RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 FAM236CP0DP71 79 aa5.26□□□□□ -1.57
DDX11-225ENST00000543511 TRAV22A0A0B4J277 110 aa5.25□□□□□ -1.57
DDX11-225ENST00000543511 UQCRQO14949 82 aa5.25□□□□□ -1.57
DDX11-225ENST00000543511 IMUPQ9GZP8 106 aa5.24□□□□□ -1.57
DDX11-225ENST00000543511 H0Y9P7 68 aa5.2□□□□□ -1.58
DDX11-225ENST00000543511 MT3P25713 68 aa5.2□□□□□ -1.58
DDX11-225ENST00000543511 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
DDX11-225ENST00000543511 LOC101927531A0A1B0GV80 90 aa5.19□□□□□ -1.58
DDX11-225ENST00000543511 M0R2T5 61 aa5.19□□□□□ -1.58
DDX11-225ENST00000543511 CYP4F30PQ9H0H9 118 aa5.19□□□□□ -1.58
DDX11-225ENST00000543511 C4orf26Q17RF5 130 aa5.18□□□□□ -1.58
DDX11-225ENST00000543511 ATOX1O00244 68 aa5.17□□□□□ -1.58
DDX11-225ENST00000543511 FAM236AA0A1B0GUQ0 79 aa5.16□□□□□ -1.58
DDX11-225ENST00000543511 FAM236BA0A1B0GV22 79 aa5.16□□□□□ -1.58
DDX11-225ENST00000543511 SCGB1A1P11684 91 aa5.15□□□□□ -1.59
DDX11-225ENST00000543511 H1FX-AS1Q4G0G2 97 aa5.15□□□□□ -1.59
DDX11-225ENST00000543511 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
DDX11-225ENST00000543511 C1orf64Q8NEQ6 169 aa5.14□□□□□ -1.59
DDX11-225ENST00000543511 C5orf47Q569G3 176 aa5.13□□□□□ -1.59
DDX11-225ENST00000543511 LINC00208Q96KT6 92 aa5.13□□□□□ -1.59
DDX11-225ENST00000543511 MP68P56378 58 aa5.12□□□□□ -1.59
DDX11-225ENST00000543511 H3BPC8 53 aa5.1□□□□□ -1.59
DDX11-225ENST00000543511 KLKP1Q107X0 134 aa5.1□□□□□ -1.59
DDX11-225ENST00000543511 TRAV7A0A075B6U4 112 aa5.09□□□□□ -1.59
DDX11-225ENST00000543511 SEC61GP60059 68 aa5.08□□□□□ -1.6
DDX11-225ENST00000543511 SMIM20Q8N5G0 67 aa5.08□□□□□ -1.6
DDX11-225ENST00000543511 MT2AP02795 61 aa5.05□□□□□ -1.6
DDX11-225ENST00000543511 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
DDX11-225ENST00000543511 S4R3F8 94 aa5.03□□□□□ -1.6
DDX11-225ENST00000543511 MT1FP04733 61 aa5.02□□□□□ -1.61
DDX11-225ENST00000543511 LCA10Q71F78 164 aa5.01□□□□□ -1.61
DDX11-225ENST00000543511 SERP2Q8N6R1 65 aa5.01□□□□□ -1.61
DDX11-225ENST00000543511 A8MUN3 132 aa4.99□□□□□ -1.61
DDX11-225ENST00000543511 DMAC1Q96GE9 116 aa4.96□□□□□ -1.62
DDX11-225ENST00000543511 SNURFQ9Y675 71 aa4.96□□□□□ -1.62
DDX11-225ENST00000543511 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
DDX11-225ENST00000543511 C20orf197Q8N268 126 aa4.95□□□□□ -1.62
DDX11-225ENST00000543511 CSAG1Q6PB30 78 aa4.94□□□□□ -1.62
DDX11-225ENST00000543511 COX7CP15954 63 aa4.92□□□□□ -1.62
DDX11-225ENST00000543511 NDUFC1O43677 76 aa4.89□□□□□ -1.63
DDX11-225ENST00000543511 SPANXA2-OT1Q8N9U9 137 aa4.87□□□□□ -1.63
DDX11-225ENST00000543511 ANAPC13Q9BS18 74 aa4.86□□□□□ -1.63
DDX11-225ENST00000543511 CYSTM1Q9H1C7 97 aa4.86□□□□□ -1.63
DDX11-225ENST00000543511 ACYP2P14621 99 aa4.84□□□□□ -1.63
DDX11-225ENST00000543511 H0YAA0 97 aa4.83□□□□□ -1.64
DDX11-225ENST00000543511 USH2AO75445 5202 aa4.82□□□□□ -1.64
DDX11-225ENST00000543511 H7BZZ5 65 aa4.82□□□□□ -1.64
DDX11-225ENST00000543511 LCE1FQ5T754 118 aa4.82□□□□□ -1.64
DDX11-225ENST00000543511 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
DDX11-225ENST00000543511 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
DDX11-225ENST00000543511 CRCT1Q9UGL9 99 aa4.79□□□□□ -1.64
DDX11-225ENST00000543511 CCDC179H3BU77 68 aa4.78□□□□□ -1.64
DDX11-225ENST00000543511 ADM2Q7Z4H4 148 aa4.76□□□□□ -1.65
DDX11-225ENST00000543511 SPRR2GQ9BYE4 73 aa4.75□□□□□ -1.65
DDX11-225ENST00000543511 CHKB-CPT1BH3BT56 60 aa4.74□□□□□ -1.65
DDX11-225ENST00000543511 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
DDX11-225ENST00000543511 COA5Q86WW8 74 aa4.73□□□□□ -1.65
DDX11-225ENST00000543511 SPTSSBQ8NFR3 76 aa4.72□□□□□ -1.65
DDX11-225ENST00000543511 CRIPTQ9P021 101 aa4.72□□□□□ -1.65
DDX11-225ENST00000543511 P0C880 135 aa4.71□□□□□ -1.66
DDX11-225ENST00000543511 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
DDX11-225ENST00000543511 MT1BP07438 61 aa4.68□□□□□ -1.66
DDX11-225ENST00000543511 KRTAP19-6Q3LI70 58 aa4.64□□□□□ -1.67
DDX11-225ENST00000543511 ATP5EP56381 51 aaPredicted RBP4.63□□□□□ -1.67
DDX11-225ENST00000543511 Q5VV11 94 aa4.63□□□□□ -1.67
DDX11-225ENST00000543511 TMEM258P61165 79 aa4.6□□□□□ -1.67
DDX11-225ENST00000543511 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
DDX11-225ENST00000543511 M0QZ58 72 aa4.59□□□□□ -1.67
DDX11-225ENST00000543511 R4GN34 69 aa4.59□□□□□ -1.67
DDX11-225ENST00000543511 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
DDX11-225ENST00000543511 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
DDX11-225ENST00000543511 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
DDX11-225ENST00000543511 LINC01554Q52M75 96 aa4.49□□□□□ -1.69
DDX11-225ENST00000543511 SERP1Q9Y6X1 66 aa4.49□□□□□ -1.69
DDX11-225ENST00000543511 A6NN06 94 aa4.48□□□□□ -1.69
DDX11-225ENST00000543511 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
DDX11-225ENST00000543511 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
DDX11-225ENST00000543511 PLAC4Q8WY50 150 aa4.46□□□□□ -1.7
DDX11-225ENST00000543511 A0A1B0GU69 56 aa4.44□□□□□ -1.7
DDX11-225ENST00000543511 MT1XP80297 61 aa4.44□□□□□ -1.7
DDX11-225ENST00000543511 A0A1B0GU33 70 aa4.43□□□□□ -1.7
DDX11-225ENST00000543511 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
DDX11-225ENST00000543511 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
DDX11-225ENST00000543511 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
DDX11-225ENST00000543511 A8MU10 97 aa4.38□□□□□ -1.71
DDX11-225ENST00000543511 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
DDX11-225ENST00000543511 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
DDX11-225ENST00000543511 A0A0D9SG42 100 aa4.35□□□□□ -1.71
DDX11-225ENST00000543511 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
DDX11-225ENST00000543511 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
DDX11-225ENST00000543511 SMIM26A0A096LP01 95 aa4.29□□□□□ -1.72
DDX11-225ENST00000543511 Q1T7F1 81 aa4.29□□□□□ -1.72
DDX11-225ENST00000543511 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
DDX11-225ENST00000543511 V9GYY9 64 aa4.27□□□□□ -1.73
DDX11-225ENST00000543511 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
DDX11-225ENST00000543511 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
DDX11-225ENST00000543511 UQCR11O14957 56 aa4.24□□□□□ -1.73
DDX11-225ENST00000543511 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
DDX11-225ENST00000543511 PSPHP1O15172 72 aa4.23□□□□□ -1.73
DDX11-225ENST00000543511 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms