RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 KRTAP9-8Q9BYQ0 159 aa8.86□□□□□ -0.99
CCDC189-212ENST00000546006 SPANXA2-OT1Q8N9U9 137 aa8.85□□□□□ -0.99
CCDC189-212ENST00000546006 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
CCDC189-212ENST00000546006 CSAG1Q6PB30 78 aa8.83□□□□□ -1
CCDC189-212ENST00000546006 NDUFC1O43677 76 aa8.81□□□□□ -1
CCDC189-212ENST00000546006 CCDC179H3BU77 68 aa8.8□□□□□ -1
CCDC189-212ENST00000546006 MT2AP02795 61 aa8.8□□□□□ -1
CCDC189-212ENST00000546006 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
CCDC189-212ENST00000546006 CYSTM1Q9H1C7 97 aa8.8□□□□□ -1
CCDC189-212ENST00000546006 ACYP2P14621 99 aa8.79□□□□□ -1
CCDC189-212ENST00000546006 H7BZZ5 65 aa8.76□□□□□ -1.01
CCDC189-212ENST00000546006 MT1FP04733 61 aa8.73□□□□□ -1.01
CCDC189-212ENST00000546006 KRTAP10-10P60014 251 aa8.7□□□□□ -1.02
CCDC189-212ENST00000546006 CHKB-CPT1BH3BT56 60 aa8.64□□□□□ -1.03
CCDC189-212ENST00000546006 FSIP2Q5CZC0 6907 aa8.62□□□□□ -1.03
CCDC189-212ENST00000546006 H0YAA0 97 aa8.58□□□□□ -1.04
CCDC189-212ENST00000546006 SPTSSBQ8NFR3 76 aa8.58□□□□□ -1.04
CCDC189-212ENST00000546006 KRTAP9-3Q9BYQ3 159 aa8.57□□□□□ -1.04
CCDC189-212ENST00000546006 COA5Q86WW8 74 aa8.56□□□□□ -1.04
CCDC189-212ENST00000546006 TMEM258P61165 79 aa8.54□□□□□ -1.04
CCDC189-212ENST00000546006 KRTAP9-6A0A140TA67 174 aa8.53□□□□□ -1.04
CCDC189-212ENST00000546006 ATP5EP56381 51 aaPredicted RBP8.5□□□□□ -1.05
CCDC189-212ENST00000546006 ADM2Q7Z4H4 148 aa8.5□□□□□ -1.05
CCDC189-212ENST00000546006 CRCT1Q9UGL9 99 aa8.46□□□□□ -1.05
CCDC189-212ENST00000546006 USH2AO75445 5202 aa8.43□□□□□ -1.06
CCDC189-212ENST00000546006 LCE2BO14633 110 aa8.41□□□□□ -1.06
CCDC189-212ENST00000546006 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.06
CCDC189-212ENST00000546006 CRIPTQ9P021 101 aa8.4□□□□□ -1.06
CCDC189-212ENST00000546006 P0C880 135 aa8.38□□□□□ -1.07
CCDC189-212ENST00000546006 KRTAP19-1Q8IUB9 90 aa8.38□□□□□ -1.07
CCDC189-212ENST00000546006 SPRR2GQ9BYE4 73 aa8.35□□□□□ -1.07
CCDC189-212ENST00000546006 SSPOA2VEC9 5147 aa8.29□□□□□ -1.08
CCDC189-212ENST00000546006 SERP1Q9Y6X1 66 aa8.28□□□□□ -1.08
CCDC189-212ENST00000546006 R4GN34 69 aa8.24□□□□□ -1.09
CCDC189-212ENST00000546006 SEC61GP60059 68 aa8.22□□□□□ -1.09
CCDC189-212ENST00000546006 RPS28P62857 69 aaKnown RBP8.22□□□□□ -1.09
CCDC189-212ENST00000546006 KRTAP19-8Q3LI54 63 aa8.22□□□□□ -1.09
CCDC189-212ENST00000546006 M0QZ58 72 aa8.2□□□□□ -1.1
CCDC189-212ENST00000546006 Q5VV11 94 aa8.17□□□□□ -1.1
CCDC189-212ENST00000546006 MT1BP07438 61 aa8.14□□□□□ -1.11
CCDC189-212ENST00000546006 A0A1B0GU69 56 aa8.12□□□□□ -1.11
CCDC189-212ENST00000546006 LINC01558Q9Y6Z2 57 aa8.07□□□□□ -1.12
CCDC189-212ENST00000546006 FCGBPQ9Y6R7 5405 aaPredicted RBP8.06□□□□□ -1.12
CCDC189-212ENST00000546006 LINC01554Q52M75 96 aa8.05□□□□□ -1.12
CCDC189-212ENST00000546006 SMIM26A0A096LP01 95 aa8.04□□□□□ -1.12
CCDC189-212ENST00000546006 A0A1B0GU33 70 aa8.03□□□□□ -1.12
CCDC189-212ENST00000546006 KRTAP19-6Q3LI70 58 aa8.03□□□□□ -1.12
CCDC189-212ENST00000546006 KRTAP13-4Q3LI77 160 aa8.03□□□□□ -1.12
CCDC189-212ENST00000546006 PRR15LQ9BU68 103 aa8.02□□□□□ -1.13
CCDC189-212ENST00000546006 PLAC4Q8WY50 150 aa7.96□□□□□ -1.14
CCDC189-212ENST00000546006 V9GYY9 64 aa7.93□□□□□ -1.14
CCDC189-212ENST00000546006 SPATA8Q6RVD6 105 aa7.93□□□□□ -1.14
CCDC189-212ENST00000546006 Q1T7F1 81 aa7.92□□□□□ -1.14
CCDC189-212ENST00000546006 A6NN06 94 aa7.9□□□□□ -1.14
CCDC189-212ENST00000546006 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.87□□□□□ -1.15
CCDC189-212ENST00000546006 KRTAP10-5P60370 271 aa7.85□□□□□ -1.15
CCDC189-212ENST00000546006 A0A0D9SG42 100 aa7.84□□□□□ -1.15
CCDC189-212ENST00000546006 PSPHP1O15172 72 aa7.78□□□□□ -1.16
CCDC189-212ENST00000546006 PRO0628Q9UI54 55 aa7.78□□□□□ -1.16
CCDC189-212ENST00000546006 UQCR11O14957 56 aa7.77□□□□□ -1.17
CCDC189-212ENST00000546006 MT1XP80297 61 aa7.76□□□□□ -1.17
CCDC189-212ENST00000546006 PRO2289Q9P1D8 64 aa7.76□□□□□ -1.17
CCDC189-212ENST00000546006 MACF1Q9UPN3 7388 aaKnown RBP7.75□□□□□ -1.17
CCDC189-212ENST00000546006 A8MU10 97 aa7.74□□□□□ -1.17
CCDC189-212ENST00000546006 KRTAP12-1P59990 96 aa7.7□□□□□ -1.18
CCDC189-212ENST00000546006 SPINT4Q6UDR6 99 aa7.7□□□□□ -1.18
CCDC189-212ENST00000546006 KRTAP9-7A8MTY7 169 aa7.69□□□□□ -1.18
CCDC189-212ENST00000546006 SYNE2Q8WXH0 6885 aaKnown RBP7.69□□□□□ -1.18
CCDC189-212ENST00000546006 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
CCDC189-212ENST00000546006 CAMK2N1Q7Z7J9 78 aa7.66□□□□□ -1.18
CCDC189-212ENST00000546006 MIR22HGQ0VDD5 57 aa7.64□□□□□ -1.19
CCDC189-212ENST00000546006 A6NED7 52 aa7.55□□□□□ -1.2
CCDC189-212ENST00000546006 KRTAP6-3Q3LI67 103 aa7.43□□□□□ -1.22
CCDC189-212ENST00000546006 KRTAP10-7P60409 375 aaPredicted RBP7.42□□□□□ -1.22
CCDC189-212ENST00000546006 KMT2DO14686 5537 aa7.4□□□□□ -1.22
CCDC189-212ENST00000546006 K7ERS5 55 aa7.39□□□□□ -1.23
CCDC189-212ENST00000546006 BRK1Q8WUW1 75 aa7.39□□□□□ -1.23
CCDC189-212ENST00000546006 CDC42SE1Q9NRR8 79 aa7.39□□□□□ -1.23
CCDC189-212ENST00000546006 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
CCDC189-212ENST00000546006 C10orf95Q9H7T3 257 aa7.32□□□□□ -1.24
CCDC189-212ENST00000546006 PMAIP1Q13794 54 aa7.29□□□□□ -1.24
CCDC189-212ENST00000546006 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
CCDC189-212ENST00000546006 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
CCDC189-212ENST00000546006 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
CCDC189-212ENST00000546006 MUC12Q9UKN1 5478 aa7.21□□□□□ -1.25
CCDC189-212ENST00000546006 TNP1P09430 55 aa7.19□□□□□ -1.26
CCDC189-212ENST00000546006 KRTAP5-9P26371 169 aa7.18□□□□□ -1.26
CCDC189-212ENST00000546006 NEBP20929 6669 aa7.18□□□□□ -1.26
CCDC189-212ENST00000546006 SPRR2FQ96RM1 72 aa7.08□□□□□ -1.28
CCDC189-212ENST00000546006 KTN1-AS1Q86SY8 53 aa7.07□□□□□ -1.28
CCDC189-212ENST00000546006 MDN1Q9NU22 5596 aa7.07□□□□□ -1.28
CCDC189-212ENST00000546006 KRTAP25-1Q3LHN0 102 aa7.05□□□□□ -1.28
CCDC189-212ENST00000546006 ROMO1P60602 79 aa7□□□□□ -1.29
CCDC189-212ENST00000546006 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
CCDC189-212ENST00000546006 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
CCDC189-212ENST00000546006 KRTAP19-5Q3LI72 72 aa6.89□□□□□ -1.31
CCDC189-212ENST00000546006 SPRR2EP22531 72 aa6.86□□□□□ -1.31
CCDC189-212ENST00000546006 SPRR2BP35325 72 aa6.86□□□□□ -1.31
CCDC189-212ENST00000546006 SPRR2AP35326 72 aa6.86□□□□□ -1.31
CCDC189-212ENST00000546006 MT1EP04732 61 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms