RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 C7orf65Q6ZTY9 151 aa5.83□□□□□ -1.48
LINC00939-203ENST00000545784 LINC00313P59037 77 aa5.83□□□□□ -1.48
LINC00939-203ENST00000545784 SPINK7P58062 85 aa5.82□□□□□ -1.48
LINC00939-203ENST00000545784 RETNLBQ9BQ08 111 aa5.81□□□□□ -1.48
LINC00939-203ENST00000545784 IGKV2-30P06310 120 aa5.78□□□□□ -1.48
LINC00939-203ENST00000545784 LRP2P98164 4655 aa5.77□□□□□ -1.49
LINC00939-203ENST00000545784 RBM12B-AS1Q9P1G2 102 aa5.77□□□□□ -1.49
LINC00939-203ENST00000545784 A0A1B0GU69 56 aa5.76□□□□□ -1.49
LINC00939-203ENST00000545784 LPAP08519 4548 aa5.76□□□□□ -1.49
LINC00939-203ENST00000545784 KRTAP16-1A8MUX0 517 aa5.71□□□□□ -1.5
LINC00939-203ENST00000545784 SPATA8Q6RVD6 105 aa5.71□□□□□ -1.5
LINC00939-203ENST00000545784 UBR4Q5T4S7 5183 aa5.71□□□□□ -1.5
LINC00939-203ENST00000545784 UQCR11O14957 56 aa5.7□□□□□ -1.5
LINC00939-203ENST00000545784 LCE2CQ5TA81 110 aa5.7□□□□□ -1.5
LINC00939-203ENST00000545784 TPRXLQ17RH7 258 aa5.69□□□□□ -1.5
LINC00939-203ENST00000545784 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
LINC00939-203ENST00000545784 MIR22HGQ0VDD5 57 aa5.66□□□□□ -1.5
LINC00939-203ENST00000545784 IGKV2D-30A0A075B6S6 120 aa5.65□□□□□ -1.5
LINC00939-203ENST00000545784 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
LINC00939-203ENST00000545784 RNF213Q63HN8 5207 aa5.62□□□□□ -1.51
LINC00939-203ENST00000545784 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
LINC00939-203ENST00000545784 XP32Q5T750 250 aa5.6□□□□□ -1.51
LINC00939-203ENST00000545784 MUC17Q685J3 4493 aa5.59□□□□□ -1.51
LINC00939-203ENST00000545784 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.54□□□□□ -1.52
LINC00939-203ENST00000545784 MUC2Q02817 5179 aa5.53□□□□□ -1.52
LINC00939-203ENST00000545784 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
LINC00939-203ENST00000545784 KRTAP9-2Q9BYQ4 174 aa5.52□□□□□ -1.53
LINC00939-203ENST00000545784 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
LINC00939-203ENST00000545784 KRTAP9-6A0A140TA67 174 aa5.51□□□□□ -1.53
LINC00939-203ENST00000545784 RPL37P61927 97 aaKnown RBP5.49□□□□□ -1.53
LINC00939-203ENST00000545784 SEC61BP60468 96 aaKnown RBP5.49□□□□□ -1.53
LINC00939-203ENST00000545784 C20orf166-AS1Q96NR2 134 aa5.49□□□□□ -1.53
LINC00939-203ENST00000545784 A8MUU9 505 aa5.48□□□□□ -1.53
LINC00939-203ENST00000545784 ADM2Q7Z4H4 148 aa5.48□□□□□ -1.53
LINC00939-203ENST00000545784 KRTAP4-1Q9BYQ7 146 aa5.47□□□□□ -1.53
LINC00939-203ENST00000545784 A0A1B0GU33 70 aa5.41□□□□□ -1.54
LINC00939-203ENST00000545784 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
LINC00939-203ENST00000545784 H0YAA0 97 aa5.39□□□□□ -1.55
LINC00939-203ENST00000545784 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
LINC00939-203ENST00000545784 K7ERS5 55 aa5.36□□□□□ -1.55
LINC00939-203ENST00000545784 FAT4Q6V0I7 4981 aa5.36□□□□□ -1.55
LINC00939-203ENST00000545784 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
LINC00939-203ENST00000545784 KRTAP3-1Q9BYR8 98 aa5.35□□□□□ -1.55
LINC00939-203ENST00000545784 COX6B2Q6YFQ2 88 aa5.33□□□□□ -1.56
LINC00939-203ENST00000545784 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
LINC00939-203ENST00000545784 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
LINC00939-203ENST00000545784 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
LINC00939-203ENST00000545784 H3BS24 57 aa5.28□□□□□ -1.56
LINC00939-203ENST00000545784 KRTAP9-9Q9BYP9 154 aa5.25□□□□□ -1.57
LINC00939-203ENST00000545784 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
LINC00939-203ENST00000545784 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
LINC00939-203ENST00000545784 ROMO1P60602 79 aa5.18□□□□□ -1.58
LINC00939-203ENST00000545784 MT1HP80294 61 aa5.16□□□□□ -1.58
LINC00939-203ENST00000545784 KRTAP4-12Q9BQ66 201 aa5.16□□□□□ -1.58
LINC00939-203ENST00000545784 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
LINC00939-203ENST00000545784 KRTAP10-6P60371 365 aaPredicted RBP5.14□□□□□ -1.59
LINC00939-203ENST00000545784 S4R3F8 94 aa5.14□□□□□ -1.59
LINC00939-203ENST00000545784 KRTAP13-4Q3LI77 160 aa5.05□□□□□ -1.6
LINC00939-203ENST00000545784 A0A0D9SG42 100 aa5.04□□□□□ -1.6
LINC00939-203ENST00000545784 CRIPTQ9P021 101 aa5.03□□□□□ -1.6
LINC00939-203ENST00000545784 M0R2T5 61 aa5.02□□□□□ -1.61
LINC00939-203ENST00000545784 LCE1DQ5T752 114 aa5□□□□□ -1.61
LINC00939-203ENST00000545784 P0C880 135 aa4.99□□□□□ -1.61
LINC00939-203ENST00000545784 M0QZ58 72 aa4.98□□□□□ -1.61
LINC00939-203ENST00000545784 SPINT4Q6UDR6 99 aa4.95□□□□□ -1.62
LINC00939-203ENST00000545784 KRTAP9-8Q9BYQ0 159 aa4.95□□□□□ -1.62
LINC00939-203ENST00000545784 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
LINC00939-203ENST00000545784 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
LINC00939-203ENST00000545784 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
LINC00939-203ENST00000545784 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
LINC00939-203ENST00000545784 MT2AP02795 61 aa4.88□□□□□ -1.63
LINC00939-203ENST00000545784 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
LINC00939-203ENST00000545784 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
LINC00939-203ENST00000545784 MT1FP04733 61 aa4.85□□□□□ -1.63
LINC00939-203ENST00000545784 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
LINC00939-203ENST00000545784 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
LINC00939-203ENST00000545784 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
LINC00939-203ENST00000545784 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
LINC00939-203ENST00000545784 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
LINC00939-203ENST00000545784 R4GN34 69 aa4.78□□□□□ -1.64
LINC00939-203ENST00000545784 USH2AO75445 5202 aa4.73□□□□□ -1.65
LINC00939-203ENST00000545784 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
LINC00939-203ENST00000545784 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
LINC00939-203ENST00000545784 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
LINC00939-203ENST00000545784 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
LINC00939-203ENST00000545784 SSPOA2VEC9 5147 aa4.62□□□□□ -1.67
LINC00939-203ENST00000545784 SPRR2GQ9BYE4 73 aa4.62□□□□□ -1.67
LINC00939-203ENST00000545784 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
LINC00939-203ENST00000545784 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
LINC00939-203ENST00000545784 KRTAP19-8Q3LI54 63 aa4.56□□□□□ -1.68
LINC00939-203ENST00000545784 CAMK2N1Q7Z7J9 78 aa4.55□□□□□ -1.68
LINC00939-203ENST00000545784 MT1BP07438 61 aa4.53□□□□□ -1.68
LINC00939-203ENST00000545784 FCGBPQ9Y6R7 5405 aaPredicted RBP4.5□□□□□ -1.69
LINC00939-203ENST00000545784 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
LINC00939-203ENST00000545784 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
LINC00939-203ENST00000545784 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
LINC00939-203ENST00000545784 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
LINC00939-203ENST00000545784 TNP1P09430 55 aa4.42□□□□□ -1.7
LINC00939-203ENST00000545784 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
LINC00939-203ENST00000545784 MT1XP80297 61 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms