RNA–Protein interactions for RNA: ENST00000547605.5

RBFOX1-210, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-210ENST00000547605 KRTAP3-1Q9BYR8 98 aa11.1□□□□□ -0.63
RBFOX1-210ENST00000547605 LINC01558Q9Y6Z2 57 aa11.09□□□□□ -0.63
RBFOX1-210ENST00000547605 RNF213Q63HN8 5207 aa11.08□□□□□ -0.64
RBFOX1-210ENST00000547605 PSPHP1O15172 72 aa11.02□□□□□ -0.64
RBFOX1-210ENST00000547605 H1FX-AS1Q4G0G2 97 aa11□□□□□ -0.65
RBFOX1-210ENST00000547605 SPTSSBQ8NFR3 76 aa11□□□□□ -0.65
RBFOX1-210ENST00000547605 PRR15LQ9BU68 103 aa11□□□□□ -0.65
RBFOX1-210ENST00000547605 KRTAP19-2Q3LHN2 52 aa10.96□□□□□ -0.65
RBFOX1-210ENST00000547605 Q5VV11 94 aa10.95□□□□□ -0.66
RBFOX1-210ENST00000547605 S4R3F8 94 aa10.88□□□□□ -0.67
RBFOX1-210ENST00000547605 LCE2CQ5TA81 110 aa10.84□□□□□ -0.67
RBFOX1-210ENST00000547605 BRK1Q8WUW1 75 aa10.84□□□□□ -0.67
RBFOX1-210ENST00000547605 A0A1B0GU69 56 aa10.83□□□□□ -0.68
RBFOX1-210ENST00000547605 LCA10Q71F78 164 aa10.83□□□□□ -0.68
RBFOX1-210ENST00000547605 PRO0628Q9UI54 55 aa10.81□□□□□ -0.68
RBFOX1-210ENST00000547605 SEC61GP60059 68 aa10.76□□□□□ -0.69
RBFOX1-210ENST00000547605 A6NED7 52 aa10.75□□□□□ -0.69
RBFOX1-210ENST00000547605 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
RBFOX1-210ENST00000547605 FAT4Q6V0I7 4981 aa10.71□□□□□ -0.69
RBFOX1-210ENST00000547605 FLGP20930 4061 aaPredicted RBP10.67□□□□□ -0.7
RBFOX1-210ENST00000547605 MT1HP80294 61 aa10.67□□□□□ -0.7
RBFOX1-210ENST00000547605 CSAG1Q6PB30 78 aa10.67□□□□□ -0.7
RBFOX1-210ENST00000547605 M0R2T5 61 aa10.65□□□□□ -0.71
RBFOX1-210ENST00000547605 CDC42SE1Q9NRR8 79 aa10.63□□□□□ -0.71
RBFOX1-210ENST00000547605 UQCR11O14957 56 aa10.59□□□□□ -0.71
RBFOX1-210ENST00000547605 SPATA8Q6RVD6 105 aa10.47□□□□□ -0.73
RBFOX1-210ENST00000547605 MIR22HGQ0VDD5 57 aa10.46□□□□□ -0.74
RBFOX1-210ENST00000547605 A0A1B0GU33 70 aa10.4□□□□□ -0.74
RBFOX1-210ENST00000547605 LCE2AQ5TA79 106 aaPredicted RBP10.4□□□□□ -0.74
RBFOX1-210ENST00000547605 A8MU10 97 aa10.4□□□□□ -0.75
RBFOX1-210ENST00000547605 ADM2Q7Z4H4 148 aa10.37□□□□□ -0.75
RBFOX1-210ENST00000547605 H0YAA0 97 aa10.34□□□□□ -0.75
RBFOX1-210ENST00000547605 KRTAP10-6P60371 365 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-210ENST00000547605 PMAIP1Q13794 54 aa10.29□□□□□ -0.76
RBFOX1-210ENST00000547605 KRTAP3-2Q9BYR7 98 aa10.27□□□□□ -0.77
RBFOX1-210ENST00000547605 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
RBFOX1-210ENST00000547605 P0C880 135 aa10.24□□□□□ -0.77
RBFOX1-210ENST00000547605 KRTAP9-8Q9BYQ0 159 aa10.23□□□□□ -0.77
RBFOX1-210ENST00000547605 MT2AP02795 61 aa10.19□□□□□ -0.78
RBFOX1-210ENST00000547605 KRTAP10-10P60014 251 aa10.15□□□□□ -0.78
RBFOX1-210ENST00000547605 A6NN06 94 aa10.14□□□□□ -0.79
RBFOX1-210ENST00000547605 MT1FP04733 61 aa10.12□□□□□ -0.79
RBFOX1-210ENST00000547605 K7ERS5 55 aa10.04□□□□□ -0.8
RBFOX1-210ENST00000547605 R4GN34 69 aa10.03□□□□□ -0.8
RBFOX1-210ENST00000547605 M0QZ58 72 aa10.02□□□□□ -0.81
RBFOX1-210ENST00000547605 CRIPTQ9P021 101 aa10.01□□□□□ -0.81
RBFOX1-210ENST00000547605 KTN1-AS1Q86SY8 53 aa9.96□□□□□ -0.81
RBFOX1-210ENST00000547605 KRTAP13-4Q3LI77 160 aa9.95□□□□□ -0.82
RBFOX1-210ENST00000547605 KRTAP9-3Q9BYQ3 159 aa9.86□□□□□ -0.83
RBFOX1-210ENST00000547605 LINC01554Q52M75 96 aa9.86□□□□□ -0.83
RBFOX1-210ENST00000547605 A0A0D9SG42 100 aa9.84□□□□□ -0.83
RBFOX1-210ENST00000547605 KRTAP19-1Q8IUB9 90 aa9.84□□□□□ -0.83
RBFOX1-210ENST00000547605 SPRR2GQ9BYE4 73 aa9.84□□□□□ -0.83
RBFOX1-210ENST00000547605 KRTAP12-1P59990 96 aa9.66□□□□□ -0.86
RBFOX1-210ENST00000547605 LCE2BO14633 110 aa9.64□□□□□ -0.87
RBFOX1-210ENST00000547605 SPINT4Q6UDR6 99 aa9.63□□□□□ -0.87
RBFOX1-210ENST00000547605 KRTAP12-2P59991 146 aa9.62□□□□□ -0.87
RBFOX1-210ENST00000547605 KRTAP19-8Q3LI54 63 aa9.61□□□□□ -0.87
RBFOX1-210ENST00000547605 ROMO1P60602 79 aa9.58□□□□□ -0.88
RBFOX1-210ENST00000547605 LCE2DQ5TA82 110 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-210ENST00000547605 PLAC4Q8WY50 150 aa9.54□□□□□ -0.88
RBFOX1-210ENST00000547605 MT1BP07438 61 aa9.52□□□□□ -0.89
RBFOX1-210ENST00000547605 PRAC1Q96KF2 57 aa9.48□□□□□ -0.89
RBFOX1-210ENST00000547605 CAMK2N1Q7Z7J9 78 aa9.38□□□□□ -0.91
RBFOX1-210ENST00000547605 USH2AO75445 5202 aa9.37□□□□□ -0.91
RBFOX1-210ENST00000547605 KRTAP9-2Q9BYQ4 174 aa9.35□□□□□ -0.91
RBFOX1-210ENST00000547605 KRTAP25-1Q3LHN0 102 aa9.31□□□□□ -0.92
RBFOX1-210ENST00000547605 FSIP2Q5CZC0 6907 aa9.21□□□□□ -0.94
RBFOX1-210ENST00000547605 MT1XP80297 61 aa9.15□□□□□ -0.94
RBFOX1-210ENST00000547605 PRO2289Q9P1D8 64 aa9.15□□□□□ -0.95
RBFOX1-210ENST00000547605 KRTAP10-5P60370 271 aa9.13□□□□□ -0.95
RBFOX1-210ENST00000547605 SSPOA2VEC9 5147 aa9.12□□□□□ -0.95
RBFOX1-210ENST00000547605 KRTAP19-6Q3LI70 58 aa9.1□□□□□ -0.95
RBFOX1-210ENST00000547605 C10orf95Q9H7T3 257 aa9.1□□□□□ -0.95
RBFOX1-210ENST00000547605 CRCT1Q9UGL9 99 aa8.99□□□□□ -0.97
RBFOX1-210ENST00000547605 TNP1P09430 55 aa8.87□□□□□ -0.99
RBFOX1-210ENST00000547605 PP632Q6XCG6 107 aa8.86□□□□□ -0.99
RBFOX1-210ENST00000547605 KRTAP10-7P60409 375 aaPredicted RBP8.79□□□□□ -1
RBFOX1-210ENST00000547605 FCGBPQ9Y6R7 5405 aaPredicted RBP8.79□□□□□ -1
RBFOX1-210ENST00000547605 KRTAP23-1A1A580 65 aa8.78□□□□□ -1
RBFOX1-210ENST00000547605 KRTAP9-6A0A140TA67 174 aa8.72□□□□□ -1.01
RBFOX1-210ENST00000547605 KRTAP10-12P60413 245 aa8.68□□□□□ -1.02
RBFOX1-210ENST00000547605 KRTAP4-8A0A0G2JLE6 195 aa8.52□□□□□ -1.04
RBFOX1-210ENST00000547605 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.04
RBFOX1-210ENST00000547605 LCE3AQ5TA76 89 aa8.51□□□□□ -1.05
RBFOX1-210ENST00000547605 KMT2DO14686 5537 aa8.47□□□□□ -1.05
RBFOX1-210ENST00000547605 KRTAP8-1Q8IUC2 63 aa8.38□□□□□ -1.07
RBFOX1-210ENST00000547605 MACF1Q9UPN3 7388 aaKnown RBP8.36□□□□□ -1.07
RBFOX1-210ENST00000547605 H3BS24 57 aa8.33□□□□□ -1.08
RBFOX1-210ENST00000547605 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.31□□□□□ -1.08
RBFOX1-210ENST00000547605 KRTAP15-1Q3LI76 137 aa8.28□□□□□ -1.08
RBFOX1-210ENST00000547605 KRTAP19-5Q3LI72 72 aa8.24□□□□□ -1.09
RBFOX1-210ENST00000547605 KRTAP12-3P60328 96 aa8.18□□□□□ -1.1
RBFOX1-210ENST00000547605 KRTAP19-7Q3SYF9 63 aa8.16□□□□□ -1.1
RBFOX1-210ENST00000547605 SYNE2Q8WXH0 6885 aaKnown RBP8.16□□□□□ -1.1
RBFOX1-210ENST00000547605 SPRR2FQ96RM1 72 aa8.13□□□□□ -1.11
RBFOX1-210ENST00000547605 MT1EP04732 61 aa8.04□□□□□ -1.12
RBFOX1-210ENST00000547605 KRTAP5-9P26371 169 aa8.04□□□□□ -1.12
RBFOX1-210ENST00000547605 KRTAP6-3Q3LI67 103 aa8.04□□□□□ -1.12
RBFOX1-210ENST00000547605 KRTAP9-7A8MTY7 169 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms