RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 NDUFB1O75438 58 aa7.35□□□□□ -1.23
RTN3-211ENST00000542238 K7EQZ3 153 aa7.34□□□□□ -1.23
RTN3-211ENST00000542238 HCG22E2RYF7 251 aa7.33□□□□□ -1.24
RTN3-211ENST00000542238 PRR15Q8IV56 129 aa7.32□□□□□ -1.24
RTN3-211ENST00000542238 C8orf17Q9NRJ1 99 aa7.26□□□□□ -1.25
RTN3-211ENST00000542238 hDV103S1A0JD37 113 aa7.25□□□□□ -1.25
RTN3-211ENST00000542238 CYP4F30PQ9H0H9 118 aa7.25□□□□□ -1.25
RTN3-211ENST00000542238 H3BPC8 53 aa7.24□□□□□ -1.25
RTN3-211ENST00000542238 H1FX-AS1Q4G0G2 97 aa7.24□□□□□ -1.25
RTN3-211ENST00000542238 MMP24-AS1A0A0U1RRL7 71 aa7.22□□□□□ -1.25
RTN3-211ENST00000542238 MP68P56378 58 aa7.22□□□□□ -1.25
RTN3-211ENST00000542238 PRO0628Q9UI54 55 aa7.22□□□□□ -1.25
RTN3-211ENST00000542238 CASC2Q6XLA1 102 aa7.19□□□□□ -1.26
RTN3-211ENST00000542238 TRAV22A0A0B4J277 110 aa7.18□□□□□ -1.26
RTN3-211ENST00000542238 C1orf64Q8NEQ6 169 aa7.17□□□□□ -1.26
RTN3-211ENST00000542238 MRPL34Q9BQ48 92 aaKnown RBP7.17□□□□□ -1.26
RTN3-211ENST00000542238 SPANXA2-OT1Q8N9U9 137 aa7.16□□□□□ -1.26
RTN3-211ENST00000542238 NEBP20929 6669 aa7.16□□□□□ -1.26
RTN3-211ENST00000542238 H0Y9P7 68 aa7.15□□□□□ -1.26
RTN3-211ENST00000542238 Q1T7F1 81 aa7.15□□□□□ -1.26
RTN3-211ENST00000542238 LINC00208Q96KT6 92 aa7.12□□□□□ -1.27
RTN3-211ENST00000542238 NDUFS5O43920 106 aa7.1□□□□□ -1.27
RTN3-211ENST00000542238 A6NN06 94 aa7.09□□□□□ -1.27
RTN3-211ENST00000542238 V9GYY9 64 aa7.09□□□□□ -1.27
RTN3-211ENST00000542238 IGKV2D-30A0A075B6S6 120 aa7.08□□□□□ -1.28
RTN3-211ENST00000542238 IGKV2-30P06310 120 aa7.08□□□□□ -1.28
RTN3-211ENST00000542238 TP53AIP1Q9HCN2 124 aa7.07□□□□□ -1.28
RTN3-211ENST00000542238 C7orf65Q6ZTY9 151 aa7.06□□□□□ -1.28
RTN3-211ENST00000542238 BRK1Q8WUW1 75 aa7.05□□□□□ -1.28
RTN3-211ENST00000542238 KRTAP20-1Q3LI63 56 aa7.02□□□□□ -1.29
RTN3-211ENST00000542238 MUC12Q9UKN1 5478 aa7.01□□□□□ -1.29
RTN3-211ENST00000542238 Q5VV11 94 aa7.01□□□□□ -1.29
RTN3-211ENST00000542238 Q5W150 140 aa6.99□□□□□ -1.29
RTN3-211ENST00000542238 MT1BP07438 61 aa6.98□□□□□ -1.29
RTN3-211ENST00000542238 COA5Q86WW8 74 aa6.95□□□□□ -1.3
RTN3-211ENST00000542238 A8MUN3 132 aa6.93□□□□□ -1.3
RTN3-211ENST00000542238 PSPHP1O15172 72 aa6.93□□□□□ -1.3
RTN3-211ENST00000542238 KRTAP19-8Q3LI54 63 aa6.93□□□□□ -1.3
RTN3-211ENST00000542238 SPRR2GQ9BYE4 73 aa6.92□□□□□ -1.3
RTN3-211ENST00000542238 KRTAP10-5P60370 271 aa6.91□□□□□ -1.3
RTN3-211ENST00000542238 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
RTN3-211ENST00000542238 LOC101927531A0A1B0GV80 90 aa6.9□□□□□ -1.3
RTN3-211ENST00000542238 S4R3F8 94 aa6.9□□□□□ -1.3
RTN3-211ENST00000542238 KRTAP5-9P26371 169 aa6.89□□□□□ -1.31
RTN3-211ENST00000542238 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
RTN3-211ENST00000542238 LINC01558Q9Y6Z2 57 aa6.86□□□□□ -1.31
RTN3-211ENST00000542238 LCA10Q71F78 164 aa6.83□□□□□ -1.32
RTN3-211ENST00000542238 KRTAP3-1Q9BYR8 98 aa6.83□□□□□ -1.32
RTN3-211ENST00000542238 CHKB-CPT1BH3BT56 60 aa6.82□□□□□ -1.32
RTN3-211ENST00000542238 KMT2DO14686 5537 aa6.82□□□□□ -1.32
RTN3-211ENST00000542238 MDN1Q9NU22 5596 aa6.79□□□□□ -1.32
RTN3-211ENST00000542238 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
RTN3-211ENST00000542238 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
RTN3-211ENST00000542238 A6NED7 52 aa6.74□□□□□ -1.33
RTN3-211ENST00000542238 PMAIP1Q13794 54 aa6.74□□□□□ -1.33
RTN3-211ENST00000542238 ACYP2P14621 99 aa6.73□□□□□ -1.33
RTN3-211ENST00000542238 DMAC1Q96GE9 116 aa6.73□□□□□ -1.33
RTN3-211ENST00000542238 CDC42SE1Q9NRR8 79 aa6.73□□□□□ -1.33
RTN3-211ENST00000542238 CRIPTQ9P021 101 aa6.72□□□□□ -1.33
RTN3-211ENST00000542238 A8MU10 97 aa6.7□□□□□ -1.34
RTN3-211ENST00000542238 KRTAP3-3Q9BYR6 98 aa6.67□□□□□ -1.34
RTN3-211ENST00000542238 SPRR2FQ96RM1 72 aa6.64□□□□□ -1.35
RTN3-211ENST00000542238 SPRR2EP22531 72 aa6.62□□□□□ -1.35
RTN3-211ENST00000542238 SPRR2BP35325 72 aa6.62□□□□□ -1.35
RTN3-211ENST00000542238 SPRR2AP35326 72 aa6.62□□□□□ -1.35
RTN3-211ENST00000542238 KTN1-AS1Q86SY8 53 aa6.62□□□□□ -1.35
RTN3-211ENST00000542238 SPTSSBQ8NFR3 76 aa6.61□□□□□ -1.35
RTN3-211ENST00000542238 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
RTN3-211ENST00000542238 SEC61GP60059 68 aa6.56□□□□□ -1.36
RTN3-211ENST00000542238 A0A1B0GU69 56 aa6.52□□□□□ -1.37
RTN3-211ENST00000542238 H0YAA0 97 aa6.51□□□□□ -1.37
RTN3-211ENST00000542238 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
RTN3-211ENST00000542238 KRTAP2-2Q9BYT5 123 aa6.51□□□□□ -1.37
RTN3-211ENST00000542238 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
RTN3-211ENST00000542238 SPATA8Q6RVD6 105 aa6.5□□□□□ -1.37
RTN3-211ENST00000542238 MT1XP80297 61 aa6.46□□□□□ -1.38
RTN3-211ENST00000542238 LCE1AQ5T7P2 110 aa6.46□□□□□ -1.38
RTN3-211ENST00000542238 PLAC4Q8WY50 150 aa6.46□□□□□ -1.38
RTN3-211ENST00000542238 ADM2Q7Z4H4 148 aa6.44□□□□□ -1.38
RTN3-211ENST00000542238 UQCR11O14957 56 aa6.43□□□□□ -1.38
RTN3-211ENST00000542238 KRTAP3-2Q9BYR7 98 aa6.43□□□□□ -1.38
RTN3-211ENST00000542238 SPRR2DP22532 72 aa6.41□□□□□ -1.38
RTN3-211ENST00000542238 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
RTN3-211ENST00000542238 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
RTN3-211ENST00000542238 R4GN34 69 aa6.33□□□□□ -1.4
RTN3-211ENST00000542238 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
RTN3-211ENST00000542238 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
RTN3-211ENST00000542238 LCE3BQ5TA77 95 aa6.26□□□□□ -1.41
RTN3-211ENST00000542238 M0QZ58 72 aa6.25□□□□□ -1.41
RTN3-211ENST00000542238 P0C880 135 aa6.22□□□□□ -1.41
RTN3-211ENST00000542238 PRAC1Q96KF2 57 aa6.22□□□□□ -1.41
RTN3-211ENST00000542238 LINC01554Q52M75 96 aa6.19□□□□□ -1.42
RTN3-211ENST00000542238 A0A1B0GU33 70 aa6.17□□□□□ -1.42
RTN3-211ENST00000542238 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
RTN3-211ENST00000542238 KRTAP10-12P60413 245 aa6.15□□□□□ -1.42
RTN3-211ENST00000542238 GPR98Q8WXG9 6306 aa6.06□□□□□ -1.44
RTN3-211ENST00000542238 K7ERS5 55 aa6.02□□□□□ -1.45
RTN3-211ENST00000542238 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
RTN3-211ENST00000542238 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
RTN3-211ENST00000542238 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms