RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CHKB-CPT1BH3BT56 60 aa7.09□□□□□ -1.27
HCFC2-202ENST00000544223 HMCN2Q8NDA2 5059 aa7.07□□□□□ -1.28
HCFC2-202ENST00000544223 PMAIP1Q13794 54 aa7.06□□□□□ -1.28
HCFC2-202ENST00000544223 PRR15LQ9BU68 103 aa7.06□□□□□ -1.28
HCFC2-202ENST00000544223 MUC17Q685J3 4493 aa7.03□□□□□ -1.28
HCFC2-202ENST00000544223 A8MU10 97 aa7□□□□□ -1.29
HCFC2-202ENST00000544223 RNF213Q63HN8 5207 aa7□□□□□ -1.29
HCFC2-202ENST00000544223 COX6B2Q6YFQ2 88 aa6.98□□□□□ -1.29
HCFC2-202ENST00000544223 UBR4Q5T4S7 5183 aa6.97□□□□□ -1.29
HCFC2-202ENST00000544223 A6NED7 52 aa6.97□□□□□ -1.29
HCFC2-202ENST00000544223 KRTAP4-1Q9BYQ7 146 aa6.97□□□□□ -1.29
HCFC2-202ENST00000544223 LINC01558Q9Y6Z2 57 aa6.97□□□□□ -1.29
HCFC2-202ENST00000544223 LCA10Q71F78 164 aa6.95□□□□□ -1.3
HCFC2-202ENST00000544223 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
HCFC2-202ENST00000544223 SPTSSBQ8NFR3 76 aa6.91□□□□□ -1.3
HCFC2-202ENST00000544223 KTN1-AS1Q86SY8 53 aa6.88□□□□□ -1.31
HCFC2-202ENST00000544223 FAT4Q6V0I7 4981 aa6.88□□□□□ -1.31
HCFC2-202ENST00000544223 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
HCFC2-202ENST00000544223 A6NN06 94 aa6.85□□□□□ -1.31
HCFC2-202ENST00000544223 A0A1B0GU69 56 aa6.84□□□□□ -1.31
HCFC2-202ENST00000544223 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.31
HCFC2-202ENST00000544223 KRTAP3-2Q9BYR7 98 aa6.81□□□□□ -1.32
HCFC2-202ENST00000544223 S4R3F8 94 aa6.8□□□□□ -1.32
HCFC2-202ENST00000544223 RBM12B-AS1Q9P1G2 102 aa6.78□□□□□ -1.32
HCFC2-202ENST00000544223 H1FX-AS1Q4G0G2 97 aa6.78□□□□□ -1.32
HCFC2-202ENST00000544223 KRTAP19-2Q3LHN2 52 aa6.68□□□□□ -1.34
HCFC2-202ENST00000544223 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
HCFC2-202ENST00000544223 SPATA8Q6RVD6 105 aa6.66□□□□□ -1.34
HCFC2-202ENST00000544223 P0C880 135 aa6.65□□□□□ -1.35
HCFC2-202ENST00000544223 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
HCFC2-202ENST00000544223 UQCR11O14957 56 aa6.6□□□□□ -1.35
HCFC2-202ENST00000544223 A0A1B0GU33 70 aa6.6□□□□□ -1.35
HCFC2-202ENST00000544223 ADM2Q7Z4H4 148 aa6.6□□□□□ -1.35
HCFC2-202ENST00000544223 H0YAA0 97 aa6.59□□□□□ -1.35
HCFC2-202ENST00000544223 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
HCFC2-202ENST00000544223 CSAG1Q6PB30 78 aa6.59□□□□□ -1.35
HCFC2-202ENST00000544223 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
HCFC2-202ENST00000544223 LCE2DQ5TA82 110 aaPredicted RBP6.53□□□□□ -1.36
HCFC2-202ENST00000544223 PRAC1Q96KF2 57 aa6.51□□□□□ -1.37
HCFC2-202ENST00000544223 A0A0D9SG42 100 aa6.5□□□□□ -1.37
HCFC2-202ENST00000544223 LCE2CQ5TA81 110 aa6.5□□□□□ -1.37
HCFC2-202ENST00000544223 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
HCFC2-202ENST00000544223 LINC01554Q52M75 96 aa6.39□□□□□ -1.39
HCFC2-202ENST00000544223 M0R2T5 61 aa6.36□□□□□ -1.39
HCFC2-202ENST00000544223 MT1HP80294 61 aa6.35□□□□□ -1.39
HCFC2-202ENST00000544223 M0QZ58 72 aa6.34□□□□□ -1.39
HCFC2-202ENST00000544223 R4GN34 69 aa6.31□□□□□ -1.4
HCFC2-202ENST00000544223 KRTAP12-2P59991 146 aa6.29□□□□□ -1.4
HCFC2-202ENST00000544223 SPINT4Q6UDR6 99 aa6.28□□□□□ -1.4
HCFC2-202ENST00000544223 KRTAP12-1P59990 96 aa6.22□□□□□ -1.41
HCFC2-202ENST00000544223 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
HCFC2-202ENST00000544223 KRTAP25-1Q3LHN0 102 aa6.16□□□□□ -1.42
HCFC2-202ENST00000544223 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
HCFC2-202ENST00000544223 K7ERS5 55 aa6.15□□□□□ -1.43
HCFC2-202ENST00000544223 MT1FP04733 61 aa6.15□□□□□ -1.43
HCFC2-202ENST00000544223 MT2AP02795 61 aa6.13□□□□□ -1.43
HCFC2-202ENST00000544223 KRTAP9-8Q9BYQ0 159 aa6.13□□□□□ -1.43
HCFC2-202ENST00000544223 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
HCFC2-202ENST00000544223 USH2AO75445 5202 aa6.06□□□□□ -1.44
HCFC2-202ENST00000544223 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
HCFC2-202ENST00000544223 ROMO1P60602 79 aa6□□□□□ -1.45
HCFC2-202ENST00000544223 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
HCFC2-202ENST00000544223 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.45
HCFC2-202ENST00000544223 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.46
HCFC2-202ENST00000544223 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
HCFC2-202ENST00000544223 FSIP2Q5CZC0 6907 aa5.88□□□□□ -1.47
HCFC2-202ENST00000544223 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
HCFC2-202ENST00000544223 LCE2BO14633 110 aa5.84□□□□□ -1.47
HCFC2-202ENST00000544223 PLAC4Q8WY50 150 aa5.81□□□□□ -1.48
HCFC2-202ENST00000544223 MT1BP07438 61 aa5.8□□□□□ -1.48
HCFC2-202ENST00000544223 KRTAP19-8Q3LI54 63 aa5.75□□□□□ -1.49
HCFC2-202ENST00000544223 KMT2DO14686 5537 aa5.7□□□□□ -1.5
HCFC2-202ENST00000544223 KRTAP10-5P60370 271 aa5.65□□□□□ -1.5
HCFC2-202ENST00000544223 MT1XP80297 61 aa5.65□□□□□ -1.5
HCFC2-202ENST00000544223 SSPOA2VEC9 5147 aa5.64□□□□□ -1.51
HCFC2-202ENST00000544223 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
HCFC2-202ENST00000544223 LUZP6Q538Z0 58 aa5.59□□□□□ -1.51
HCFC2-202ENST00000544223 TNP1P09430 55 aa5.58□□□□□ -1.52
HCFC2-202ENST00000544223 NDUFAF8A1L188 74 aa5.53□□□□□ -1.52
HCFC2-202ENST00000544223 KRTAP10-7P60409 375 aaPredicted RBP5.52□□□□□ -1.53
HCFC2-202ENST00000544223 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
HCFC2-202ENST00000544223 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
HCFC2-202ENST00000544223 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
HCFC2-202ENST00000544223 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
HCFC2-202ENST00000544223 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
HCFC2-202ENST00000544223 PP632Q6XCG6 107 aa5.35□□□□□ -1.55
HCFC2-202ENST00000544223 FCGBPQ9Y6R7 5405 aaPredicted RBP5.33□□□□□ -1.56
HCFC2-202ENST00000544223 KRTAP19-6Q3LI70 58 aa5.22□□□□□ -1.57
HCFC2-202ENST00000544223 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
HCFC2-202ENST00000544223 KRTAP19-5Q3LI72 72 aa5.18□□□□□ -1.58
HCFC2-202ENST00000544223 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
HCFC2-202ENST00000544223 MACF1Q9UPN3 7388 aaKnown RBP5.15□□□□□ -1.58
HCFC2-202ENST00000544223 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.59
HCFC2-202ENST00000544223 KRTAP9-2Q9BYQ4 174 aa5.14□□□□□ -1.59
HCFC2-202ENST00000544223 SYNE2Q8WXH0 6885 aaKnown RBP5.1□□□□□ -1.59
HCFC2-202ENST00000544223 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
HCFC2-202ENST00000544223 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
HCFC2-202ENST00000544223 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
HCFC2-202ENST00000544223 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
HCFC2-202ENST00000544223 MDN1Q9NU22 5596 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms