RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.07
TSFM-208ENST00000543727 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
TSFM-208ENST00000543727 LCE2BO14633 110 aa8.31□□□□□ -1.08
TSFM-208ENST00000543727 NDUFC1O43677 76 aa8.29□□□□□ -1.08
TSFM-208ENST00000543727 DMAC1Q96GE9 116 aa8.25□□□□□ -1.09
TSFM-208ENST00000543727 H0YAA0 97 aa8.2□□□□□ -1.1
TSFM-208ENST00000543727 SERP2Q8N6R1 65 aa8.16□□□□□ -1.1
TSFM-208ENST00000543727 USH2AO75445 5202 aa8.15□□□□□ -1.1
TSFM-208ENST00000543727 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
TSFM-208ENST00000543727 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
TSFM-208ENST00000543727 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
TSFM-208ENST00000543727 ACYP2P14621 99 aa8.1□□□□□ -1.11
TSFM-208ENST00000543727 SNURFQ9Y675 71 aa8.07□□□□□ -1.12
TSFM-208ENST00000543727 C20orf197Q8N268 126 aa8.06□□□□□ -1.12
TSFM-208ENST00000543727 KRTAP19-6Q3LI70 58 aa8.05□□□□□ -1.12
TSFM-208ENST00000543727 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
TSFM-208ENST00000543727 SSPOA2VEC9 5147 aa8.02□□□□□ -1.13
TSFM-208ENST00000543727 KRTAP19-8Q3LI54 63 aa8.01□□□□□ -1.13
TSFM-208ENST00000543727 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
TSFM-208ENST00000543727 SPTSSBQ8NFR3 76 aa8.01□□□□□ -1.13
TSFM-208ENST00000543727 Q5VV11 94 aa7.99□□□□□ -1.13
TSFM-208ENST00000543727 COX7CP15954 63 aa7.97□□□□□ -1.13
TSFM-208ENST00000543727 CHKB-CPT1BH3BT56 60 aa7.93□□□□□ -1.14
TSFM-208ENST00000543727 MT1BP07438 61 aa7.92□□□□□ -1.14
TSFM-208ENST00000543727 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.87□□□□□ -1.15
TSFM-208ENST00000543727 FCGBPQ9Y6R7 5405 aaPredicted RBP7.87□□□□□ -1.15
TSFM-208ENST00000543727 P0C880 135 aa7.84□□□□□ -1.15
TSFM-208ENST00000543727 R4GN34 69 aa7.84□□□□□ -1.15
TSFM-208ENST00000543727 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
TSFM-208ENST00000543727 ANAPC13Q9BS18 74 aa7.81□□□□□ -1.16
TSFM-208ENST00000543727 H7BZZ5 65 aa7.78□□□□□ -1.16
TSFM-208ENST00000543727 A6NN06 94 aa7.77□□□□□ -1.17
TSFM-208ENST00000543727 M0QZ58 72 aa7.75□□□□□ -1.17
TSFM-208ENST00000543727 COA5Q86WW8 74 aa7.74□□□□□ -1.17
TSFM-208ENST00000543727 KRTAP10-5P60370 271 aa7.73□□□□□ -1.17
TSFM-208ENST00000543727 KRTAP9-7A8MTY7 169 aa7.7□□□□□ -1.18
TSFM-208ENST00000543727 CYSTM1Q9H1C7 97 aa7.7□□□□□ -1.18
TSFM-208ENST00000543727 PLAC4Q8WY50 150 aa7.67□□□□□ -1.18
TSFM-208ENST00000543727 MACF1Q9UPN3 7388 aaKnown RBP7.64□□□□□ -1.19
TSFM-208ENST00000543727 PRO2289Q9P1D8 64 aa7.62□□□□□ -1.19
TSFM-208ENST00000543727 CCDC179H3BU77 68 aa7.58□□□□□ -1.2
TSFM-208ENST00000543727 ATP5EP56381 51 aaPredicted RBP7.58□□□□□ -1.2
TSFM-208ENST00000543727 SEC61GP60059 68 aa7.58□□□□□ -1.2
TSFM-208ENST00000543727 LINC01554Q52M75 96 aa7.58□□□□□ -1.2
TSFM-208ENST00000543727 SERP1Q9Y6X1 66 aa7.53□□□□□ -1.2
TSFM-208ENST00000543727 MT1XP80297 61 aa7.49□□□□□ -1.21
TSFM-208ENST00000543727 KRTAP6-3Q3LI67 103 aa7.48□□□□□ -1.21
TSFM-208ENST00000543727 SYNE2Q8WXH0 6885 aaKnown RBP7.45□□□□□ -1.22
TSFM-208ENST00000543727 TMEM258P61165 79 aa7.43□□□□□ -1.22
TSFM-208ENST00000543727 KRTAP13-4Q3LI77 160 aa7.41□□□□□ -1.22
TSFM-208ENST00000543727 A0A1B0GU33 70 aa7.37□□□□□ -1.23
TSFM-208ENST00000543727 A0A1B0GU69 56 aa7.37□□□□□ -1.23
TSFM-208ENST00000543727 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
TSFM-208ENST00000543727 PRR15LQ9BU68 103 aa7.28□□□□□ -1.24
TSFM-208ENST00000543727 KRTAP5-9P26371 169 aa7.26□□□□□ -1.25
TSFM-208ENST00000543727 SPATA8Q6RVD6 105 aa7.25□□□□□ -1.25
TSFM-208ENST00000543727 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
TSFM-208ENST00000543727 SMIM26A0A096LP01 95 aa7.21□□□□□ -1.26
TSFM-208ENST00000543727 A0A0D9SG42 100 aa7.21□□□□□ -1.26
TSFM-208ENST00000543727 LINC01558Q9Y6Z2 57 aa7.21□□□□□ -1.26
TSFM-208ENST00000543727 KRTAP10-12P60413 245 aa7.16□□□□□ -1.26
TSFM-208ENST00000543727 KRTAP10-7P60409 375 aaPredicted RBP7.13□□□□□ -1.27
TSFM-208ENST00000543727 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
TSFM-208ENST00000543727 KRTAP12-1P59990 96 aa7.12□□□□□ -1.27
TSFM-208ENST00000543727 SPINT4Q6UDR6 99 aa7.11□□□□□ -1.27
TSFM-208ENST00000543727 SPRR2FQ96RM1 72 aa7.06□□□□□ -1.28
TSFM-208ENST00000543727 KMT2DO14686 5537 aa7.04□□□□□ -1.28
TSFM-208ENST00000543727 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.29
TSFM-208ENST00000543727 A8MU10 97 aa7.02□□□□□ -1.29
TSFM-208ENST00000543727 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.29
TSFM-208ENST00000543727 V9GYY9 64 aa7.02□□□□□ -1.29
TSFM-208ENST00000543727 UQCR11O14957 56 aa7.01□□□□□ -1.29
TSFM-208ENST00000543727 NEBP20929 6669 aa6.97□□□□□ -1.29
TSFM-208ENST00000543727 MUC12Q9UKN1 5478 aa6.97□□□□□ -1.29
TSFM-208ENST00000543727 Q1T7F1 81 aa6.93□□□□□ -1.3
TSFM-208ENST00000543727 PCP4P48539 62 aa6.9□□□□□ -1.3
TSFM-208ENST00000543727 SPRR2EP22531 72 aa6.89□□□□□ -1.31
TSFM-208ENST00000543727 SPRR2BP35325 72 aa6.89□□□□□ -1.31
TSFM-208ENST00000543727 SPRR2AP35326 72 aa6.89□□□□□ -1.31
TSFM-208ENST00000543727 MIR22HGQ0VDD5 57 aa6.85□□□□□ -1.31
TSFM-208ENST00000543727 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.31
TSFM-208ENST00000543727 MDN1Q9NU22 5596 aa6.82□□□□□ -1.32
TSFM-208ENST00000543727 RPS28P62857 69 aaKnown RBP6.82□□□□□ -1.32
TSFM-208ENST00000543727 PSPHP1O15172 72 aa6.81□□□□□ -1.32
TSFM-208ENST00000543727 KRTAP20-1Q3LI63 56 aa6.79□□□□□ -1.32
TSFM-208ENST00000543727 TNP1P09430 55 aa6.77□□□□□ -1.33
TSFM-208ENST00000543727 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
TSFM-208ENST00000543727 K7ERS5 55 aa6.74□□□□□ -1.33
TSFM-208ENST00000543727 KRTAP2-3P0C7H8 128 aa6.7□□□□□ -1.34
TSFM-208ENST00000543727 KRTAP19-7Q3SYF9 63 aa6.7□□□□□ -1.34
TSFM-208ENST00000543727 KRTAP2-4Q9BYR9 128 aa6.7□□□□□ -1.34
TSFM-208ENST00000543727 SPRR2DP22532 72 aa6.66□□□□□ -1.34
TSFM-208ENST00000543727 A6NED7 52 aa6.64□□□□□ -1.35
TSFM-208ENST00000543727 MT1EP04732 61 aa6.63□□□□□ -1.35
TSFM-208ENST00000543727 KRTAP19-5Q3LI72 72 aa6.57□□□□□ -1.36
TSFM-208ENST00000543727 LCE3AQ5TA76 89 aa6.56□□□□□ -1.36
TSFM-208ENST00000543727 KRTAP19-3Q7Z4W3 81 aa6.55□□□□□ -1.36
TSFM-208ENST00000543727 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
TSFM-208ENST00000543727 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
TSFM-208ENST00000543727 KRTAP2-2Q9BYT5 123 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms