RNA–Protein interactions for RNA: ENST00000548021.5

CNOT2-208, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-208ENST00000548021 Q1T7F1 81 aa4.6□□□□□ -1.67
CNOT2-208ENST00000548021 EPPK1P58107 5090 aaKnown RBP4.58□□□□□ -1.68
CNOT2-208ENST00000548021 C7orf65Q6ZTY9 151 aa4.58□□□□□ -1.68
CNOT2-208ENST00000548021 Q75L30 129 aa4.57□□□□□ -1.68
CNOT2-208ENST00000548021 ACYP2P14621 99 aa4.55□□□□□ -1.68
CNOT2-208ENST00000548021 V9GYY9 64 aa4.54□□□□□ -1.68
CNOT2-208ENST00000548021 A8MUN3 132 aa4.52□□□□□ -1.69
CNOT2-208ENST00000548021 PSPHP1O15172 72 aa4.52□□□□□ -1.69
CNOT2-208ENST00000548021 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
CNOT2-208ENST00000548021 RPL37P61927 97 aaKnown RBP4.51□□□□□ -1.69
CNOT2-208ENST00000548021 Q5VV11 94 aa4.51□□□□□ -1.69
CNOT2-208ENST00000548021 LINC01558Q9Y6Z2 57 aa4.51□□□□□ -1.69
CNOT2-208ENST00000548021 H3BS24 57 aa4.5□□□□□ -1.69
CNOT2-208ENST00000548021 PRR15LQ9BU68 103 aa4.5□□□□□ -1.69
CNOT2-208ENST00000548021 DMBT1Q9UGM3 2413 aaPredicted RBP4.49□□□□□ -1.69
CNOT2-208ENST00000548021 SPINK7P58062 85 aa4.49□□□□□ -1.69
CNOT2-208ENST00000548021 CHKB-CPT1BH3BT56 60 aa4.48□□□□□ -1.69
CNOT2-208ENST00000548021 MYCBP2O75592 4640 aa4.48□□□□□ -1.69
CNOT2-208ENST00000548021 KRTAP3-1Q9BYR8 98 aa4.47□□□□□ -1.69
CNOT2-208ENST00000548021 ATP11AUNQ6ZP68 121 aa4.45□□□□□ -1.7
CNOT2-208ENST00000548021 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
CNOT2-208ENST00000548021 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
CNOT2-208ENST00000548021 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
CNOT2-208ENST00000548021 COX6B2Q6YFQ2 88 aa4.42□□□□□ -1.7
CNOT2-208ENST00000548021 BIRC6Q9NR09 4857 aa4.42□□□□□ -1.7
CNOT2-208ENST00000548021 PRO0628Q9UI54 55 aa4.41□□□□□ -1.7
CNOT2-208ENST00000548021 HERC2O95714 4834 aa4.4□□□□□ -1.71
CNOT2-208ENST00000548021 ABCA13Q86UQ4 5058 aa4.39□□□□□ -1.71
CNOT2-208ENST00000548021 A8MU10 97 aa4.38□□□□□ -1.71
CNOT2-208ENST00000548021 A6NED7 52 aa4.36□□□□□ -1.71
CNOT2-208ENST00000548021 A0A1B0GU69 56 aa4.35□□□□□ -1.71
CNOT2-208ENST00000548021 LCA10Q71F78 164 aa4.35□□□□□ -1.71
CNOT2-208ENST00000548021 SPTSSBQ8NFR3 76 aa4.34□□□□□ -1.71
CNOT2-208ENST00000548021 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
CNOT2-208ENST00000548021 LPAP08519 4548 aa4.29□□□□□ -1.72
CNOT2-208ENST00000548021 LRP2P98164 4655 aa4.28□□□□□ -1.72
CNOT2-208ENST00000548021 S4R3F8 94 aa4.27□□□□□ -1.73
CNOT2-208ENST00000548021 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
CNOT2-208ENST00000548021 UQCR11O14957 56 aa4.25□□□□□ -1.73
CNOT2-208ENST00000548021 SEC61GP60059 68 aa4.25□□□□□ -1.73
CNOT2-208ENST00000548021 H1FX-AS1Q4G0G2 97 aa4.25□□□□□ -1.73
CNOT2-208ENST00000548021 SPATA8Q6RVD6 105 aa4.25□□□□□ -1.73
CNOT2-208ENST00000548021 SEC61BP60468 96 aaKnown RBP4.24□□□□□ -1.73
CNOT2-208ENST00000548021 KRTAP4-1Q9BYQ7 146 aa4.24□□□□□ -1.73
CNOT2-208ENST00000548021 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
CNOT2-208ENST00000548021 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
CNOT2-208ENST00000548021 A6NN06 94 aa4.2□□□□□ -1.74
CNOT2-208ENST00000548021 H0YAA0 97 aa4.19□□□□□ -1.74
CNOT2-208ENST00000548021 KRTAP10-6P60371 365 aaPredicted RBP4.19□□□□□ -1.74
CNOT2-208ENST00000548021 A0A1B0GU33 70 aa4.18□□□□□ -1.74
CNOT2-208ENST00000548021 PCLOQ9Y6V0 5065 aa4.18□□□□□ -1.74
CNOT2-208ENST00000548021 PMAIP1Q13794 54 aa4.17□□□□□ -1.74
CNOT2-208ENST00000548021 KRTAP19-2Q3LHN2 52 aa4.16□□□□□ -1.74
CNOT2-208ENST00000548021 HERC1Q15751 4861 aa4.13□□□□□ -1.75
CNOT2-208ENST00000548021 P0C880 135 aa4.12□□□□□ -1.75
CNOT2-208ENST00000548021 CSAG1Q6PB30 78 aa4.12□□□□□ -1.75
CNOT2-208ENST00000548021 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
CNOT2-208ENST00000548021 ADM2Q7Z4H4 148 aa4.1□□□□□ -1.75
CNOT2-208ENST00000548021 HMCN2Q8NDA2 5059 aa4.1□□□□□ -1.75
CNOT2-208ENST00000548021 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
CNOT2-208ENST00000548021 FLGP20930 4061 aaPredicted RBP4.01□□□□□ -1.77
CNOT2-208ENST00000548021 A0A0D9SG42 100 aa4.01□□□□□ -1.77
CNOT2-208ENST00000548021 M0QZ58 72 aa3.97□□□□□ -1.77
CNOT2-208ENST00000548021 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
CNOT2-208ENST00000548021 K7ERS5 55 aa3.96□□□□□ -1.78
CNOT2-208ENST00000548021 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
CNOT2-208ENST00000548021 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
CNOT2-208ENST00000548021 R4GN34 69 aa3.91□□□□□ -1.78
CNOT2-208ENST00000548021 RNF213Q63HN8 5207 aa3.91□□□□□ -1.78
CNOT2-208ENST00000548021 ROMO1P60602 79 aa3.87□□□□□ -1.79
CNOT2-208ENST00000548021 SPINT4Q6UDR6 99 aa3.87□□□□□ -1.79
CNOT2-208ENST00000548021 MUC2Q02817 5179 aa3.86□□□□□ -1.79
CNOT2-208ENST00000548021 MT1HP80294 61 aa3.86□□□□□ -1.79
CNOT2-208ENST00000548021 LINC01554Q52M75 96 aa3.86□□□□□ -1.79
CNOT2-208ENST00000548021 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
CNOT2-208ENST00000548021 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
CNOT2-208ENST00000548021 CRIPTQ9P021 101 aa3.81□□□□□ -1.8
CNOT2-208ENST00000548021 M0R2T5 61 aa3.78□□□□□ -1.8
CNOT2-208ENST00000548021 MT2AP02795 61 aa3.77□□□□□ -1.81
CNOT2-208ENST00000548021 FAT4Q6V0I7 4981 aa3.77□□□□□ -1.81
CNOT2-208ENST00000548021 MT1FP04733 61 aa3.75□□□□□ -1.81
CNOT2-208ENST00000548021 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
CNOT2-208ENST00000548021 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
CNOT2-208ENST00000548021 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
CNOT2-208ENST00000548021 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
CNOT2-208ENST00000548021 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
CNOT2-208ENST00000548021 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
CNOT2-208ENST00000548021 MT1BP07438 61 aa3.6□□□□□ -1.83
CNOT2-208ENST00000548021 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
CNOT2-208ENST00000548021 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
CNOT2-208ENST00000548021 TNP1P09430 55 aa3.53□□□□□ -1.84
CNOT2-208ENST00000548021 MT1XP80297 61 aa3.51□□□□□ -1.85
CNOT2-208ENST00000548021 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
CNOT2-208ENST00000548021 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
CNOT2-208ENST00000548021 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
CNOT2-208ENST00000548021 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
CNOT2-208ENST00000548021 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
CNOT2-208ENST00000548021 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
CNOT2-208ENST00000548021 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
CNOT2-208ENST00000548021 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms