RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 C7orf65Q6ZTY9 151 aa3.62□□□□□ -1.83
CPSF7-224ENST00000544990 ACYP1P07311 99 aa3.6□□□□□ -1.83
CPSF7-224ENST00000544990 H1FX-AS1Q4G0G2 97 aa3.59□□□□□ -1.83
CPSF7-224ENST00000544990 TP53AIP1Q9HCN2 124 aa3.59□□□□□ -1.83
CPSF7-224ENST00000544990 MT2AP02795 61 aa3.57□□□□□ -1.84
CPSF7-224ENST00000544990 FAM240AA0A1B0GVK7 77 aa3.56□□□□□ -1.84
CPSF7-224ENST00000544990 KRTAP10-10P60014 251 aa3.56□□□□□ -1.84
CPSF7-224ENST00000544990 J3QR89 54 aa3.54□□□□□ -1.84
CPSF7-224ENST00000544990 MT1FP04733 61 aa3.54□□□□□ -1.84
CPSF7-224ENST00000544990 C4orf26Q17RF5 130 aa3.54□□□□□ -1.84
CPSF7-224ENST00000544990 C5orf47Q569G3 176 aa3.54□□□□□ -1.84
CPSF7-224ENST00000544990 ATP5EP2Q5VTU8 51 aa3.54□□□□□ -1.84
CPSF7-224ENST00000544990 HIST1H4AP62805 103 aaKnown RBP3.52□□□□□ -1.85
CPSF7-224ENST00000544990 TRAV22A0A0B4J277 110 aa3.5□□□□□ -1.85
CPSF7-224ENST00000544990 SEC61GP60059 68 aa3.5□□□□□ -1.85
CPSF7-224ENST00000544990 LINC00643Q86TS7 51 aa3.5□□□□□ -1.85
CPSF7-224ENST00000544990 C1orf64Q8NEQ6 169 aa3.5□□□□□ -1.85
CPSF7-224ENST00000544990 LOC101927531A0A1B0GV80 90 aa3.48□□□□□ -1.85
CPSF7-224ENST00000544990 UQCRQO14949 82 aa3.48□□□□□ -1.85
CPSF7-224ENST00000544990 CYP4F30PQ9H0H9 118 aa3.48□□□□□ -1.85
CPSF7-224ENST00000544990 S4R3F8 94 aa3.47□□□□□ -1.85
CPSF7-224ENST00000544990 ATOX1O00244 68 aa3.46□□□□□ -1.86
CPSF7-224ENST00000544990 CSAG1Q6PB30 78 aa3.46□□□□□ -1.86
CPSF7-224ENST00000544990 A0A087WVE0 104 aa3.45□□□□□ -1.86
CPSF7-224ENST00000544990 H0Y9P7 68 aa3.45□□□□□ -1.86
CPSF7-224ENST00000544990 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
CPSF7-224ENST00000544990 LCA10Q71F78 164 aa3.43□□□□□ -1.86
CPSF7-224ENST00000544990 FAM236AA0A1B0GUQ0 79 aa3.42□□□□□ -1.86
CPSF7-224ENST00000544990 FAM236BA0A1B0GV22 79 aa3.42□□□□□ -1.86
CPSF7-224ENST00000544990 MP68P56378 58 aa3.41□□□□□ -1.86
CPSF7-224ENST00000544990 ANAPC13Q9BS18 74 aa3.41□□□□□ -1.86
CPSF7-224ENST00000544990 LINC00208Q96KT6 92 aa3.4□□□□□ -1.87
CPSF7-224ENST00000544990 MT-ATP8P03928 68 aa3.39□□□□□ -1.87
CPSF7-224ENST00000544990 USH2AO75445 5202 aa3.38□□□□□ -1.87
CPSF7-224ENST00000544990 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
CPSF7-224ENST00000544990 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
CPSF7-224ENST00000544990 A8MUN3 132 aa3.38□□□□□ -1.87
CPSF7-224ENST00000544990 V9GYY9 64 aa3.38□□□□□ -1.87
CPSF7-224ENST00000544990 H3BPC8 53 aa3.37□□□□□ -1.87
CPSF7-224ENST00000544990 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
CPSF7-224ENST00000544990 NDUFC1O43677 76 aa3.36□□□□□ -1.87
CPSF7-224ENST00000544990 KRTAP19-6Q3LI70 58 aa3.36□□□□□ -1.87
CPSF7-224ENST00000544990 KLKP1Q107X0 134 aa3.35□□□□□ -1.87
CPSF7-224ENST00000544990 IMUPQ9GZP8 106 aa3.35□□□□□ -1.87
CPSF7-224ENST00000544990 CCDC179H3BU77 68 aa3.32□□□□□ -1.88
CPSF7-224ENST00000544990 SPRR2GQ9BYE4 73 aa3.32□□□□□ -1.88
CPSF7-224ENST00000544990 CRIPTQ9P021 101 aa3.32□□□□□ -1.88
CPSF7-224ENST00000544990 Q5VV11 94 aa3.31□□□□□ -1.88
CPSF7-224ENST00000544990 SMIM20Q8N5G0 67 aa3.31□□□□□ -1.88
CPSF7-224ENST00000544990 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
CPSF7-224ENST00000544990 A8MU10 97 aa3.3□□□□□ -1.88
CPSF7-224ENST00000544990 H0YAA0 97 aa3.3□□□□□ -1.88
CPSF7-224ENST00000544990 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
CPSF7-224ENST00000544990 KRTAP19-8Q3LI54 63 aa3.28□□□□□ -1.88
CPSF7-224ENST00000544990 TRAV7A0A075B6U4 112 aa3.27□□□□□ -1.89
CPSF7-224ENST00000544990 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
CPSF7-224ENST00000544990 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
CPSF7-224ENST00000544990 DMAC1Q96GE9 116 aa3.27□□□□□ -1.89
CPSF7-224ENST00000544990 MT1BP07438 61 aa3.26□□□□□ -1.89
CPSF7-224ENST00000544990 RPS28P62857 69 aaKnown RBP3.26□□□□□ -1.89
CPSF7-224ENST00000544990 ADM2Q7Z4H4 148 aa3.26□□□□□ -1.89
CPSF7-224ENST00000544990 PRO0628Q9UI54 55 aa3.26□□□□□ -1.89
CPSF7-224ENST00000544990 A6NN06 94 aa3.25□□□□□ -1.89
CPSF7-224ENST00000544990 ACYP2P14621 99 aa3.24□□□□□ -1.89
CPSF7-224ENST00000544990 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
CPSF7-224ENST00000544990 COX7CP15954 63 aa3.23□□□□□ -1.89
CPSF7-224ENST00000544990 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
CPSF7-224ENST00000544990 C20orf197Q8N268 126 aa3.23□□□□□ -1.89
CPSF7-224ENST00000544990 TMEM258P61165 79 aa3.22□□□□□ -1.89
CPSF7-224ENST00000544990 SPTSSBQ8NFR3 76 aa3.21□□□□□ -1.9
CPSF7-224ENST00000544990 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
CPSF7-224ENST00000544990 R4GN34 69 aa3.2□□□□□ -1.9
CPSF7-224ENST00000544990 SERP2Q8N6R1 65 aa3.19□□□□□ -1.9
CPSF7-224ENST00000544990 SNURFQ9Y675 71 aa3.19□□□□□ -1.9
CPSF7-224ENST00000544990 CHKB-CPT1BH3BT56 60 aa3.18□□□□□ -1.9
CPSF7-224ENST00000544990 P0C880 135 aa3.18□□□□□ -1.9
CPSF7-224ENST00000544990 CAMK2N1Q7Z7J9 78 aa3.17□□□□□ -1.9
CPSF7-224ENST00000544990 PLAC4Q8WY50 150 aa3.17□□□□□ -1.9
CPSF7-224ENST00000544990 M0QZ58 72 aa3.16□□□□□ -1.9
CPSF7-224ENST00000544990 SPANXA2-OT1Q8N9U9 137 aa3.16□□□□□ -1.9
CPSF7-224ENST00000544990 PRO2289Q9P1D8 64 aa3.14□□□□□ -1.91
CPSF7-224ENST00000544990 NEBP20929 6669 aa3.14□□□□□ -1.91
CPSF7-224ENST00000544990 SERP1Q9Y6X1 66 aa3.12□□□□□ -1.91
CPSF7-224ENST00000544990 ATP5EP56381 51 aaPredicted RBP3.11□□□□□ -1.91
CPSF7-224ENST00000544990 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
CPSF7-224ENST00000544990 CYSTM1Q9H1C7 97 aa3.11□□□□□ -1.91
CPSF7-224ENST00000544990 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
CPSF7-224ENST00000544990 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
CPSF7-224ENST00000544990 SMIM26A0A096LP01 95 aa3.09□□□□□ -1.91
CPSF7-224ENST00000544990 KRTAP20-1Q3LI63 56 aa3.09□□□□□ -1.91
CPSF7-224ENST00000544990 MT1XP80297 61 aa3.07□□□□□ -1.92
CPSF7-224ENST00000544990 H7BZZ5 65 aa3.06□□□□□ -1.92
CPSF7-224ENST00000544990 COA5Q86WW8 74 aa3.06□□□□□ -1.92
CPSF7-224ENST00000544990 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
CPSF7-224ENST00000544990 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
CPSF7-224ENST00000544990 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
CPSF7-224ENST00000544990 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
CPSF7-224ENST00000544990 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
CPSF7-224ENST00000544990 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
CPSF7-224ENST00000544990 KRTAP13-4Q3LI77 160 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms