RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 COA5Q86WW8 74 aa6.03□□□□□ -1.44
COPS7A-217ENST00000543537 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
COPS7A-217ENST00000543537 Q1T7F1 81 aa5.99□□□□□ -1.45
COPS7A-217ENST00000543537 COX6B2Q6YFQ2 88 aa5.98□□□□□ -1.45
COPS7A-217ENST00000543537 C4orf26Q17RF5 130 aa5.94□□□□□ -1.46
COPS7A-217ENST00000543537 LCE2DQ5TA82 110 aaPredicted RBP5.94□□□□□ -1.46
COPS7A-217ENST00000543537 RBM12B-AS1Q9P1G2 102 aa5.94□□□□□ -1.46
COPS7A-217ENST00000543537 MT1HP80294 61 aa5.92□□□□□ -1.46
COPS7A-217ENST00000543537 PRR15LQ9BU68 103 aa5.91□□□□□ -1.46
COPS7A-217ENST00000543537 FSIP2Q5CZC0 6907 aa5.91□□□□□ -1.46
COPS7A-217ENST00000543537 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
COPS7A-217ENST00000543537 SEC61GP60059 68 aa5.86□□□□□ -1.47
COPS7A-217ENST00000543537 MPLKIPQ8TAP9 179 aa5.86□□□□□ -1.47
COPS7A-217ENST00000543537 FLGP20930 4061 aaPredicted RBP5.85□□□□□ -1.47
COPS7A-217ENST00000543537 LORP23490 312 aaPredicted RBP5.84□□□□□ -1.47
COPS7A-217ENST00000543537 H1FX-AS1Q4G0G2 97 aa5.84□□□□□ -1.47
COPS7A-217ENST00000543537 KRTAP10-6P60371 365 aaPredicted RBP5.82□□□□□ -1.48
COPS7A-217ENST00000543537 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
COPS7A-217ENST00000543537 CRCT1Q9UGL9 99 aa5.81□□□□□ -1.48
COPS7A-217ENST00000543537 A0A1B0GU69 56 aa5.79□□□□□ -1.48
COPS7A-217ENST00000543537 S4R3F8 94 aa5.77□□□□□ -1.49
COPS7A-217ENST00000543537 M0R2T5 61 aa5.74□□□□□ -1.49
COPS7A-217ENST00000543537 PSPHP1O15172 72 aa5.73□□□□□ -1.49
COPS7A-217ENST00000543537 CSAG1Q6PB30 78 aa5.73□□□□□ -1.49
COPS7A-217ENST00000543537 Q5VV11 94 aa5.71□□□□□ -1.5
COPS7A-217ENST00000543537 UQCR11O14957 56 aa5.68□□□□□ -1.5
COPS7A-217ENST00000543537 A6NED7 52 aa5.67□□□□□ -1.5
COPS7A-217ENST00000543537 LCA10Q71F78 164 aa5.67□□□□□ -1.5
COPS7A-217ENST00000543537 H0YAA0 97 aa5.64□□□□□ -1.51
COPS7A-217ENST00000543537 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
COPS7A-217ENST00000543537 PRO0628Q9UI54 55 aa5.62□□□□□ -1.51
COPS7A-217ENST00000543537 KRTAP3-3Q9BYR6 98 aa5.61□□□□□ -1.51
COPS7A-217ENST00000543537 CDC42SE1Q9NRR8 79 aa5.61□□□□□ -1.51
COPS7A-217ENST00000543537 BRK1Q8WUW1 75 aa5.6□□□□□ -1.51
COPS7A-217ENST00000543537 A0A1B0GU33 70 aa5.59□□□□□ -1.51
COPS7A-217ENST00000543537 SPATA8Q6RVD6 105 aa5.57□□□□□ -1.52
COPS7A-217ENST00000543537 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
COPS7A-217ENST00000543537 M0QZ58 72 aa5.51□□□□□ -1.53
COPS7A-217ENST00000543537 MT2AP02795 61 aa5.5□□□□□ -1.53
COPS7A-217ENST00000543537 K7ERS5 55 aa5.48□□□□□ -1.53
COPS7A-217ENST00000543537 USH2AO75445 5202 aa5.48□□□□□ -1.53
COPS7A-217ENST00000543537 ADM2Q7Z4H4 148 aa5.47□□□□□ -1.53
COPS7A-217ENST00000543537 MT1FP04733 61 aa5.46□□□□□ -1.54
COPS7A-217ENST00000543537 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
COPS7A-217ENST00000543537 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
COPS7A-217ENST00000543537 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
COPS7A-217ENST00000543537 CRIPTQ9P021 101 aa5.44□□□□□ -1.54
COPS7A-217ENST00000543537 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
COPS7A-217ENST00000543537 SSPOA2VEC9 5147 aa5.42□□□□□ -1.54
COPS7A-217ENST00000543537 LCE2BO14633 110 aa5.41□□□□□ -1.54
COPS7A-217ENST00000543537 KRTAP10-10P60014 251 aa5.4□□□□□ -1.54
COPS7A-217ENST00000543537 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
COPS7A-217ENST00000543537 R4GN34 69 aa5.37□□□□□ -1.55
COPS7A-217ENST00000543537 P0C880 135 aa5.36□□□□□ -1.55
COPS7A-217ENST00000543537 FCGBPQ9Y6R7 5405 aaPredicted RBP5.35□□□□□ -1.55
COPS7A-217ENST00000543537 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
COPS7A-217ENST00000543537 A6NN06 94 aa5.29□□□□□ -1.56
COPS7A-217ENST00000543537 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
COPS7A-217ENST00000543537 MACF1Q9UPN3 7388 aaKnown RBP5.26□□□□□ -1.57
COPS7A-217ENST00000543537 KRTAP19-6Q3LI70 58 aa5.26□□□□□ -1.57
COPS7A-217ENST00000543537 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
COPS7A-217ENST00000543537 A8MU10 97 aa5.24□□□□□ -1.57
COPS7A-217ENST00000543537 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
COPS7A-217ENST00000543537 A0A0D9SG42 100 aa5.2□□□□□ -1.58
COPS7A-217ENST00000543537 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
COPS7A-217ENST00000543537 SPINT4Q6UDR6 99 aa5.15□□□□□ -1.59
COPS7A-217ENST00000543537 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
COPS7A-217ENST00000543537 LINC01554Q52M75 96 aa5.13□□□□□ -1.59
COPS7A-217ENST00000543537 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
COPS7A-217ENST00000543537 ROMO1P60602 79 aa5.1□□□□□ -1.59
COPS7A-217ENST00000543537 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
COPS7A-217ENST00000543537 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
COPS7A-217ENST00000543537 CAMK2N1Q7Z7J9 78 aa5.04□□□□□ -1.6
COPS7A-217ENST00000543537 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
COPS7A-217ENST00000543537 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
COPS7A-217ENST00000543537 MT1BP07438 61 aa5.02□□□□□ -1.61
COPS7A-217ENST00000543537 NEBP20929 6669 aa5□□□□□ -1.61
COPS7A-217ENST00000543537 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
COPS7A-217ENST00000543537 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
COPS7A-217ENST00000543537 TNP1P09430 55 aa4.86□□□□□ -1.63
COPS7A-217ENST00000543537 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
COPS7A-217ENST00000543537 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
COPS7A-217ENST00000543537 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
COPS7A-217ENST00000543537 MUC12Q9UKN1 5478 aa4.84□□□□□ -1.63
COPS7A-217ENST00000543537 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
COPS7A-217ENST00000543537 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
COPS7A-217ENST00000543537 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
COPS7A-217ENST00000543537 KRTAP20-1Q3LI63 56 aa4.75□□□□□ -1.65
COPS7A-217ENST00000543537 KMT2DO14686 5537 aa4.74□□□□□ -1.65
COPS7A-217ENST00000543537 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
COPS7A-217ENST00000543537 MT1XP80297 61 aa4.69□□□□□ -1.66
COPS7A-217ENST00000543537 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
COPS7A-217ENST00000543537 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
COPS7A-217ENST00000543537 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
COPS7A-217ENST00000543537 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
COPS7A-217ENST00000543537 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
COPS7A-217ENST00000543537 SPRR2EP22531 72 aa4.51□□□□□ -1.69
COPS7A-217ENST00000543537 SPRR2BP35325 72 aa4.51□□□□□ -1.69
COPS7A-217ENST00000543537 SPRR2AP35326 72 aa4.51□□□□□ -1.69
COPS7A-217ENST00000543537 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms