RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
CIT-212ENST00000543239 FCGBPQ9Y6R7 5405 aaPredicted RBP7.44□□□□□ -1.22
CIT-212ENST00000543239 A8MUN3 132 aa7.44□□□□□ -1.22
CIT-212ENST00000543239 KLKP1Q107X0 134 aa7.43□□□□□ -1.22
CIT-212ENST00000543239 KRTAP19-6Q3LI70 58 aa7.43□□□□□ -1.22
CIT-212ENST00000543239 H3BPC8 53 aa7.42□□□□□ -1.22
CIT-212ENST00000543239 SCGB1A1P11684 91 aa7.41□□□□□ -1.22
CIT-212ENST00000543239 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
CIT-212ENST00000543239 NDUFC1O43677 76 aa7.38□□□□□ -1.23
CIT-212ENST00000543239 SPRR2GQ9BYE4 73 aa7.35□□□□□ -1.23
CIT-212ENST00000543239 H0YAA0 97 aa7.31□□□□□ -1.24
CIT-212ENST00000543239 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
CIT-212ENST00000543239 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
CIT-212ENST00000543239 SMIM20Q8N5G0 67 aa7.28□□□□□ -1.24
CIT-212ENST00000543239 KRTAP9-7A8MTY7 169 aa7.27□□□□□ -1.25
CIT-212ENST00000543239 Q5VV11 94 aa7.27□□□□□ -1.25
CIT-212ENST00000543239 DMAC1Q96GE9 116 aa7.26□□□□□ -1.25
CIT-212ENST00000543239 MT1BP07438 61 aa7.25□□□□□ -1.25
CIT-212ENST00000543239 TRAV7A0A075B6U4 112 aa7.24□□□□□ -1.25
CIT-212ENST00000543239 ADM2Q7Z4H4 148 aa7.18□□□□□ -1.26
CIT-212ENST00000543239 SERP2Q8N6R1 65 aa7.16□□□□□ -1.26
CIT-212ENST00000543239 ANAPC13Q9BS18 74 aa7.16□□□□□ -1.26
CIT-212ENST00000543239 MACF1Q9UPN3 7388 aaKnown RBP7.14□□□□□ -1.27
CIT-212ENST00000543239 A6NN06 94 aa7.12□□□□□ -1.27
CIT-212ENST00000543239 COX7CP15954 63 aa7.11□□□□□ -1.27
CIT-212ENST00000543239 ACYP2P14621 99 aa7.1□□□□□ -1.27
CIT-212ENST00000543239 C20orf197Q8N268 126 aa7.09□□□□□ -1.27
CIT-212ENST00000543239 KRTAP10-5P60370 271 aa7.07□□□□□ -1.28
CIT-212ENST00000543239 SNURFQ9Y675 71 aa7.05□□□□□ -1.28
CIT-212ENST00000543239 P0C880 135 aa7.04□□□□□ -1.28
CIT-212ENST00000543239 PCP4P48539 62 aa7.04□□□□□ -1.28
CIT-212ENST00000543239 SPTSSBQ8NFR3 76 aa7.02□□□□□ -1.29
CIT-212ENST00000543239 R4GN34 69 aa7.02□□□□□ -1.29
CIT-212ENST00000543239 KRTAP3-2Q9BYR7 98 aa7□□□□□ -1.29
CIT-212ENST00000543239 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
CIT-212ENST00000543239 SPANXA2-OT1Q8N9U9 137 aa6.99□□□□□ -1.29
CIT-212ENST00000543239 KRTAP6-3Q3LI67 103 aa6.98□□□□□ -1.29
CIT-212ENST00000543239 CCDC179H3BU77 68 aa6.97□□□□□ -1.29
CIT-212ENST00000543239 CHKB-CPT1BH3BT56 60 aa6.96□□□□□ -1.3
CIT-212ENST00000543239 M0QZ58 72 aa6.95□□□□□ -1.3
CIT-212ENST00000543239 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
CIT-212ENST00000543239 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
CIT-212ENST00000543239 H7BZZ5 65 aa6.84□□□□□ -1.31
CIT-212ENST00000543239 CYSTM1Q9H1C7 97 aa6.84□□□□□ -1.31
CIT-212ENST00000543239 MT1XP80297 61 aa6.83□□□□□ -1.32
CIT-212ENST00000543239 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
CIT-212ENST00000543239 TMEM258P61165 79 aa6.79□□□□□ -1.32
CIT-212ENST00000543239 ATP5EP56381 51 aaPredicted RBP6.76□□□□□ -1.33
CIT-212ENST00000543239 COA5Q86WW8 74 aa6.76□□□□□ -1.33
CIT-212ENST00000543239 KRTAP5-9P26371 169 aa6.72□□□□□ -1.33
CIT-212ENST00000543239 KRTAP12-2P59991 146 aa6.67□□□□□ -1.34
CIT-212ENST00000543239 MUC12Q9UKN1 5478 aa6.65□□□□□ -1.35
CIT-212ENST00000543239 SEC61GP60059 68 aa6.62□□□□□ -1.35
CIT-212ENST00000543239 KRTAP13-4Q3LI77 160 aa6.62□□□□□ -1.35
CIT-212ENST00000543239 KMT2DO14686 5537 aa6.6□□□□□ -1.35
CIT-212ENST00000543239 SERP1Q9Y6X1 66 aa6.6□□□□□ -1.35
CIT-212ENST00000543239 NEBP20929 6669 aa6.59□□□□□ -1.35
CIT-212ENST00000543239 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
CIT-212ENST00000543239 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
CIT-212ENST00000543239 SPRR2FQ96RM1 72 aa6.52□□□□□ -1.37
CIT-212ENST00000543239 MDN1Q9NU22 5596 aa6.52□□□□□ -1.37
CIT-212ENST00000543239 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
CIT-212ENST00000543239 KRTAP10-12P60413 245 aa6.5□□□□□ -1.37
CIT-212ENST00000543239 A0A1B0GU33 70 aa6.48□□□□□ -1.37
CIT-212ENST00000543239 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
CIT-212ENST00000543239 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
CIT-212ENST00000543239 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
CIT-212ENST00000543239 SPATA8Q6RVD6 105 aa6.44□□□□□ -1.38
CIT-212ENST00000543239 A0A0D9SG42 100 aa6.42□□□□□ -1.38
CIT-212ENST00000543239 A0A1B0GU69 56 aa6.42□□□□□ -1.38
CIT-212ENST00000543239 SMIM26A0A096LP01 95 aa6.39□□□□□ -1.39
CIT-212ENST00000543239 SPRR2EP22531 72 aa6.39□□□□□ -1.39
CIT-212ENST00000543239 SPRR2BP35325 72 aa6.39□□□□□ -1.39
CIT-212ENST00000543239 SPRR2AP35326 72 aa6.39□□□□□ -1.39
CIT-212ENST00000543239 KRTAP20-1Q3LI63 56 aa6.38□□□□□ -1.39
CIT-212ENST00000543239 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
CIT-212ENST00000543239 SPINT4Q6UDR6 99 aa6.33□□□□□ -1.4
CIT-212ENST00000543239 V9GYY9 64 aa6.33□□□□□ -1.4
CIT-212ENST00000543239 KRTAP12-1P59990 96 aa6.32□□□□□ -1.4
CIT-212ENST00000543239 Q1T7F1 81 aa6.3□□□□□ -1.4
CIT-212ENST00000543239 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
CIT-212ENST00000543239 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
CIT-212ENST00000543239 KRTAP2-3P0C7H8 128 aa6.26□□□□□ -1.41
CIT-212ENST00000543239 KRTAP2-4Q9BYR9 128 aa6.26□□□□□ -1.41
CIT-212ENST00000543239 A8MU10 97 aa6.22□□□□□ -1.41
CIT-212ENST00000543239 SPRR2DP22532 72 aa6.19□□□□□ -1.42
CIT-212ENST00000543239 PSPHP1O15172 72 aa6.11□□□□□ -1.43
CIT-212ENST00000543239 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
CIT-212ENST00000543239 UQCR11O14957 56 aa6.08□□□□□ -1.44
CIT-212ENST00000543239 KRTAP2-2Q9BYT5 123 aa6.07□□□□□ -1.44
CIT-212ENST00000543239 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
CIT-212ENST00000543239 MT1EP04732 61 aa6.05□□□□□ -1.44
CIT-212ENST00000543239 C10orf95Q9H7T3 257 aa6.02□□□□□ -1.45
CIT-212ENST00000543239 TNP1P09430 55 aa6□□□□□ -1.45
CIT-212ENST00000543239 LCE3BQ5TA77 95 aa6□□□□□ -1.45
CIT-212ENST00000543239 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
CIT-212ENST00000543239 KRTAP19-3Q7Z4W3 81 aa5.98□□□□□ -1.45
CIT-212ENST00000543239 KRTAP19-5Q3LI72 72 aa5.97□□□□□ -1.45
CIT-212ENST00000543239 A6NED7 52 aa5.96□□□□□ -1.46
CIT-212ENST00000543239 MIR22HGQ0VDD5 57 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms