RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
CALCOCO1-208ENST00000547988 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
CALCOCO1-208ENST00000547988 DMAC1Q96GE9 116 aa5.35□□□□□ -1.55
CALCOCO1-208ENST00000547988 SNURFQ9Y675 71 aa5.34□□□□□ -1.55
CALCOCO1-208ENST00000547988 NDUFC1O43677 76 aa5.33□□□□□ -1.56
CALCOCO1-208ENST00000547988 C20orf197Q8N268 126 aa5.33□□□□□ -1.56
CALCOCO1-208ENST00000547988 KRTAP9-3Q9BYQ3 159 aa5.32□□□□□ -1.56
CALCOCO1-208ENST00000547988 COX7CP15954 63 aa5.29□□□□□ -1.56
CALCOCO1-208ENST00000547988 ACYP2P14621 99 aa5.27□□□□□ -1.57
CALCOCO1-208ENST00000547988 SPANXA2-OT1Q8N9U9 137 aa5.27□□□□□ -1.57
CALCOCO1-208ENST00000547988 H0YAA0 97 aa5.24□□□□□ -1.57
CALCOCO1-208ENST00000547988 LCE2BO14633 110 aa5.23□□□□□ -1.57
CALCOCO1-208ENST00000547988 ANAPC13Q9BS18 74 aa5.23□□□□□ -1.57
CALCOCO1-208ENST00000547988 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
CALCOCO1-208ENST00000547988 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
CALCOCO1-208ENST00000547988 SPTSSBQ8NFR3 76 aa5.18□□□□□ -1.58
CALCOCO1-208ENST00000547988 CRIPTQ9P021 101 aa5.17□□□□□ -1.58
CALCOCO1-208ENST00000547988 CHKB-CPT1BH3BT56 60 aa5.16□□□□□ -1.58
CALCOCO1-208ENST00000547988 H7BZZ5 65 aa5.16□□□□□ -1.58
CALCOCO1-208ENST00000547988 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
CALCOCO1-208ENST00000547988 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.59
CALCOCO1-208ENST00000547988 SPRR2GQ9BYE4 73 aa5.15□□□□□ -1.59
CALCOCO1-208ENST00000547988 CYSTM1Q9H1C7 97 aa5.15□□□□□ -1.59
CALCOCO1-208ENST00000547988 CCDC179H3BU77 68 aa5.09□□□□□ -1.59
CALCOCO1-208ENST00000547988 USH2AO75445 5202 aa5.09□□□□□ -1.6
CALCOCO1-208ENST00000547988 COA5Q86WW8 74 aa5.08□□□□□ -1.6
CALCOCO1-208ENST00000547988 KRTAP19-8Q3LI54 63 aa5.07□□□□□ -1.6
CALCOCO1-208ENST00000547988 P0C880 135 aa5.06□□□□□ -1.6
CALCOCO1-208ENST00000547988 Q5VV11 94 aa5.05□□□□□ -1.6
CALCOCO1-208ENST00000547988 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
CALCOCO1-208ENST00000547988 R4GN34 69 aa5.03□□□□□ -1.6
CALCOCO1-208ENST00000547988 MT1BP07438 61 aa5.02□□□□□ -1.61
CALCOCO1-208ENST00000547988 ATP5EP56381 51 aaPredicted RBP5.02□□□□□ -1.61
CALCOCO1-208ENST00000547988 SSPOA2VEC9 5147 aa5□□□□□ -1.61
CALCOCO1-208ENST00000547988 M0QZ58 72 aa4.98□□□□□ -1.61
CALCOCO1-208ENST00000547988 TMEM258P61165 79 aa4.96□□□□□ -1.62
CALCOCO1-208ENST00000547988 SEC61GP60059 68 aa4.93□□□□□ -1.62
CALCOCO1-208ENST00000547988 SERP1Q9Y6X1 66 aa4.91□□□□□ -1.62
CALCOCO1-208ENST00000547988 A6NN06 94 aa4.89□□□□□ -1.63
CALCOCO1-208ENST00000547988 LINC01554Q52M75 96 aa4.88□□□□□ -1.63
CALCOCO1-208ENST00000547988 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
CALCOCO1-208ENST00000547988 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
CALCOCO1-208ENST00000547988 FCGBPQ9Y6R7 5405 aaPredicted RBP4.87□□□□□ -1.63
CALCOCO1-208ENST00000547988 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
CALCOCO1-208ENST00000547988 A0A1B0GU69 56 aa4.83□□□□□ -1.64
CALCOCO1-208ENST00000547988 KRTAP13-4Q3LI77 160 aa4.82□□□□□ -1.64
CALCOCO1-208ENST00000547988 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
CALCOCO1-208ENST00000547988 A0A1B0GU33 70 aa4.8□□□□□ -1.64
CALCOCO1-208ENST00000547988 KRTAP9-7A8MTY7 169 aa4.79□□□□□ -1.64
CALCOCO1-208ENST00000547988 MT1XP80297 61 aa4.77□□□□□ -1.65
CALCOCO1-208ENST00000547988 PRR15LQ9BU68 103 aa4.77□□□□□ -1.65
CALCOCO1-208ENST00000547988 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
CALCOCO1-208ENST00000547988 PCP4P48539 62 aa4.75□□□□□ -1.65
CALCOCO1-208ENST00000547988 SPATA8Q6RVD6 105 aa4.74□□□□□ -1.65
CALCOCO1-208ENST00000547988 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
CALCOCO1-208ENST00000547988 A0A0D9SG42 100 aa4.69□□□□□ -1.66
CALCOCO1-208ENST00000547988 SMIM26A0A096LP01 95 aa4.68□□□□□ -1.66
CALCOCO1-208ENST00000547988 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.67
CALCOCO1-208ENST00000547988 V9GYY9 64 aa4.65□□□□□ -1.67
CALCOCO1-208ENST00000547988 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
CALCOCO1-208ENST00000547988 KRTAP12-1P59990 96 aa4.63□□□□□ -1.67
CALCOCO1-208ENST00000547988 KRTAP12-2P59991 146 aa4.63□□□□□ -1.67
CALCOCO1-208ENST00000547988 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
CALCOCO1-208ENST00000547988 Q1T7F1 81 aa4.62□□□□□ -1.67
CALCOCO1-208ENST00000547988 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
CALCOCO1-208ENST00000547988 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
CALCOCO1-208ENST00000547988 UQCR11O14957 56 aa4.61□□□□□ -1.67
CALCOCO1-208ENST00000547988 A8MU10 97 aa4.6□□□□□ -1.67
CALCOCO1-208ENST00000547988 RPS28P62857 69 aaKnown RBP4.59□□□□□ -1.67
CALCOCO1-208ENST00000547988 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
CALCOCO1-208ENST00000547988 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
CALCOCO1-208ENST00000547988 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
CALCOCO1-208ENST00000547988 PSPHP1O15172 72 aa4.54□□□□□ -1.68
CALCOCO1-208ENST00000547988 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
CALCOCO1-208ENST00000547988 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
CALCOCO1-208ENST00000547988 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
CALCOCO1-208ENST00000547988 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
CALCOCO1-208ENST00000547988 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
CALCOCO1-208ENST00000547988 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
CALCOCO1-208ENST00000547988 KMT2DO14686 5537 aa4.45□□□□□ -1.7
CALCOCO1-208ENST00000547988 A6NED7 52 aa4.43□□□□□ -1.7
CALCOCO1-208ENST00000547988 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
CALCOCO1-208ENST00000547988 K7ERS5 55 aa4.41□□□□□ -1.7
CALCOCO1-208ENST00000547988 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
CALCOCO1-208ENST00000547988 NEBP20929 6669 aa4.36□□□□□ -1.71
CALCOCO1-208ENST00000547988 TNP1P09430 55 aa4.36□□□□□ -1.71
CALCOCO1-208ENST00000547988 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
CALCOCO1-208ENST00000547988 SPRR2EP22531 72 aa4.3□□□□□ -1.72
CALCOCO1-208ENST00000547988 SPRR2BP35325 72 aa4.3□□□□□ -1.72
CALCOCO1-208ENST00000547988 SPRR2AP35326 72 aa4.3□□□□□ -1.72
CALCOCO1-208ENST00000547988 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
CALCOCO1-208ENST00000547988 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
CALCOCO1-208ENST00000547988 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
CALCOCO1-208ENST00000547988 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
CALCOCO1-208ENST00000547988 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
CALCOCO1-208ENST00000547988 MT1EP04732 61 aa4.21□□□□□ -1.74
CALCOCO1-208ENST00000547988 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
CALCOCO1-208ENST00000547988 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
CALCOCO1-208ENST00000547988 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
CALCOCO1-208ENST00000547988 SPRR2DP22532 72 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms