RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 PRR15LQ9BU68 103 aa9.25□□□□□ -0.93
RBFOX1-207ENST00000547338 KRTAP3-3Q9BYR6 98 aa9.21□□□□□ -0.93
RBFOX1-207ENST00000547338 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.93
RBFOX1-207ENST00000547338 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.94
RBFOX1-207ENST00000547338 C9orf92A6NGG3 77 aa9.2□□□□□ -0.94
RBFOX1-207ENST00000547338 SEC61BP60468 96 aaKnown RBP9.15□□□□□ -0.95
RBFOX1-207ENST00000547338 SPTSSBQ8NFR3 76 aa9.11□□□□□ -0.95
RBFOX1-207ENST00000547338 A6NED7 52 aa9.08□□□□□ -0.96
RBFOX1-207ENST00000547338 SPINK7P58062 85 aa9.07□□□□□ -0.96
RBFOX1-207ENST00000547338 ATP11AUNQ6ZP68 121 aa9.06□□□□□ -0.96
RBFOX1-207ENST00000547338 CDC42SE1Q9NRR8 79 aa9.04□□□□□ -0.96
RBFOX1-207ENST00000547338 A0A1B0GU69 56 aa9.03□□□□□ -0.96
RBFOX1-207ENST00000547338 KRTAP19-2Q3LHN2 52 aa9.02□□□□□ -0.97
RBFOX1-207ENST00000547338 RPL37P61927 97 aaKnown RBP9.01□□□□□ -0.97
RBFOX1-207ENST00000547338 LCE2CQ5TA81 110 aa9□□□□□ -0.97
RBFOX1-207ENST00000547338 COX6B2Q6YFQ2 88 aa8.97□□□□□ -0.97
RBFOX1-207ENST00000547338 LCA10Q71F78 164 aa8.95□□□□□ -0.98
RBFOX1-207ENST00000547338 SEC61GP60059 68 aa8.94□□□□□ -0.98
RBFOX1-207ENST00000547338 KRTAP3-1Q9BYR8 98 aa8.9□□□□□ -0.98
RBFOX1-207ENST00000547338 UQCR11O14957 56 aa8.89□□□□□ -0.99
RBFOX1-207ENST00000547338 KRTAP9-2Q9BYQ4 174 aa8.86□□□□□ -0.99
RBFOX1-207ENST00000547338 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
RBFOX1-207ENST00000547338 MT1HP80294 61 aa8.83□□□□□ -1
RBFOX1-207ENST00000547338 PMAIP1Q13794 54 aa8.83□□□□□ -1
RBFOX1-207ENST00000547338 A8MU10 97 aa8.79□□□□□ -1
RBFOX1-207ENST00000547338 MIR22HGQ0VDD5 57 aa8.78□□□□□ -1
RBFOX1-207ENST00000547338 FLGP20930 4061 aaPredicted RBP8.76□□□□□ -1.01
RBFOX1-207ENST00000547338 A6NN06 94 aa8.7□□□□□ -1.02
RBFOX1-207ENST00000547338 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
RBFOX1-207ENST00000547338 A0A1B0GU33 70 aa8.64□□□□□ -1.03
RBFOX1-207ENST00000547338 KRTAP10-6P60371 365 aaPredicted RBP8.64□□□□□ -1.03
RBFOX1-207ENST00000547338 H1FX-AS1Q4G0G2 97 aa8.63□□□□□ -1.03
RBFOX1-207ENST00000547338 S4R3F8 94 aa8.63□□□□□ -1.03
RBFOX1-207ENST00000547338 KTN1-AS1Q86SY8 53 aa8.6□□□□□ -1.03
RBFOX1-207ENST00000547338 RBM12B-AS1Q9P1G2 102 aa8.6□□□□□ -1.03
RBFOX1-207ENST00000547338 M0R2T5 61 aa8.54□□□□□ -1.04
RBFOX1-207ENST00000547338 KRTAP9-6A0A140TA67 174 aa8.52□□□□□ -1.05
RBFOX1-207ENST00000547338 H0YAA0 97 aa8.48□□□□□ -1.05
RBFOX1-207ENST00000547338 CSAG1Q6PB30 78 aa8.44□□□□□ -1.06
RBFOX1-207ENST00000547338 K7ERS5 55 aa8.4□□□□□ -1.06
RBFOX1-207ENST00000547338 KRTAP9-8Q9BYQ0 159 aa8.39□□□□□ -1.07
RBFOX1-207ENST00000547338 FSIP2Q5CZC0 6907 aa8.38□□□□□ -1.07
RBFOX1-207ENST00000547338 CRCT1Q9UGL9 99 aa8.37□□□□□ -1.07
RBFOX1-207ENST00000547338 MT2AP02795 61 aa8.27□□□□□ -1.09
RBFOX1-207ENST00000547338 ADM2Q7Z4H4 148 aa8.27□□□□□ -1.09
RBFOX1-207ENST00000547338 M0QZ58 72 aa8.24□□□□□ -1.09
RBFOX1-207ENST00000547338 P0C880 135 aa8.22□□□□□ -1.09
RBFOX1-207ENST00000547338 MT1FP04733 61 aa8.21□□□□□ -1.1
RBFOX1-207ENST00000547338 USH2AO75445 5202 aa8.2□□□□□ -1.1
RBFOX1-207ENST00000547338 KRTAP13-4Q3LI77 160 aa8.17□□□□□ -1.1
RBFOX1-207ENST00000547338 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
RBFOX1-207ENST00000547338 SSPOA2VEC9 5147 aa8.1□□□□□ -1.11
RBFOX1-207ENST00000547338 LCE2BO14633 110 aa8.08□□□□□ -1.12
RBFOX1-207ENST00000547338 KRTAP10-10P60014 251 aa8.08□□□□□ -1.12
RBFOX1-207ENST00000547338 PRAC1Q96KF2 57 aa8.08□□□□□ -1.12
RBFOX1-207ENST00000547338 A0A0D9SG42 100 aa8.07□□□□□ -1.12
RBFOX1-207ENST00000547338 ROMO1P60602 79 aa8.05□□□□□ -1.12
RBFOX1-207ENST00000547338 R4GN34 69 aa7.98□□□□□ -1.13
RBFOX1-207ENST00000547338 KRTAP12-1P59990 96 aa7.97□□□□□ -1.13
RBFOX1-207ENST00000547338 KRTAP25-1Q3LHN0 102 aa7.93□□□□□ -1.14
RBFOX1-207ENST00000547338 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
RBFOX1-207ENST00000547338 LINC01554Q52M75 96 aa7.9□□□□□ -1.14
RBFOX1-207ENST00000547338 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.14
RBFOX1-207ENST00000547338 FCGBPQ9Y6R7 5405 aaPredicted RBP7.89□□□□□ -1.15
RBFOX1-207ENST00000547338 KRTAP19-1Q8IUB9 90 aa7.88□□□□□ -1.15
RBFOX1-207ENST00000547338 CRIPTQ9P021 101 aa7.88□□□□□ -1.15
RBFOX1-207ENST00000547338 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.82□□□□□ -1.16
RBFOX1-207ENST00000547338 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
RBFOX1-207ENST00000547338 KRTAP9-7A8MTY7 169 aa7.67□□□□□ -1.18
RBFOX1-207ENST00000547338 SPRR2GQ9BYE4 73 aa7.57□□□□□ -1.2
RBFOX1-207ENST00000547338 MT1BP07438 61 aa7.57□□□□□ -1.2
RBFOX1-207ENST00000547338 KRTAP19-8Q3LI54 63 aa7.53□□□□□ -1.2
RBFOX1-207ENST00000547338 MACF1Q9UPN3 7388 aaKnown RBP7.52□□□□□ -1.21
RBFOX1-207ENST00000547338 CAMK2N1Q7Z7J9 78 aa7.52□□□□□ -1.21
RBFOX1-207ENST00000547338 C10orf95Q9H7T3 257 aa7.49□□□□□ -1.21
RBFOX1-207ENST00000547338 PP632Q6XCG6 107 aa7.41□□□□□ -1.22
RBFOX1-207ENST00000547338 SYNE2Q8WXH0 6885 aaKnown RBP7.4□□□□□ -1.22
RBFOX1-207ENST00000547338 H3BS24 57 aa7.37□□□□□ -1.23
RBFOX1-207ENST00000547338 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
RBFOX1-207ENST00000547338 KRTAP10-5P60370 271 aa7.34□□□□□ -1.23
RBFOX1-207ENST00000547338 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
RBFOX1-207ENST00000547338 KRTAP6-3Q3LI67 103 aa7.3□□□□□ -1.24
RBFOX1-207ENST00000547338 TNP1P09430 55 aa7.29□□□□□ -1.24
RBFOX1-207ENST00000547338 KRTAP15-1Q3LI76 137 aa7.12□□□□□ -1.27
RBFOX1-207ENST00000547338 MT1XP80297 61 aa7.11□□□□□ -1.27
RBFOX1-207ENST00000547338 KRTAP5-9P26371 169 aa7.03□□□□□ -1.28
RBFOX1-207ENST00000547338 MUC12Q9UKN1 5478 aa7.03□□□□□ -1.28
RBFOX1-207ENST00000547338 NEBP20929 6669 aa6.99□□□□□ -1.29
RBFOX1-207ENST00000547338 KMT2DO14686 5537 aa6.98□□□□□ -1.29
RBFOX1-207ENST00000547338 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.3
RBFOX1-207ENST00000547338 MDN1Q9NU22 5596 aa6.88□□□□□ -1.31
RBFOX1-207ENST00000547338 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
RBFOX1-207ENST00000547338 KRTAP10-7P60409 375 aaPredicted RBP6.78□□□□□ -1.32
RBFOX1-207ENST00000547338 SPRR2FQ96RM1 72 aa6.78□□□□□ -1.32
RBFOX1-207ENST00000547338 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
RBFOX1-207ENST00000547338 LCE3AQ5TA76 89 aa6.77□□□□□ -1.33
RBFOX1-207ENST00000547338 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
RBFOX1-207ENST00000547338 KRTAP10-12P60413 245 aa6.72□□□□□ -1.33
RBFOX1-207ENST00000547338 NDUFAF8A1L188 74 aa6.71□□□□□ -1.34
RBFOX1-207ENST00000547338 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms