RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 ACYP2P14621 99 aa7.94□□□□□ -1.14
HECTD4-206ENST00000548140 LCA10Q71F78 164 aa7.93□□□□□ -1.14
HECTD4-206ENST00000548140 PCP4P48539 62 aa7.92□□□□□ -1.14
HECTD4-206ENST00000548140 KRTAP9-6A0A140TA67 174 aa7.87□□□□□ -1.15
HECTD4-206ENST00000548140 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
HECTD4-206ENST00000548140 CSAG1Q6PB30 78 aa7.84□□□□□ -1.15
HECTD4-206ENST00000548140 CHKB-CPT1BH3BT56 60 aa7.82□□□□□ -1.16
HECTD4-206ENST00000548140 KRTAP10-6P60371 365 aaPredicted RBP7.82□□□□□ -1.16
HECTD4-206ENST00000548140 TMEM258P61165 79 aa7.81□□□□□ -1.16
HECTD4-206ENST00000548140 ATP5EP56381 51 aaPredicted RBP7.8□□□□□ -1.16
HECTD4-206ENST00000548140 COA5Q86WW8 74 aa7.78□□□□□ -1.16
HECTD4-206ENST00000548140 LORP23490 312 aaPredicted RBP7.77□□□□□ -1.17
HECTD4-206ENST00000548140 SPTSSBQ8NFR3 76 aa7.72□□□□□ -1.17
HECTD4-206ENST00000548140 KRTAP9-8Q9BYQ0 159 aa7.69□□□□□ -1.18
HECTD4-206ENST00000548140 MT2AP02795 61 aa7.65□□□□□ -1.18
HECTD4-206ENST00000548140 FSIP2Q5CZC0 6907 aa7.63□□□□□ -1.19
HECTD4-206ENST00000548140 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
HECTD4-206ENST00000548140 H0YAA0 97 aa7.6□□□□□ -1.19
HECTD4-206ENST00000548140 MT1FP04733 61 aa7.6□□□□□ -1.19
HECTD4-206ENST00000548140 LCE2DQ5TA82 110 aaPredicted RBP7.58□□□□□ -1.2
HECTD4-206ENST00000548140 SERP1Q9Y6X1 66 aa7.58□□□□□ -1.2
HECTD4-206ENST00000548140 ADM2Q7Z4H4 148 aa7.57□□□□□ -1.2
HECTD4-206ENST00000548140 CRCT1Q9UGL9 99 aa7.55□□□□□ -1.2
HECTD4-206ENST00000548140 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
HECTD4-206ENST00000548140 P0C880 135 aa7.47□□□□□ -1.21
HECTD4-206ENST00000548140 SEC61GP60059 68 aa7.44□□□□□ -1.22
HECTD4-206ENST00000548140 KRTAP9-3Q9BYQ3 159 aa7.44□□□□□ -1.22
HECTD4-206ENST00000548140 CRIPTQ9P021 101 aa7.4□□□□□ -1.22
HECTD4-206ENST00000548140 RPS28P62857 69 aaKnown RBP7.38□□□□□ -1.23
HECTD4-206ENST00000548140 A0A1B0GU69 56 aa7.37□□□□□ -1.23
HECTD4-206ENST00000548140 LINC01558Q9Y6Z2 57 aa7.35□□□□□ -1.23
HECTD4-206ENST00000548140 R4GN34 69 aa7.34□□□□□ -1.23
HECTD4-206ENST00000548140 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
HECTD4-206ENST00000548140 SMIM26A0A096LP01 95 aa7.32□□□□□ -1.24
HECTD4-206ENST00000548140 SPRR2GQ9BYE4 73 aa7.32□□□□□ -1.24
HECTD4-206ENST00000548140 M0QZ58 72 aa7.31□□□□□ -1.24
HECTD4-206ENST00000548140 PRR15LQ9BU68 103 aa7.31□□□□□ -1.24
HECTD4-206ENST00000548140 LCE2BO14633 110 aa7.28□□□□□ -1.24
HECTD4-206ENST00000548140 V9GYY9 64 aa7.27□□□□□ -1.24
HECTD4-206ENST00000548140 Q1T7F1 81 aa7.26□□□□□ -1.25
HECTD4-206ENST00000548140 A0A1B0GU33 70 aa7.25□□□□□ -1.25
HECTD4-206ENST00000548140 KRTAP13-4Q3LI77 160 aa7.19□□□□□ -1.26
HECTD4-206ENST00000548140 LINC01554Q52M75 96 aa7.19□□□□□ -1.26
HECTD4-206ENST00000548140 PSPHP1O15172 72 aa7.18□□□□□ -1.26
HECTD4-206ENST00000548140 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
HECTD4-206ENST00000548140 Q5VV11 94 aa7.16□□□□□ -1.26
HECTD4-206ENST00000548140 SPATA8Q6RVD6 105 aa7.16□□□□□ -1.26
HECTD4-206ENST00000548140 MT1BP07438 61 aa7.11□□□□□ -1.27
HECTD4-206ENST00000548140 USH2AO75445 5202 aa7.08□□□□□ -1.28
HECTD4-206ENST00000548140 A0A0D9SG42 100 aa7.08□□□□□ -1.28
HECTD4-206ENST00000548140 UQCR11O14957 56 aa7.08□□□□□ -1.28
HECTD4-206ENST00000548140 KRTAP9-7A8MTY7 169 aa7.04□□□□□ -1.28
HECTD4-206ENST00000548140 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.04□□□□□ -1.28
HECTD4-206ENST00000548140 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
HECTD4-206ENST00000548140 A6NN06 94 aa7.01□□□□□ -1.29
HECTD4-206ENST00000548140 A8MU10 97 aa7.01□□□□□ -1.29
HECTD4-206ENST00000548140 SSPOA2VEC9 5147 aa6.99□□□□□ -1.29
HECTD4-206ENST00000548140 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
HECTD4-206ENST00000548140 A6NED7 52 aa6.96□□□□□ -1.3
HECTD4-206ENST00000548140 SPINT4Q6UDR6 99 aa6.93□□□□□ -1.3
HECTD4-206ENST00000548140 KRTAP19-6Q3LI70 58 aa6.93□□□□□ -1.3
HECTD4-206ENST00000548140 KRTAP12-1P59990 96 aa6.92□□□□□ -1.3
HECTD4-206ENST00000548140 KRTAP12-2P59991 146 aa6.87□□□□□ -1.31
HECTD4-206ENST00000548140 KRTAP10-5P60370 271 aa6.84□□□□□ -1.32
HECTD4-206ENST00000548140 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.32
HECTD4-206ENST00000548140 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
HECTD4-206ENST00000548140 MT1XP80297 61 aa6.81□□□□□ -1.32
HECTD4-206ENST00000548140 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
HECTD4-206ENST00000548140 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
HECTD4-206ENST00000548140 CDC42SE1Q9NRR8 79 aa6.76□□□□□ -1.33
HECTD4-206ENST00000548140 SYNE2Q8WXH0 6885 aaKnown RBP6.75□□□□□ -1.33
HECTD4-206ENST00000548140 K7ERS5 55 aa6.74□□□□□ -1.33
HECTD4-206ENST00000548140 BRK1Q8WUW1 75 aa6.63□□□□□ -1.35
HECTD4-206ENST00000548140 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
HECTD4-206ENST00000548140 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
HECTD4-206ENST00000548140 KRTAP10-12P60413 245 aa6.46□□□□□ -1.38
HECTD4-206ENST00000548140 KRTAP6-3Q3LI67 103 aa6.45□□□□□ -1.38
HECTD4-206ENST00000548140 TNP1P09430 55 aa6.44□□□□□ -1.38
HECTD4-206ENST00000548140 ROMO1P60602 79 aa6.39□□□□□ -1.39
HECTD4-206ENST00000548140 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
HECTD4-206ENST00000548140 KRTAP4-8Q9BYQ9 185 aa6.36□□□□□ -1.39
HECTD4-206ENST00000548140 KRTAP25-1Q3LHN0 102 aa6.33□□□□□ -1.4
HECTD4-206ENST00000548140 NEBP20929 6669 aa6.33□□□□□ -1.4
HECTD4-206ENST00000548140 KRTAP8-1Q8IUC2 63 aa6.3□□□□□ -1.4
HECTD4-206ENST00000548140 KMT2DO14686 5537 aa6.28□□□□□ -1.4
HECTD4-206ENST00000548140 PRO0628Q9UI54 55 aa6.27□□□□□ -1.41
HECTD4-206ENST00000548140 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
HECTD4-206ENST00000548140 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
HECTD4-206ENST00000548140 MUC12Q9UKN1 5478 aa6.21□□□□□ -1.42
HECTD4-206ENST00000548140 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
HECTD4-206ENST00000548140 KRTAP5-9P26371 169 aa6.15□□□□□ -1.43
HECTD4-206ENST00000548140 SPRR2FQ96RM1 72 aa6.14□□□□□ -1.43
HECTD4-206ENST00000548140 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
HECTD4-206ENST00000548140 KRTAP19-5Q3LI72 72 aa6.08□□□□□ -1.44
HECTD4-206ENST00000548140 KRTAP19-7Q3SYF9 63 aa6.07□□□□□ -1.44
HECTD4-206ENST00000548140 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
HECTD4-206ENST00000548140 MT1EP04732 61 aa5.99□□□□□ -1.45
HECTD4-206ENST00000548140 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
HECTD4-206ENST00000548140 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
HECTD4-206ENST00000548140 SPRR2EP22531 72 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms