RNA–Protein interactions for RNA: ENST00000542411.5

CYB561A3-218, Transcript of cytochrome b561 family member A3, humanhuman

TSL 2

Gene CYB561A3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-218ENST00000542411 DMAC1Q96GE9 116 aa5.77□□□□□ -1.49
CYB561A3-218ENST00000542411 C4orf26Q17RF5 130 aa5.76□□□□□ -1.49
CYB561A3-218ENST00000542411 MPLKIPQ8TAP9 179 aa5.73□□□□□ -1.49
CYB561A3-218ENST00000542411 A8MUN3 132 aa5.71□□□□□ -1.5
CYB561A3-218ENST00000542411 KRTAP10-6P60371 365 aaPredicted RBP5.68□□□□□ -1.5
CYB561A3-218ENST00000542411 V9GYY9 64 aa5.66□□□□□ -1.5
CYB561A3-218ENST00000542411 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
CYB561A3-218ENST00000542411 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
CYB561A3-218ENST00000542411 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
CYB561A3-218ENST00000542411 SPTSSBQ8NFR3 76 aa5.63□□□□□ -1.51
CYB561A3-218ENST00000542411 Q1T7F1 81 aa5.61□□□□□ -1.51
CYB561A3-218ENST00000542411 H1FX-AS1Q4G0G2 97 aa5.61□□□□□ -1.51
CYB561A3-218ENST00000542411 KRTAP3-1Q9BYR8 98 aa5.6□□□□□ -1.51
CYB561A3-218ENST00000542411 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.51
CYB561A3-218ENST00000542411 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
CYB561A3-218ENST00000542411 PSPHP1O15172 72 aa5.57□□□□□ -1.52
CYB561A3-218ENST00000542411 LINC01558Q9Y6Z2 57 aa5.56□□□□□ -1.52
CYB561A3-218ENST00000542411 S4R3F8 94 aa5.55□□□□□ -1.52
CYB561A3-218ENST00000542411 A0A1B0GU69 56 aa5.52□□□□□ -1.53
CYB561A3-218ENST00000542411 SEC61GP60059 68 aa5.51□□□□□ -1.53
CYB561A3-218ENST00000542411 KRTAP9-8Q9BYQ0 159 aa5.51□□□□□ -1.53
CYB561A3-218ENST00000542411 KRTAP10-10P60014 251 aa5.48□□□□□ -1.53
CYB561A3-218ENST00000542411 LCA10Q71F78 164 aa5.48□□□□□ -1.53
CYB561A3-218ENST00000542411 Q5VV11 94 aa5.47□□□□□ -1.53
CYB561A3-218ENST00000542411 MT2AP02795 61 aa5.46□□□□□ -1.54
CYB561A3-218ENST00000542411 A6NED7 52 aa5.43□□□□□ -1.54
CYB561A3-218ENST00000542411 CSAG1Q6PB30 78 aa5.43□□□□□ -1.54
CYB561A3-218ENST00000542411 BRK1Q8WUW1 75 aa5.41□□□□□ -1.54
CYB561A3-218ENST00000542411 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.54
CYB561A3-218ENST00000542411 MT1FP04733 61 aa5.4□□□□□ -1.54
CYB561A3-218ENST00000542411 KRTAP3-3Q9BYR6 98 aa5.4□□□□□ -1.54
CYB561A3-218ENST00000542411 CRCT1Q9UGL9 99 aa5.38□□□□□ -1.55
CYB561A3-218ENST00000542411 UQCR11O14957 56 aa5.33□□□□□ -1.56
CYB561A3-218ENST00000542411 KRTAP9-3Q9BYQ3 159 aa5.33□□□□□ -1.56
CYB561A3-218ENST00000542411 A0A1B0GU33 70 aa5.3□□□□□ -1.56
CYB561A3-218ENST00000542411 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
CYB561A3-218ENST00000542411 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
CYB561A3-218ENST00000542411 CDC42SE1Q9NRR8 79 aa5.28□□□□□ -1.56
CYB561A3-218ENST00000542411 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
CYB561A3-218ENST00000542411 LCE2BO14633 110 aa5.25□□□□□ -1.57
CYB561A3-218ENST00000542411 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
CYB561A3-218ENST00000542411 KRTAP3-2Q9BYR7 98 aa5.23□□□□□ -1.57
CYB561A3-218ENST00000542411 FSIP2Q5CZC0 6907 aa5.23□□□□□ -1.57
CYB561A3-218ENST00000542411 A8MU10 97 aa5.22□□□□□ -1.57
CYB561A3-218ENST00000542411 P0C880 135 aa5.22□□□□□ -1.57
CYB561A3-218ENST00000542411 H0YAA0 97 aa5.21□□□□□ -1.58
CYB561A3-218ENST00000542411 CRIPTQ9P021 101 aa5.19□□□□□ -1.58
CYB561A3-218ENST00000542411 A0A0D9SG42 100 aa5.13□□□□□ -1.59
CYB561A3-218ENST00000542411 USH2AO75445 5202 aa5.13□□□□□ -1.59
CYB561A3-218ENST00000542411 KRTAP19-1Q8IUB9 90 aa5.12□□□□□ -1.59
CYB561A3-218ENST00000542411 SPRR2GQ9BYE4 73 aa5.12□□□□□ -1.59
CYB561A3-218ENST00000542411 K7ERS5 55 aa5.11□□□□□ -1.59
CYB561A3-218ENST00000542411 M0QZ58 72 aa5.11□□□□□ -1.59
CYB561A3-218ENST00000542411 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
CYB561A3-218ENST00000542411 R4GN34 69 aa5.11□□□□□ -1.59
CYB561A3-218ENST00000542411 PMAIP1Q13794 54 aa5.1□□□□□ -1.59
CYB561A3-218ENST00000542411 KRTAP19-6Q3LI70 58 aa5.08□□□□□ -1.6
CYB561A3-218ENST00000542411 LINC01554Q52M75 96 aa5.06□□□□□ -1.6
CYB561A3-218ENST00000542411 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
CYB561A3-218ENST00000542411 SSPOA2VEC9 5147 aa5.04□□□□□ -1.6
CYB561A3-218ENST00000542411 A6NN06 94 aa5.01□□□□□ -1.61
CYB561A3-218ENST00000542411 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
CYB561A3-218ENST00000542411 MT1BP07438 61 aa4.99□□□□□ -1.61
CYB561A3-218ENST00000542411 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.97□□□□□ -1.61
CYB561A3-218ENST00000542411 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.62
CYB561A3-218ENST00000542411 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
CYB561A3-218ENST00000542411 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
CYB561A3-218ENST00000542411 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
CYB561A3-218ENST00000542411 SVIPQ8NHG7 77 aa4.89□□□□□ -1.63
CYB561A3-218ENST00000542411 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
CYB561A3-218ENST00000542411 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
CYB561A3-218ENST00000542411 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
CYB561A3-218ENST00000542411 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
CYB561A3-218ENST00000542411 ROMO1P60602 79 aa4.84□□□□□ -1.63
CYB561A3-218ENST00000542411 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
CYB561A3-218ENST00000542411 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
CYB561A3-218ENST00000542411 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
CYB561A3-218ENST00000542411 MT1XP80297 61 aa4.73□□□□□ -1.65
CYB561A3-218ENST00000542411 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
CYB561A3-218ENST00000542411 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
CYB561A3-218ENST00000542411 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
CYB561A3-218ENST00000542411 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
CYB561A3-218ENST00000542411 TNP1P09430 55 aa4.57□□□□□ -1.68
CYB561A3-218ENST00000542411 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
CYB561A3-218ENST00000542411 KRTAP5-9P26371 169 aa4.55□□□□□ -1.68
CYB561A3-218ENST00000542411 KRTAP10-7P60409 375 aaPredicted RBP4.52□□□□□ -1.69
CYB561A3-218ENST00000542411 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
CYB561A3-218ENST00000542411 SPRR2FQ96RM1 72 aa4.5□□□□□ -1.69
CYB561A3-218ENST00000542411 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
CYB561A3-218ENST00000542411 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
CYB561A3-218ENST00000542411 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
CYB561A3-218ENST00000542411 KMT2DO14686 5537 aa4.41□□□□□ -1.7
CYB561A3-218ENST00000542411 SPRR2EP22531 72 aa4.4□□□□□ -1.71
CYB561A3-218ENST00000542411 SPRR2BP35325 72 aa4.4□□□□□ -1.71
CYB561A3-218ENST00000542411 SPRR2AP35326 72 aa4.4□□□□□ -1.71
CYB561A3-218ENST00000542411 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
CYB561A3-218ENST00000542411 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
CYB561A3-218ENST00000542411 NEBP20929 6669 aa4.36□□□□□ -1.71
CYB561A3-218ENST00000542411 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
CYB561A3-218ENST00000542411 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms