RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 KRTAP9-3Q9BYQ3 159 aa9.64□□□□□ -0.87
C12orf49-203ENST00000547630 FSIP2Q5CZC0 6907 aa9.58□□□□□ -0.88
C12orf49-203ENST00000547630 KRTAP9-6A0A140TA67 174 aa9.58□□□□□ -0.88
C12orf49-203ENST00000547630 CRCT1Q9UGL9 99 aa9.55□□□□□ -0.88
C12orf49-203ENST00000547630 NDUFC1O43677 76 aa9.53□□□□□ -0.88
C12orf49-203ENST00000547630 SERP2Q8N6R1 65 aa9.53□□□□□ -0.88
C12orf49-203ENST00000547630 LCE2BO14633 110 aa9.52□□□□□ -0.88
C12orf49-203ENST00000547630 SNURFQ9Y675 71 aa9.52□□□□□ -0.88
C12orf49-203ENST00000547630 DMAC1Q96GE9 116 aa9.51□□□□□ -0.89
C12orf49-203ENST00000547630 USH2AO75445 5202 aa9.48□□□□□ -0.89
C12orf49-203ENST00000547630 C20orf197Q8N268 126 aa9.47□□□□□ -0.89
C12orf49-203ENST00000547630 ACYP2P14621 99 aa9.37□□□□□ -0.91
C12orf49-203ENST00000547630 COX7CP15954 63 aa9.35□□□□□ -0.91
C12orf49-203ENST00000547630 H0YAA0 97 aa9.33□□□□□ -0.92
C12orf49-203ENST00000547630 KRTAP19-1Q8IUB9 90 aa9.32□□□□□ -0.92
C12orf49-203ENST00000547630 SSPOA2VEC9 5147 aa9.32□□□□□ -0.92
C12orf49-203ENST00000547630 SPANXA2-OT1Q8N9U9 137 aa9.3□□□□□ -0.92
C12orf49-203ENST00000547630 ADM2Q7Z4H4 148 aa9.27□□□□□ -0.93
C12orf49-203ENST00000547630 SPRR2GQ9BYE4 73 aa9.24□□□□□ -0.93
C12orf49-203ENST00000547630 ANAPC13Q9BS18 74 aa9.22□□□□□ -0.93
C12orf49-203ENST00000547630 CRIPTQ9P021 101 aa9.22□□□□□ -0.93
C12orf49-203ENST00000547630 CHKB-CPT1BH3BT56 60 aa9.21□□□□□ -0.94
C12orf49-203ENST00000547630 SPTSSBQ8NFR3 76 aa9.17□□□□□ -0.94
C12orf49-203ENST00000547630 CYSTM1Q9H1C7 97 aa9.15□□□□□ -0.94
C12orf49-203ENST00000547630 KRTAP19-8Q3LI54 63 aa9.13□□□□□ -0.95
C12orf49-203ENST00000547630 H7BZZ5 65 aa9.12□□□□□ -0.95
C12orf49-203ENST00000547630 P0C880 135 aa9.12□□□□□ -0.95
C12orf49-203ENST00000547630 KRTAP19-6Q3LI70 58 aa9.12□□□□□ -0.95
C12orf49-203ENST00000547630 Q5VV11 94 aa9.11□□□□□ -0.95
C12orf49-203ENST00000547630 MT1BP07438 61 aa9.1□□□□□ -0.95
C12orf49-203ENST00000547630 FCGBPQ9Y6R7 5405 aaPredicted RBP9.06□□□□□ -0.96
C12orf49-203ENST00000547630 COA5Q86WW8 74 aa9.05□□□□□ -0.96
C12orf49-203ENST00000547630 CCDC179H3BU77 68 aa9.03□□□□□ -0.96
C12orf49-203ENST00000547630 R4GN34 69 aa9□□□□□ -0.97
C12orf49-203ENST00000547630 M0QZ58 72 aa8.96□□□□□ -0.98
C12orf49-203ENST00000547630 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.87□□□□□ -0.99
C12orf49-203ENST00000547630 A6NN06 94 aa8.86□□□□□ -0.99
C12orf49-203ENST00000547630 LINC01554Q52M75 96 aa8.83□□□□□ -1
C12orf49-203ENST00000547630 KRTAP10-5P60370 271 aa8.81□□□□□ -1
C12orf49-203ENST00000547630 PLAC4Q8WY50 150 aa8.78□□□□□ -1
C12orf49-203ENST00000547630 ATP5EP56381 51 aaPredicted RBP8.77□□□□□ -1.01
C12orf49-203ENST00000547630 SEC61GP60059 68 aa8.74□□□□□ -1.01
C12orf49-203ENST00000547630 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
C12orf49-203ENST00000547630 MACF1Q9UPN3 7388 aaKnown RBP8.7□□□□□ -1.02
C12orf49-203ENST00000547630 TMEM258P61165 79 aa8.68□□□□□ -1.02
C12orf49-203ENST00000547630 KRTAP13-4Q3LI77 160 aa8.67□□□□□ -1.02
C12orf49-203ENST00000547630 KRTAP9-7A8MTY7 169 aa8.66□□□□□ -1.02
C12orf49-203ENST00000547630 MT1XP80297 61 aa8.61□□□□□ -1.03
C12orf49-203ENST00000547630 PRO2289Q9P1D8 64 aa8.61□□□□□ -1.03
C12orf49-203ENST00000547630 SYNE2Q8WXH0 6885 aaKnown RBP8.57□□□□□ -1.04
C12orf49-203ENST00000547630 A0A1B0GU69 56 aa8.57□□□□□ -1.04
C12orf49-203ENST00000547630 A0A1B0GU33 70 aa8.56□□□□□ -1.04
C12orf49-203ENST00000547630 SPATA8Q6RVD6 105 aa8.51□□□□□ -1.05
C12orf49-203ENST00000547630 A0A0D9SG42 100 aa8.46□□□□□ -1.06
C12orf49-203ENST00000547630 LINC01558Q9Y6Z2 57 aa8.43□□□□□ -1.06
C12orf49-203ENST00000547630 KRTAP6-3Q3LI67 103 aa8.42□□□□□ -1.06
C12orf49-203ENST00000547630 PRR15LQ9BU68 103 aa8.41□□□□□ -1.06
C12orf49-203ENST00000547630 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
C12orf49-203ENST00000547630 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
C12orf49-203ENST00000547630 SMIM26A0A096LP01 95 aa8.31□□□□□ -1.08
C12orf49-203ENST00000547630 PCP4P48539 62 aa8.31□□□□□ -1.08
C12orf49-203ENST00000547630 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
C12orf49-203ENST00000547630 KRTAP12-1P59990 96 aa8.28□□□□□ -1.08
C12orf49-203ENST00000547630 A8MU10 97 aa8.27□□□□□ -1.09
C12orf49-203ENST00000547630 KMT2DO14686 5537 aa8.26□□□□□ -1.09
C12orf49-203ENST00000547630 KRTAP10-7P60409 375 aaPredicted RBP8.24□□□□□ -1.09
C12orf49-203ENST00000547630 KRTAP10-12P60413 245 aa8.18□□□□□ -1.1
C12orf49-203ENST00000547630 KRTAP5-9P26371 169 aa8.17□□□□□ -1.1
C12orf49-203ENST00000547630 KRTAP4-8A0A0G2JLE6 195 aa8.14□□□□□ -1.11
C12orf49-203ENST00000547630 UQCR11O14957 56 aa8.14□□□□□ -1.11
C12orf49-203ENST00000547630 KRTAP8-1Q8IUC2 63 aa8.14□□□□□ -1.11
C12orf49-203ENST00000547630 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
C12orf49-203ENST00000547630 V9GYY9 64 aa8.14□□□□□ -1.11
C12orf49-203ENST00000547630 Q1T7F1 81 aa8.11□□□□□ -1.11
C12orf49-203ENST00000547630 MUC12Q9UKN1 5478 aa8.09□□□□□ -1.11
C12orf49-203ENST00000547630 PSPHP1O15172 72 aa8.08□□□□□ -1.12
C12orf49-203ENST00000547630 SPRR2FQ96RM1 72 aa8.05□□□□□ -1.12
C12orf49-203ENST00000547630 RPS28P62857 69 aaKnown RBP8.01□□□□□ -1.13
C12orf49-203ENST00000547630 MIR22HGQ0VDD5 57 aa8□□□□□ -1.13
C12orf49-203ENST00000547630 NEBP20929 6669 aa7.99□□□□□ -1.13
C12orf49-203ENST00000547630 MDN1Q9NU22 5596 aa7.93□□□□□ -1.14
C12orf49-203ENST00000547630 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
C12orf49-203ENST00000547630 SPRR2EP22531 72 aa7.85□□□□□ -1.15
C12orf49-203ENST00000547630 SPRR2BP35325 72 aa7.85□□□□□ -1.15
C12orf49-203ENST00000547630 SPRR2AP35326 72 aa7.85□□□□□ -1.15
C12orf49-203ENST00000547630 A6NED7 52 aa7.81□□□□□ -1.16
C12orf49-203ENST00000547630 H3BS24 57 aa7.81□□□□□ -1.16
C12orf49-203ENST00000547630 TNP1P09430 55 aa7.78□□□□□ -1.16
C12orf49-203ENST00000547630 LCE1AQ5T7P2 110 aa7.78□□□□□ -1.16
C12orf49-203ENST00000547630 K7ERS5 55 aa7.77□□□□□ -1.17
C12orf49-203ENST00000547630 KRTAP19-7Q3SYF9 63 aa7.7□□□□□ -1.18
C12orf49-203ENST00000547630 KRTAP20-1Q3LI63 56 aa7.63□□□□□ -1.19
C12orf49-203ENST00000547630 LCE3AQ5TA76 89 aa7.63□□□□□ -1.19
C12orf49-203ENST00000547630 MT1EP04732 61 aa7.61□□□□□ -1.19
C12orf49-203ENST00000547630 KRTAP19-5Q3LI72 72 aa7.61□□□□□ -1.19
C12orf49-203ENST00000547630 SPRR2DP22532 72 aa7.58□□□□□ -1.2
C12orf49-203ENST00000547630 KRTAP2-3P0C7H8 128 aa7.53□□□□□ -1.2
C12orf49-203ENST00000547630 KRTAP2-4Q9BYR9 128 aa7.53□□□□□ -1.2
C12orf49-203ENST00000547630 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
C12orf49-203ENST00000547630 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms