RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 COX7CP15954 63 aa8.21□□□□□ -1.1
LETMD1-216ENST00000548401 MT1FP04733 61 aa8.19□□□□□ -1.1
LETMD1-216ENST00000548401 CSAG1Q6PB30 78 aa8.13□□□□□ -1.11
LETMD1-216ENST00000548401 ANAPC13Q9BS18 74 aa8.13□□□□□ -1.11
LETMD1-216ENST00000548401 KRTAP9-2Q9BYQ4 174 aa8.13□□□□□ -1.11
LETMD1-216ENST00000548401 SPANXA2-OT1Q8N9U9 137 aa8.1□□□□□ -1.11
LETMD1-216ENST00000548401 CYSTM1Q9H1C7 97 aa8.09□□□□□ -1.11
LETMD1-216ENST00000548401 KRTAP10-10P60014 251 aa8.08□□□□□ -1.12
LETMD1-216ENST00000548401 NDUFC1O43677 76 aa8.06□□□□□ -1.12
LETMD1-216ENST00000548401 KRTAP9-3Q9BYQ3 159 aa8.03□□□□□ -1.12
LETMD1-216ENST00000548401 H7BZZ5 65 aa8.02□□□□□ -1.13
LETMD1-216ENST00000548401 ACYP2P14621 99 aa8.01□□□□□ -1.13
LETMD1-216ENST00000548401 CCDC179H3BU77 68 aa7.99□□□□□ -1.13
LETMD1-216ENST00000548401 H0YAA0 97 aa7.95□□□□□ -1.14
LETMD1-216ENST00000548401 LCE2BO14633 110 aa7.91□□□□□ -1.14
LETMD1-216ENST00000548401 CHKB-CPT1BH3BT56 60 aa7.86□□□□□ -1.15
LETMD1-216ENST00000548401 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
LETMD1-216ENST00000548401 COA5Q86WW8 74 aa7.84□□□□□ -1.15
LETMD1-216ENST00000548401 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
LETMD1-216ENST00000548401 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
LETMD1-216ENST00000548401 SPRR2GQ9BYE4 73 aa7.79□□□□□ -1.16
LETMD1-216ENST00000548401 P0C880 135 aa7.76□□□□□ -1.17
LETMD1-216ENST00000548401 CRIPTQ9P021 101 aa7.76□□□□□ -1.17
LETMD1-216ENST00000548401 USH2AO75445 5202 aa7.75□□□□□ -1.17
LETMD1-216ENST00000548401 ATP5EP56381 51 aaPredicted RBP7.74□□□□□ -1.17
LETMD1-216ENST00000548401 CRCT1Q9UGL9 99 aa7.74□□□□□ -1.17
LETMD1-216ENST00000548401 KRTAP9-6A0A140TA67 174 aa7.71□□□□□ -1.18
LETMD1-216ENST00000548401 TMEM258P61165 79 aa7.71□□□□□ -1.18
LETMD1-216ENST00000548401 FSIP2Q5CZC0 6907 aa7.68□□□□□ -1.18
LETMD1-216ENST00000548401 KRTAP19-8Q3LI54 63 aa7.68□□□□□ -1.18
LETMD1-216ENST00000548401 MT1BP07438 61 aa7.64□□□□□ -1.19
LETMD1-216ENST00000548401 Q5VV11 94 aa7.59□□□□□ -1.19
LETMD1-216ENST00000548401 SSPOA2VEC9 5147 aa7.59□□□□□ -1.19
LETMD1-216ENST00000548401 R4GN34 69 aa7.58□□□□□ -1.2
LETMD1-216ENST00000548401 M0QZ58 72 aa7.56□□□□□ -1.2
LETMD1-216ENST00000548401 KRTAP19-6Q3LI70 58 aa7.56□□□□□ -1.2
LETMD1-216ENST00000548401 PCP4P48539 62 aa7.52□□□□□ -1.21
LETMD1-216ENST00000548401 SEC61GP60059 68 aa7.45□□□□□ -1.22
LETMD1-216ENST00000548401 KRTAP13-4Q3LI77 160 aa7.45□□□□□ -1.22
LETMD1-216ENST00000548401 SERP1Q9Y6X1 66 aa7.45□□□□□ -1.22
LETMD1-216ENST00000548401 LINC01554Q52M75 96 aa7.4□□□□□ -1.22
LETMD1-216ENST00000548401 A0A1B0GU69 56 aa7.39□□□□□ -1.23
LETMD1-216ENST00000548401 FCGBPQ9Y6R7 5405 aaPredicted RBP7.38□□□□□ -1.23
LETMD1-216ENST00000548401 LINC01558Q9Y6Z2 57 aa7.36□□□□□ -1.23
LETMD1-216ENST00000548401 KRTAP10-5P60370 271 aa7.35□□□□□ -1.23
LETMD1-216ENST00000548401 A0A1B0GU33 70 aa7.34□□□□□ -1.23
LETMD1-216ENST00000548401 A6NN06 94 aa7.31□□□□□ -1.24
LETMD1-216ENST00000548401 PLAC4Q8WY50 150 aa7.31□□□□□ -1.24
LETMD1-216ENST00000548401 SPATA8Q6RVD6 105 aa7.28□□□□□ -1.24
LETMD1-216ENST00000548401 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
LETMD1-216ENST00000548401 MT1XP80297 61 aa7.26□□□□□ -1.25
LETMD1-216ENST00000548401 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.22□□□□□ -1.25
LETMD1-216ENST00000548401 A0A0D9SG42 100 aa7.18□□□□□ -1.26
LETMD1-216ENST00000548401 RPS28P62857 69 aaKnown RBP7.17□□□□□ -1.26
LETMD1-216ENST00000548401 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
LETMD1-216ENST00000548401 Q1T7F1 81 aa7.16□□□□□ -1.26
LETMD1-216ENST00000548401 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.26
LETMD1-216ENST00000548401 V9GYY9 64 aa7.14□□□□□ -1.27
LETMD1-216ENST00000548401 A8MU10 97 aa7.11□□□□□ -1.27
LETMD1-216ENST00000548401 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
LETMD1-216ENST00000548401 PSPHP1O15172 72 aa7.06□□□□□ -1.28
LETMD1-216ENST00000548401 KRTAP12-2P59991 146 aa7.06□□□□□ -1.28
LETMD1-216ENST00000548401 UQCR11O14957 56 aa7.05□□□□□ -1.28
LETMD1-216ENST00000548401 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
LETMD1-216ENST00000548401 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
LETMD1-216ENST00000548401 CAMK2N1Q7Z7J9 78 aa7.02□□□□□ -1.29
LETMD1-216ENST00000548401 H3BS24 57 aa7.01□□□□□ -1.29
LETMD1-216ENST00000548401 KRTAP9-7A8MTY7 169 aa6.98□□□□□ -1.29
LETMD1-216ENST00000548401 MIR22HGQ0VDD5 57 aa6.94□□□□□ -1.3
LETMD1-216ENST00000548401 KRTAP10-7P60409 375 aaPredicted RBP6.93□□□□□ -1.3
LETMD1-216ENST00000548401 SVIPQ8NHG7 77 aa6.9□□□□□ -1.3
LETMD1-216ENST00000548401 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
LETMD1-216ENST00000548401 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
LETMD1-216ENST00000548401 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
LETMD1-216ENST00000548401 KRTAP6-3Q3LI67 103 aa6.87□□□□□ -1.31
LETMD1-216ENST00000548401 A6NED7 52 aa6.83□□□□□ -1.32
LETMD1-216ENST00000548401 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
LETMD1-216ENST00000548401 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
LETMD1-216ENST00000548401 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
LETMD1-216ENST00000548401 KMT2DO14686 5537 aa6.77□□□□□ -1.33
LETMD1-216ENST00000548401 KRTAP5-9P26371 169 aa6.77□□□□□ -1.33
LETMD1-216ENST00000548401 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
LETMD1-216ENST00000548401 KRTAP8-1Q8IUC2 63 aa6.73□□□□□ -1.33
LETMD1-216ENST00000548401 K7ERS5 55 aa6.68□□□□□ -1.34
LETMD1-216ENST00000548401 CDC42SE1Q9NRR8 79 aa6.65□□□□□ -1.34
LETMD1-216ENST00000548401 SPRR2FQ96RM1 72 aa6.62□□□□□ -1.35
LETMD1-216ENST00000548401 TNP1P09430 55 aa6.59□□□□□ -1.35
LETMD1-216ENST00000548401 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
LETMD1-216ENST00000548401 KRTAP19-7Q3SYF9 63 aa6.49□□□□□ -1.37
LETMD1-216ENST00000548401 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
LETMD1-216ENST00000548401 KRTAP25-1Q3LHN0 102 aa6.46□□□□□ -1.38
LETMD1-216ENST00000548401 LCE1AQ5T7P2 110 aa6.44□□□□□ -1.38
LETMD1-216ENST00000548401 NEBP20929 6669 aa6.42□□□□□ -1.38
LETMD1-216ENST00000548401 SPRR2EP22531 72 aa6.42□□□□□ -1.38
LETMD1-216ENST00000548401 SPRR2BP35325 72 aa6.42□□□□□ -1.38
LETMD1-216ENST00000548401 SPRR2AP35326 72 aa6.42□□□□□ -1.38
LETMD1-216ENST00000548401 MT1EP04732 61 aa6.41□□□□□ -1.38
LETMD1-216ENST00000548401 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
LETMD1-216ENST00000548401 MDN1Q9NU22 5596 aa6.4□□□□□ -1.38
LETMD1-216ENST00000548401 ROMO1P60602 79 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms