RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
SCNN1A-217ENST00000542260 Q5W150 140 aa7.2□□□□□ -1.26
SCNN1A-217ENST00000542260 KRTAP6-3Q3LI67 103 aa7.19□□□□□ -1.26
SCNN1A-217ENST00000542260 COX7CP15954 63 aa7.18□□□□□ -1.26
SCNN1A-217ENST00000542260 H3BPC8 53 aa7.17□□□□□ -1.26
SCNN1A-217ENST00000542260 LINC00208Q96KT6 92 aa7.15□□□□□ -1.26
SCNN1A-217ENST00000542260 LOC101927531A0A1B0GV80 90 aa7.14□□□□□ -1.27
SCNN1A-217ENST00000542260 C1orf64Q8NEQ6 169 aa7.13□□□□□ -1.27
SCNN1A-217ENST00000542260 C20orf197Q8N268 126 aa7.11□□□□□ -1.27
SCNN1A-217ENST00000542260 C4orf26Q17RF5 130 aa7.1□□□□□ -1.27
SCNN1A-217ENST00000542260 SNURFQ9Y675 71 aa7.07□□□□□ -1.28
SCNN1A-217ENST00000542260 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
SCNN1A-217ENST00000542260 KLKP1Q107X0 134 aa7.05□□□□□ -1.28
SCNN1A-217ENST00000542260 CCDC179H3BU77 68 aa7.04□□□□□ -1.28
SCNN1A-217ENST00000542260 A6NN06 94 aa7.03□□□□□ -1.28
SCNN1A-217ENST00000542260 PCP4P48539 62 aa7.03□□□□□ -1.28
SCNN1A-217ENST00000542260 S4R3F8 94 aa7.02□□□□□ -1.29
SCNN1A-217ENST00000542260 Q5VV11 94 aa7.01□□□□□ -1.29
SCNN1A-217ENST00000542260 NDUFC1O43677 76 aa7□□□□□ -1.29
SCNN1A-217ENST00000542260 CSAG1Q6PB30 78 aa6.99□□□□□ -1.29
SCNN1A-217ENST00000542260 NEBP20929 6669 aa6.95□□□□□ -1.3
SCNN1A-217ENST00000542260 MT1BP07438 61 aa6.95□□□□□ -1.3
SCNN1A-217ENST00000542260 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
SCNN1A-217ENST00000542260 LCA10Q71F78 164 aa6.94□□□□□ -1.3
SCNN1A-217ENST00000542260 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
SCNN1A-217ENST00000542260 KRTAP3-1Q9BYR8 98 aa6.93□□□□□ -1.3
SCNN1A-217ENST00000542260 H7BZZ5 65 aa6.91□□□□□ -1.3
SCNN1A-217ENST00000542260 CYSTM1Q9H1C7 97 aa6.91□□□□□ -1.3
SCNN1A-217ENST00000542260 MUC12Q9UKN1 5478 aa6.9□□□□□ -1.31
SCNN1A-217ENST00000542260 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
SCNN1A-217ENST00000542260 KRTAP10-5P60370 271 aa6.87□□□□□ -1.31
SCNN1A-217ENST00000542260 A8MUN3 132 aa6.84□□□□□ -1.31
SCNN1A-217ENST00000542260 TMEM258P61165 79 aa6.84□□□□□ -1.31
SCNN1A-217ENST00000542260 ATP5EP56381 51 aaPredicted RBP6.82□□□□□ -1.32
SCNN1A-217ENST00000542260 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
SCNN1A-217ENST00000542260 CRIPTQ9P021 101 aa6.81□□□□□ -1.32
SCNN1A-217ENST00000542260 ACYP2P14621 99 aa6.79□□□□□ -1.32
SCNN1A-217ENST00000542260 KRTAP5-9P26371 169 aa6.78□□□□□ -1.32
SCNN1A-217ENST00000542260 KRTAP20-1Q3LI63 56 aa6.78□□□□□ -1.32
SCNN1A-217ENST00000542260 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
SCNN1A-217ENST00000542260 CHKB-CPT1BH3BT56 60 aa6.7□□□□□ -1.34
SCNN1A-217ENST00000542260 COA5Q86WW8 74 aa6.68□□□□□ -1.34
SCNN1A-217ENST00000542260 MDN1Q9NU22 5596 aa6.67□□□□□ -1.34
SCNN1A-217ENST00000542260 KMT2DO14686 5537 aa6.66□□□□□ -1.34
SCNN1A-217ENST00000542260 H0YAA0 97 aa6.65□□□□□ -1.34
SCNN1A-217ENST00000542260 SPTSSBQ8NFR3 76 aa6.63□□□□□ -1.35
SCNN1A-217ENST00000542260 SERP1Q9Y6X1 66 aa6.63□□□□□ -1.35
SCNN1A-217ENST00000542260 PRO2289Q9P1D8 64 aa6.6□□□□□ -1.35
SCNN1A-217ENST00000542260 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
SCNN1A-217ENST00000542260 KRTAP2-3P0C7H8 128 aa6.54□□□□□ -1.36
SCNN1A-217ENST00000542260 KRTAP2-4Q9BYR9 128 aa6.54□□□□□ -1.36
SCNN1A-217ENST00000542260 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
SCNN1A-217ENST00000542260 RPS28P62857 69 aaKnown RBP6.51□□□□□ -1.37
SCNN1A-217ENST00000542260 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
SCNN1A-217ENST00000542260 SPRR2EP22531 72 aa6.49□□□□□ -1.37
SCNN1A-217ENST00000542260 SPRR2BP35325 72 aa6.49□□□□□ -1.37
SCNN1A-217ENST00000542260 SPRR2AP35326 72 aa6.49□□□□□ -1.37
SCNN1A-217ENST00000542260 MT1XP80297 61 aa6.47□□□□□ -1.37
SCNN1A-217ENST00000542260 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
SCNN1A-217ENST00000542260 R4GN34 69 aa6.44□□□□□ -1.38
SCNN1A-217ENST00000542260 SMIM26A0A096LP01 95 aa6.43□□□□□ -1.38
SCNN1A-217ENST00000542260 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
SCNN1A-217ENST00000542260 SEC61GP60059 68 aa6.4□□□□□ -1.38
SCNN1A-217ENST00000542260 V9GYY9 64 aa6.38□□□□□ -1.39
SCNN1A-217ENST00000542260 M0QZ58 72 aa6.36□□□□□ -1.39
SCNN1A-217ENST00000542260 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
SCNN1A-217ENST00000542260 A0A1B0GU69 56 aa6.35□□□□□ -1.39
SCNN1A-217ENST00000542260 LCE1AQ5T7P2 110 aa6.35□□□□□ -1.39
SCNN1A-217ENST00000542260 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
SCNN1A-217ENST00000542260 P0C880 135 aa6.33□□□□□ -1.4
SCNN1A-217ENST00000542260 Q1T7F1 81 aa6.33□□□□□ -1.4
SCNN1A-217ENST00000542260 KRTAP2-2Q9BYT5 123 aa6.33□□□□□ -1.4
SCNN1A-217ENST00000542260 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
SCNN1A-217ENST00000542260 SPRR2DP22532 72 aa6.29□□□□□ -1.4
SCNN1A-217ENST00000542260 LINC01554Q52M75 96 aa6.27□□□□□ -1.41
SCNN1A-217ENST00000542260 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.41
SCNN1A-217ENST00000542260 KRTAP4-8A0A0G2JLE6 195 aa6.24□□□□□ -1.41
SCNN1A-217ENST00000542260 KRTAP4-8Q9BYQ9 185 aa6.24□□□□□ -1.41
SCNN1A-217ENST00000542260 PSPHP1O15172 72 aa6.22□□□□□ -1.41
SCNN1A-217ENST00000542260 A0A1B0GU33 70 aa6.2□□□□□ -1.42
SCNN1A-217ENST00000542260 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
SCNN1A-217ENST00000542260 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
SCNN1A-217ENST00000542260 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
SCNN1A-217ENST00000542260 UQCR11O14957 56 aa6.12□□□□□ -1.43
SCNN1A-217ENST00000542260 A6NED7 52 aa6.07□□□□□ -1.44
SCNN1A-217ENST00000542260 SPATA8Q6RVD6 105 aa6.06□□□□□ -1.44
SCNN1A-217ENST00000542260 KRTAP13-4Q3LI77 160 aa6.05□□□□□ -1.44
SCNN1A-217ENST00000542260 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
SCNN1A-217ENST00000542260 A0A0D9SG42 100 aa5.98□□□□□ -1.45
SCNN1A-217ENST00000542260 A8MU10 97 aa5.94□□□□□ -1.46
SCNN1A-217ENST00000542260 CDC42SE1Q9NRR8 79 aa5.92□□□□□ -1.46
SCNN1A-217ENST00000542260 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.46
SCNN1A-217ENST00000542260 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
SCNN1A-217ENST00000542260 SPINT4Q6UDR6 99 aa5.88□□□□□ -1.47
SCNN1A-217ENST00000542260 K7ERS5 55 aa5.86□□□□□ -1.47
SCNN1A-217ENST00000542260 BRK1Q8WUW1 75 aa5.85□□□□□ -1.47
SCNN1A-217ENST00000542260 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
SCNN1A-217ENST00000542260 LCE5AQ5TCM9 118 aa5.81□□□□□ -1.48
SCNN1A-217ENST00000542260 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
SCNN1A-217ENST00000542260 KRTAP19-3Q7Z4W3 81 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms