RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 H7BZZ5 65 aa11.15□□□□□ -0.62
HOMER3-205ENST00000542541 CYSTM1Q9H1C7 97 aa11.14□□□□□ -0.63
HOMER3-205ENST00000542541 CSAG1Q6PB30 78 aa11.13□□□□□ -0.63
HOMER3-205ENST00000542541 LORP23490 312 aaPredicted RBP11.1□□□□□ -0.63
HOMER3-205ENST00000542541 KRTAP3-3Q9BYR6 98 aa11.06□□□□□ -0.64
HOMER3-205ENST00000542541 CHKB-CPT1BH3BT56 60 aa10.97□□□□□ -0.65
HOMER3-205ENST00000542541 KRTAP9-8Q9BYQ0 159 aa10.97□□□□□ -0.65
HOMER3-205ENST00000542541 SPTSSBQ8NFR3 76 aa10.91□□□□□ -0.66
HOMER3-205ENST00000542541 ATP5EP56381 51 aaPredicted RBP10.9□□□□□ -0.66
HOMER3-205ENST00000542541 MT2AP02795 61 aa10.88□□□□□ -0.67
HOMER3-205ENST00000542541 TMEM258P61165 79 aa10.87□□□□□ -0.67
HOMER3-205ENST00000542541 COA5Q86WW8 74 aa10.86□□□□□ -0.67
HOMER3-205ENST00000542541 KRTAP10-10P60014 251 aa10.83□□□□□ -0.68
HOMER3-205ENST00000542541 MT1FP04733 61 aa10.8□□□□□ -0.68
HOMER3-205ENST00000542541 H0YAA0 97 aa10.78□□□□□ -0.68
HOMER3-205ENST00000542541 KRTAP9-2Q9BYQ4 174 aa10.76□□□□□ -0.69
HOMER3-205ENST00000542541 LCE2DQ5TA82 110 aaPredicted RBP10.73□□□□□ -0.69
HOMER3-205ENST00000542541 ADM2Q7Z4H4 148 aa10.68□□□□□ -0.7
HOMER3-205ENST00000542541 KRTAP9-3Q9BYQ3 159 aa10.6□□□□□ -0.71
HOMER3-205ENST00000542541 CRIPTQ9P021 101 aa10.56□□□□□ -0.72
HOMER3-205ENST00000542541 SERP1Q9Y6X1 66 aa10.53□□□□□ -0.72
HOMER3-205ENST00000542541 KRTAP3-2Q9BYR7 98 aa10.52□□□□□ -0.73
HOMER3-205ENST00000542541 P0C880 135 aa10.5□□□□□ -0.73
HOMER3-205ENST00000542541 SEC61GP60059 68 aa10.48□□□□□ -0.73
HOMER3-205ENST00000542541 SPRR2GQ9BYE4 73 aa10.41□□□□□ -0.74
HOMER3-205ENST00000542541 KRTAP19-1Q8IUB9 90 aa10.4□□□□□ -0.75
HOMER3-205ENST00000542541 LCE2BO14633 110 aa10.38□□□□□ -0.75
HOMER3-205ENST00000542541 R4GN34 69 aa10.38□□□□□ -0.75
HOMER3-205ENST00000542541 FSIP2Q5CZC0 6907 aa10.38□□□□□ -0.75
HOMER3-205ENST00000542541 USH2AO75445 5202 aa10.34□□□□□ -0.75
HOMER3-205ENST00000542541 A0A1B0GU69 56 aa10.33□□□□□ -0.76
HOMER3-205ENST00000542541 M0QZ58 72 aa10.31□□□□□ -0.76
HOMER3-205ENST00000542541 LINC01558Q9Y6Z2 57 aa10.27□□□□□ -0.77
HOMER3-205ENST00000542541 RPS28P62857 69 aaKnown RBP10.26□□□□□ -0.77
HOMER3-205ENST00000542541 PRR15LQ9BU68 103 aa10.25□□□□□ -0.77
HOMER3-205ENST00000542541 CRCT1Q9UGL9 99 aa10.23□□□□□ -0.77
HOMER3-205ENST00000542541 KRTAP19-8Q3LI54 63 aa10.22□□□□□ -0.77
HOMER3-205ENST00000542541 KRTAP9-6A0A140TA67 174 aa10.22□□□□□ -0.77
HOMER3-205ENST00000542541 A0A1B0GU33 70 aa10.19□□□□□ -0.78
HOMER3-205ENST00000542541 Q5VV11 94 aa10.19□□□□□ -0.78
HOMER3-205ENST00000542541 SMIM26A0A096LP01 95 aa10.18□□□□□ -0.78
HOMER3-205ENST00000542541 V9GYY9 64 aa10.18□□□□□ -0.78
HOMER3-205ENST00000542541 SSPOA2VEC9 5147 aa10.16□□□□□ -0.78
HOMER3-205ENST00000542541 LINC01554Q52M75 96 aa10.12□□□□□ -0.79
HOMER3-205ENST00000542541 Q1T7F1 81 aa10.11□□□□□ -0.79
HOMER3-205ENST00000542541 MT1BP07438 61 aa10.09□□□□□ -0.79
HOMER3-205ENST00000542541 KRTAP13-4Q3LI77 160 aa10.07□□□□□ -0.8
HOMER3-205ENST00000542541 SPATA8Q6RVD6 105 aa10□□□□□ -0.81
HOMER3-205ENST00000542541 PLAC4Q8WY50 150 aa10□□□□□ -0.81
HOMER3-205ENST00000542541 A6NN06 94 aa9.96□□□□□ -0.82
HOMER3-205ENST00000542541 PSPHP1O15172 72 aa9.94□□□□□ -0.82
HOMER3-205ENST00000542541 KRTAP19-6Q3LI70 58 aa9.93□□□□□ -0.82
HOMER3-205ENST00000542541 UQCR11O14957 56 aa9.92□□□□□ -0.82
HOMER3-205ENST00000542541 A0A0D9SG42 100 aa9.89□□□□□ -0.83
HOMER3-205ENST00000542541 FCGBPQ9Y6R7 5405 aaPredicted RBP9.84□□□□□ -0.83
HOMER3-205ENST00000542541 A8MU10 97 aa9.76□□□□□ -0.85
HOMER3-205ENST00000542541 KRTAP10-5P60370 271 aa9.74□□□□□ -0.85
HOMER3-205ENST00000542541 MIR22HGQ0VDD5 57 aa9.74□□□□□ -0.85
HOMER3-205ENST00000542541 PRO2289Q9P1D8 64 aa9.73□□□□□ -0.85
HOMER3-205ENST00000542541 SPINT4Q6UDR6 99 aa9.72□□□□□ -0.85
HOMER3-205ENST00000542541 KRTAP12-1P59990 96 aa9.69□□□□□ -0.86
HOMER3-205ENST00000542541 A6NED7 52 aa9.67□□□□□ -0.86
HOMER3-205ENST00000542541 CAMK2N1Q7Z7J9 78 aa9.67□□□□□ -0.86
HOMER3-205ENST00000542541 MT1XP80297 61 aa9.64□□□□□ -0.87
HOMER3-205ENST00000542541 KRTAP12-2P59991 146 aa9.63□□□□□ -0.87
HOMER3-205ENST00000542541 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.53□□□□□ -0.88
HOMER3-205ENST00000542541 K7ERS5 55 aa9.48□□□□□ -0.89
HOMER3-205ENST00000542541 MACF1Q9UPN3 7388 aaKnown RBP9.45□□□□□ -0.9
HOMER3-205ENST00000542541 CDC42SE1Q9NRR8 79 aa9.41□□□□□ -0.9
HOMER3-205ENST00000542541 SYNE2Q8WXH0 6885 aaKnown RBP9.25□□□□□ -0.93
HOMER3-205ENST00000542541 KRTAP9-7A8MTY7 169 aa9.24□□□□□ -0.93
HOMER3-205ENST00000542541 KRTAP10-7P60409 375 aaPredicted RBP9.21□□□□□ -0.93
HOMER3-205ENST00000542541 C10orf95Q9H7T3 257 aa9.2□□□□□ -0.94
HOMER3-205ENST00000542541 KRTAP10-12P60413 245 aa9.18□□□□□ -0.94
HOMER3-205ENST00000542541 BRK1Q8WUW1 75 aa9.15□□□□□ -0.94
HOMER3-205ENST00000542541 TNP1P09430 55 aa9.1□□□□□ -0.95
HOMER3-205ENST00000542541 PRO0628Q9UI54 55 aa9.09□□□□□ -0.95
HOMER3-205ENST00000542541 KRTAP6-3Q3LI67 103 aa9.05□□□□□ -0.96
HOMER3-205ENST00000542541 KMT2DO14686 5537 aa9.04□□□□□ -0.96
HOMER3-205ENST00000542541 KRTAP4-8A0A0G2JLE6 195 aa8.99□□□□□ -0.97
HOMER3-205ENST00000542541 KRTAP4-8Q9BYQ9 185 aa8.99□□□□□ -0.97
HOMER3-205ENST00000542541 KRTAP8-1Q8IUC2 63 aa8.98□□□□□ -0.97
HOMER3-205ENST00000542541 KRTAP25-1Q3LHN0 102 aa8.94□□□□□ -0.98
HOMER3-205ENST00000542541 ROMO1P60602 79 aa8.92□□□□□ -0.98
HOMER3-205ENST00000542541 KRTAP5-9P26371 169 aa8.88□□□□□ -0.99
HOMER3-205ENST00000542541 SVIPQ8NHG7 77 aa8.85□□□□□ -0.99
HOMER3-205ENST00000542541 MUC12Q9UKN1 5478 aa8.77□□□□□ -1.01
HOMER3-205ENST00000542541 SPRR2FQ96RM1 72 aa8.76□□□□□ -1.01
HOMER3-205ENST00000542541 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
HOMER3-205ENST00000542541 PMAIP1Q13794 54 aa8.66□□□□□ -1.02
HOMER3-205ENST00000542541 KRTAP23-1A1A580 65 aa8.65□□□□□ -1.03
HOMER3-205ENST00000542541 NEBP20929 6669 aa8.64□□□□□ -1.03
HOMER3-205ENST00000542541 MDN1Q9NU22 5596 aa8.61□□□□□ -1.03
HOMER3-205ENST00000542541 KRTAP19-7Q3SYF9 63 aa8.6□□□□□ -1.03
HOMER3-205ENST00000542541 KRTAP19-5Q3LI72 72 aa8.59□□□□□ -1.03
HOMER3-205ENST00000542541 PP632Q6XCG6 107 aa8.52□□□□□ -1.05
HOMER3-205ENST00000542541 MT1EP04732 61 aa8.51□□□□□ -1.05
HOMER3-205ENST00000542541 SPRR2EP22531 72 aa8.47□□□□□ -1.05
HOMER3-205ENST00000542541 SPRR2BP35325 72 aa8.47□□□□□ -1.05
HOMER3-205ENST00000542541 SPRR2AP35326 72 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms