RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 C5orf47Q569G3 176 aa6.88□□□□□ -1.31
CCDC38-205ENST00000546947 LINC00643Q86TS7 51 aa6.86□□□□□ -1.31
CCDC38-205ENST00000546947 A0A1B0GV90 55 aa6.85□□□□□ -1.31
CCDC38-205ENST00000546947 UQCRQO14949 82 aa6.85□□□□□ -1.31
CCDC38-205ENST00000546947 LCA10Q71F78 164 aa6.85□□□□□ -1.31
CCDC38-205ENST00000546947 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
CCDC38-205ENST00000546947 CSAG1Q6PB30 78 aa6.84□□□□□ -1.31
CCDC38-205ENST00000546947 ATOX1O00244 68 aa6.82□□□□□ -1.32
CCDC38-205ENST00000546947 A0A087WVE0 104 aa6.81□□□□□ -1.32
CCDC38-205ENST00000546947 KRTAP19-6Q3LI70 58 aa6.81□□□□□ -1.32
CCDC38-205ENST00000546947 H0Y9P7 68 aa6.8□□□□□ -1.32
CCDC38-205ENST00000546947 FAM236AA0A1B0GUQ0 79 aa6.79□□□□□ -1.32
CCDC38-205ENST00000546947 FAM236BA0A1B0GV22 79 aa6.79□□□□□ -1.32
CCDC38-205ENST00000546947 J3QR89 54 aa6.74□□□□□ -1.33
CCDC38-205ENST00000546947 LINC00208Q96KT6 92 aa6.69□□□□□ -1.34
CCDC38-205ENST00000546947 OCR1Q9BZK8 76 aa6.69□□□□□ -1.34
CCDC38-205ENST00000546947 MACF1Q9UPN3 7388 aaKnown RBP6.68□□□□□ -1.34
CCDC38-205ENST00000546947 MP68P56378 58 aa6.68□□□□□ -1.34
CCDC38-205ENST00000546947 KLKP1Q107X0 134 aa6.68□□□□□ -1.34
CCDC38-205ENST00000546947 LCE5AQ5TCM9 118 aa6.68□□□□□ -1.34
CCDC38-205ENST00000546947 A8MUN3 132 aa6.67□□□□□ -1.34
CCDC38-205ENST00000546947 SPRR2GQ9BYE4 73 aa6.67□□□□□ -1.34
CCDC38-205ENST00000546947 NDUFC1O43677 76 aa6.65□□□□□ -1.34
CCDC38-205ENST00000546947 KRTAP4-2Q9BYR5 136 aa6.65□□□□□ -1.34
CCDC38-205ENST00000546947 KRTAP4-11Q9BYQ6 195 aa6.64□□□□□ -1.35
CCDC38-205ENST00000546947 IMUPQ9GZP8 106 aa6.64□□□□□ -1.35
CCDC38-205ENST00000546947 Q5VV11 94 aa6.63□□□□□ -1.35
CCDC38-205ENST00000546947 H3BPC8 53 aa6.62□□□□□ -1.35
CCDC38-205ENST00000546947 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
CCDC38-205ENST00000546947 MT1BP07438 61 aa6.6□□□□□ -1.35
CCDC38-205ENST00000546947 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
CCDC38-205ENST00000546947 H0YAA0 97 aa6.59□□□□□ -1.35
CCDC38-205ENST00000546947 SCGB1A1P11684 91 aa6.58□□□□□ -1.36
CCDC38-205ENST00000546947 SYNE2Q8WXH0 6885 aaKnown RBP6.56□□□□□ -1.36
CCDC38-205ENST00000546947 A6NN06 94 aa6.52□□□□□ -1.37
CCDC38-205ENST00000546947 K7ERU9 68 aa6.49□□□□□ -1.37
CCDC38-205ENST00000546947 ADM2Q7Z4H4 148 aa6.48□□□□□ -1.37
CCDC38-205ENST00000546947 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
CCDC38-205ENST00000546947 MT-ATP8P03928 68 aa6.46□□□□□ -1.38
CCDC38-205ENST00000546947 KRTAP10-5P60370 271 aa6.46□□□□□ -1.38
CCDC38-205ENST00000546947 SMIM20Q8N5G0 67 aa6.44□□□□□ -1.38
CCDC38-205ENST00000546947 KRTAP6-3Q3LI67 103 aa6.43□□□□□ -1.38
CCDC38-205ENST00000546947 TRAV7A0A075B6U4 112 aa6.42□□□□□ -1.38
CCDC38-205ENST00000546947 C20orf197Q8N268 126 aa6.37□□□□□ -1.39
CCDC38-205ENST00000546947 ACYP2P14621 99 aa6.35□□□□□ -1.39
CCDC38-205ENST00000546947 P0C880 135 aa6.34□□□□□ -1.39
CCDC38-205ENST00000546947 R4GN34 69 aa6.34□□□□□ -1.39
CCDC38-205ENST00000546947 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
CCDC38-205ENST00000546947 M0QZ58 72 aa6.28□□□□□ -1.4
CCDC38-205ENST00000546947 SPTSSBQ8NFR3 76 aa6.28□□□□□ -1.4
CCDC38-205ENST00000546947 PLAC4Q8WY50 150 aa6.27□□□□□ -1.41
CCDC38-205ENST00000546947 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
CCDC38-205ENST00000546947 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
CCDC38-205ENST00000546947 SNURFQ9Y675 71 aa6.25□□□□□ -1.41
CCDC38-205ENST00000546947 CHKB-CPT1BH3BT56 60 aa6.22□□□□□ -1.41
CCDC38-205ENST00000546947 SERP2Q8N6R1 65 aa6.21□□□□□ -1.42
CCDC38-205ENST00000546947 MT1XP80297 61 aa6.2□□□□□ -1.42
CCDC38-205ENST00000546947 SPANXA2-OT1Q8N9U9 137 aa6.2□□□□□ -1.42
CCDC38-205ENST00000546947 KRTAP5-9P26371 169 aa6.17□□□□□ -1.42
CCDC38-205ENST00000546947 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
CCDC38-205ENST00000546947 NEBP20929 6669 aa6.16□□□□□ -1.42
CCDC38-205ENST00000546947 KMT2DO14686 5537 aa6.13□□□□□ -1.43
CCDC38-205ENST00000546947 MDN1Q9NU22 5596 aa6.1□□□□□ -1.43
CCDC38-205ENST00000546947 KRTAP12-2P59991 146 aa6.08□□□□□ -1.44
CCDC38-205ENST00000546947 COX7CP15954 63 aa6.04□□□□□ -1.44
CCDC38-205ENST00000546947 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.45
CCDC38-205ENST00000546947 COA5Q86WW8 74 aa6.01□□□□□ -1.45
CCDC38-205ENST00000546947 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
CCDC38-205ENST00000546947 SPRR2FQ96RM1 72 aa5.98□□□□□ -1.45
CCDC38-205ENST00000546947 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
CCDC38-205ENST00000546947 H7BZZ5 65 aa5.92□□□□□ -1.46
CCDC38-205ENST00000546947 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
CCDC38-205ENST00000546947 KRTAP20-1Q3LI63 56 aa5.92□□□□□ -1.46
CCDC38-205ENST00000546947 SEC61GP60059 68 aa5.91□□□□□ -1.46
CCDC38-205ENST00000546947 KRTAP10-12P60413 245 aa5.9□□□□□ -1.46
CCDC38-205ENST00000546947 SERP1Q9Y6X1 66 aa5.9□□□□□ -1.46
CCDC38-205ENST00000546947 SPRR2EP22531 72 aa5.89□□□□□ -1.47
CCDC38-205ENST00000546947 SPRR2BP35325 72 aa5.89□□□□□ -1.47
CCDC38-205ENST00000546947 SPRR2AP35326 72 aa5.89□□□□□ -1.47
CCDC38-205ENST00000546947 CYSTM1Q9H1C7 97 aa5.89□□□□□ -1.47
CCDC38-205ENST00000546947 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
CCDC38-205ENST00000546947 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
CCDC38-205ENST00000546947 LCE1AQ5T7P2 110 aa5.81□□□□□ -1.48
CCDC38-205ENST00000546947 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
CCDC38-205ENST00000546947 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
CCDC38-205ENST00000546947 A0A1B0GU33 70 aa5.78□□□□□ -1.48
CCDC38-205ENST00000546947 A0A0D9SG42 100 aa5.76□□□□□ -1.49
CCDC38-205ENST00000546947 SPATA8Q6RVD6 105 aa5.76□□□□□ -1.49
CCDC38-205ENST00000546947 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
CCDC38-205ENST00000546947 A0A1B0GU69 56 aa5.71□□□□□ -1.5
CCDC38-205ENST00000546947 CCDC179H3BU77 68 aa5.7□□□□□ -1.5
CCDC38-205ENST00000546947 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
CCDC38-205ENST00000546947 SPRR2DP22532 72 aa5.69□□□□□ -1.5
CCDC38-205ENST00000546947 ATP5EP56381 51 aaPredicted RBP5.67□□□□□ -1.5
CCDC38-205ENST00000546947 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
CCDC38-205ENST00000546947 SMIM26A0A096LP01 95 aa5.64□□□□□ -1.51
CCDC38-205ENST00000546947 KRTAP2-2Q9BYT5 123 aa5.62□□□□□ -1.51
CCDC38-205ENST00000546947 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
CCDC38-205ENST00000546947 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
CCDC38-205ENST00000546947 A8MU10 97 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms