ENST00000548817 C7orf65Q6ZTY9 151 aa3.92□□□□□ -1.78
TROAP-208ENST00000548817 A6NED7 52 aa3.91□□□□□ -1.78
TROAP-208ENST00000548817 Q5W150 140 aa3.91□□□□□ -1.78
TROAP-208ENST00000548817 DMAC1Q96GE9 116 aa3.9□□□□□ -1.79
TROAP-208ENST00000548817 SPTSSBQ8NFR3 76 aa3.89□□□□□ -1.79
TROAP-208ENST00000548817 SPRR2EP22531 72 aa3.88□□□□□ -1.79
TROAP-208ENST00000548817 SPRR2BP35325 72 aa3.88□□□□□ -1.79
TROAP-208ENST00000548817 SPRR2AP35326 72 aa3.88□□□□□ -1.79
TROAP-208ENST00000548817 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
TROAP-208ENST00000548817 CDC42SE1Q9NRR8 79 aa3.87□□□□□ -1.79
TROAP-208ENST00000548817 A0A1B0GU69 56 aa3.84□□□□□ -1.79
TROAP-208ENST00000548817 PMAIP1Q13794 54 aa3.84□□□□□ -1.79
TROAP-208ENST00000548817 CSAG1Q6PB30 78 aa3.84□□□□□ -1.79
TROAP-208ENST00000548817 SEC61GP60059 68 aa3.83□□□□□ -1.8
TROAP-208ENST00000548817 S4R3F8 94 aa3.83□□□□□ -1.8
TROAP-208ENST00000548817 MT1BP07438 61 aa3.82□□□□□ -1.8
TROAP-208ENST00000548817 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
TROAP-208ENST00000548817 UQCR11O14957 56 aa3.79□□□□□ -1.8
TROAP-208ENST00000548817 KRTAP19-8Q3LI54 63 aa3.78□□□□□ -1.8
TROAP-208ENST00000548817 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
TROAP-208ENST00000548817 LCA10Q71F78 164 aa3.78□□□□□ -1.8
TROAP-208ENST00000548817 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
TROAP-208ENST00000548817 SPRR2DP22532 72 aa3.76□□□□□ -1.81
TROAP-208ENST00000548817 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
TROAP-208ENST00000548817 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
TROAP-208ENST00000548817 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
TROAP-208ENST00000548817 KRTAP3-1Q9BYR8 98 aa3.74□□□□□ -1.81
TROAP-208ENST00000548817 CRIPTQ9P021 101 aa3.72□□□□□ -1.81
TROAP-208ENST00000548817 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
TROAP-208ENST00000548817 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
TROAP-208ENST00000548817 A8MU10 97 aa3.66□□□□□ -1.82
TROAP-208ENST00000548817 K7ERS5 55 aa3.66□□□□□ -1.82
TROAP-208ENST00000548817 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
TROAP-208ENST00000548817 KRTAP3-3Q9BYR6 98 aa3.65□□□□□ -1.83
TROAP-208ENST00000548817 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
TROAP-208ENST00000548817 A0A1B0GU33 70 aa3.63□□□□□ -1.83
TROAP-208ENST00000548817 PLAC4Q8WY50 150 aa3.61□□□□□ -1.83
TROAP-208ENST00000548817 H0YAA0 97 aa3.59□□□□□ -1.83
TROAP-208ENST00000548817 ADM2Q7Z4H4 148 aa3.57□□□□□ -1.84
TROAP-208ENST00000548817 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
TROAP-208ENST00000548817 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
TROAP-208ENST00000548817 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
TROAP-208ENST00000548817 KRTAP4-9Q9BYQ8 210 aa3.54□□□□□ -1.84
TROAP-208ENST00000548817 MT1XP80297 61 aa3.52□□□□□ -1.85
TROAP-208ENST00000548817 R4GN34 69 aa3.52□□□□□ -1.85
TROAP-208ENST00000548817 M0QZ58 72 aa3.47□□□□□ -1.85
TROAP-208ENST00000548817 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
TROAP-208ENST00000548817 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
TROAP-208ENST00000548817 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
TROAP-208ENST00000548817 KRTAP4-8A0A0G2JLE6 195 aa3.44□□□□□ -1.86
TROAP-208ENST00000548817 KRTAP4-8Q9BYQ9 185 aa3.44□□□□□ -1.86
TROAP-208ENST00000548817 P0C880 135 aa3.43□□□□□ -1.86
TROAP-208ENST00000548817 ROMO1P60602 79 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms