RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
GTDC1-219ENST00000542155 S4R3F8 94 aa8.41□□□□□ -1.06
GTDC1-219ENST00000542155 MT1HP80294 61 aa8.39□□□□□ -1.07
GTDC1-219ENST00000542155 CHKB-CPT1BH3BT56 60 aa8.33□□□□□ -1.08
GTDC1-219ENST00000542155 SERP1Q9Y6X1 66 aa8.32□□□□□ -1.08
GTDC1-219ENST00000542155 CSAG1Q6PB30 78 aa8.23□□□□□ -1.09
GTDC1-219ENST00000542155 M0R2T5 61 aa8.23□□□□□ -1.09
GTDC1-219ENST00000542155 LCE2AQ5TA79 106 aaPredicted RBP8.22□□□□□ -1.09
GTDC1-219ENST00000542155 RPS28P62857 69 aaKnown RBP8.19□□□□□ -1.1
GTDC1-219ENST00000542155 SPTSSBQ8NFR3 76 aa8.15□□□□□ -1.1
GTDC1-219ENST00000542155 KRTAP10-6P60371 365 aaPredicted RBP8.1□□□□□ -1.11
GTDC1-219ENST00000542155 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
GTDC1-219ENST00000542155 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
GTDC1-219ENST00000542155 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
GTDC1-219ENST00000542155 SMIM26A0A096LP01 95 aa8.06□□□□□ -1.12
GTDC1-219ENST00000542155 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
GTDC1-219ENST00000542155 P0C880 135 aa8.02□□□□□ -1.13
GTDC1-219ENST00000542155 LINC01558Q9Y6Z2 57 aa8.02□□□□□ -1.13
GTDC1-219ENST00000542155 H0YAA0 97 aa8□□□□□ -1.13
GTDC1-219ENST00000542155 MT2AP02795 61 aa8□□□□□ -1.13
GTDC1-219ENST00000542155 Q1T7F1 81 aa7.98□□□□□ -1.13
GTDC1-219ENST00000542155 MT1FP04733 61 aa7.97□□□□□ -1.13
GTDC1-219ENST00000542155 A0A1B0GU69 56 aa7.95□□□□□ -1.14
GTDC1-219ENST00000542155 PSPHP1O15172 72 aa7.92□□□□□ -1.14
GTDC1-219ENST00000542155 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
GTDC1-219ENST00000542155 SEC61GP60059 68 aa7.9□□□□□ -1.14
GTDC1-219ENST00000542155 KRTAP10-10P60014 251 aa7.9□□□□□ -1.15
GTDC1-219ENST00000542155 V9GYY9 64 aa7.88□□□□□ -1.15
GTDC1-219ENST00000542155 Q5VV11 94 aa7.84□□□□□ -1.16
GTDC1-219ENST00000542155 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
GTDC1-219ENST00000542155 A0A1B0GU33 70 aa7.79□□□□□ -1.16
GTDC1-219ENST00000542155 KRTAP9-3Q9BYQ3 159 aa7.77□□□□□ -1.16
GTDC1-219ENST00000542155 SPATA8Q6RVD6 105 aa7.76□□□□□ -1.17
GTDC1-219ENST00000542155 KRTAP19-1Q8IUB9 90 aa7.75□□□□□ -1.17
GTDC1-219ENST00000542155 M0QZ58 72 aa7.74□□□□□ -1.17
GTDC1-219ENST00000542155 R4GN34 69 aa7.74□□□□□ -1.17
GTDC1-219ENST00000542155 CRIPTQ9P021 101 aa7.7□□□□□ -1.18
GTDC1-219ENST00000542155 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
GTDC1-219ENST00000542155 UQCR11O14957 56 aa7.65□□□□□ -1.18
GTDC1-219ENST00000542155 LINC01554Q52M75 96 aa7.64□□□□□ -1.19
GTDC1-219ENST00000542155 LCE2BO14633 110 aa7.63□□□□□ -1.19
GTDC1-219ENST00000542155 A8MU10 97 aa7.63□□□□□ -1.19
GTDC1-219ENST00000542155 A6NED7 52 aa7.61□□□□□ -1.19
GTDC1-219ENST00000542155 A0A0D9SG42 100 aa7.6□□□□□ -1.19
GTDC1-219ENST00000542155 MIR22HGQ0VDD5 57 aa7.57□□□□□ -1.2
GTDC1-219ENST00000542155 KRTAP19-8Q3LI54 63 aa7.52□□□□□ -1.21
GTDC1-219ENST00000542155 MT1BP07438 61 aa7.5□□□□□ -1.21
GTDC1-219ENST00000542155 USH2AO75445 5202 aa7.5□□□□□ -1.21
GTDC1-219ENST00000542155 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
GTDC1-219ENST00000542155 KRTAP12-1P59990 96 aa7.45□□□□□ -1.22
GTDC1-219ENST00000542155 FSIP2Q5CZC0 6907 aa7.45□□□□□ -1.22
GTDC1-219ENST00000542155 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
GTDC1-219ENST00000542155 CDC42SE1Q9NRR8 79 aa7.44□□□□□ -1.22
GTDC1-219ENST00000542155 SPINT4Q6UDR6 99 aa7.41□□□□□ -1.22
GTDC1-219ENST00000542155 A6NN06 94 aa7.39□□□□□ -1.23
GTDC1-219ENST00000542155 BRK1Q8WUW1 75 aa7.39□□□□□ -1.23
GTDC1-219ENST00000542155 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
GTDC1-219ENST00000542155 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
GTDC1-219ENST00000542155 SSPOA2VEC9 5147 aa7.3□□□□□ -1.24
GTDC1-219ENST00000542155 CAMK2N1Q7Z7J9 78 aa7.21□□□□□ -1.26
GTDC1-219ENST00000542155 MT1XP80297 61 aa7.2□□□□□ -1.26
GTDC1-219ENST00000542155 KRTAP10-5P60370 271 aa7.19□□□□□ -1.26
GTDC1-219ENST00000542155 K7ERS5 55 aa7.17□□□□□ -1.26
GTDC1-219ENST00000542155 KRTAP19-6Q3LI70 58 aa7.14□□□□□ -1.27
GTDC1-219ENST00000542155 C10orf95Q9H7T3 257 aa7.09□□□□□ -1.27
GTDC1-219ENST00000542155 PRO0628Q9UI54 55 aa7.07□□□□□ -1.28
GTDC1-219ENST00000542155 CRCT1Q9UGL9 99 aa7.05□□□□□ -1.28
GTDC1-219ENST00000542155 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
GTDC1-219ENST00000542155 PRO2289Q9P1D8 64 aa7.01□□□□□ -1.29
GTDC1-219ENST00000542155 PMAIP1Q13794 54 aa6.96□□□□□ -1.29
GTDC1-219ENST00000542155 KRTAP10-7P60409 375 aaPredicted RBP6.93□□□□□ -1.3
GTDC1-219ENST00000542155 ROMO1P60602 79 aa6.92□□□□□ -1.3
GTDC1-219ENST00000542155 KMT2DO14686 5537 aa6.85□□□□□ -1.31
GTDC1-219ENST00000542155 KRTAP9-6A0A140TA67 174 aa6.84□□□□□ -1.31
GTDC1-219ENST00000542155 TNP1P09430 55 aa6.81□□□□□ -1.32
GTDC1-219ENST00000542155 KRTAP10-12P60413 245 aa6.8□□□□□ -1.32
GTDC1-219ENST00000542155 MACF1Q9UPN3 7388 aaKnown RBP6.75□□□□□ -1.33
GTDC1-219ENST00000542155 KRTAP4-8A0A0G2JLE6 195 aa6.75□□□□□ -1.33
GTDC1-219ENST00000542155 KRTAP4-8Q9BYQ9 185 aa6.75□□□□□ -1.33
GTDC1-219ENST00000542155 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
GTDC1-219ENST00000542155 LCE3AQ5TA76 89 aa6.65□□□□□ -1.34
GTDC1-219ENST00000542155 PRAC1Q96KF2 57 aa6.63□□□□□ -1.35
GTDC1-219ENST00000542155 SYNE2Q8WXH0 6885 aaKnown RBP6.61□□□□□ -1.35
GTDC1-219ENST00000542155 KTN1-AS1Q86SY8 53 aa6.57□□□□□ -1.36
GTDC1-219ENST00000542155 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
GTDC1-219ENST00000542155 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
GTDC1-219ENST00000542155 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
GTDC1-219ENST00000542155 KRTAP19-5Q3LI72 72 aa6.45□□□□□ -1.38
GTDC1-219ENST00000542155 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
GTDC1-219ENST00000542155 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
GTDC1-219ENST00000542155 MUC12Q9UKN1 5478 aa6.35□□□□□ -1.39
GTDC1-219ENST00000542155 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
GTDC1-219ENST00000542155 SPRR2FQ96RM1 72 aa6.34□□□□□ -1.39
GTDC1-219ENST00000542155 KRTAP5-9P26371 169 aa6.32□□□□□ -1.4
GTDC1-219ENST00000542155 MT1EP04732 61 aa6.31□□□□□ -1.4
GTDC1-219ENST00000542155 KRTAP6-3Q3LI67 103 aa6.29□□□□□ -1.4
GTDC1-219ENST00000542155 KRTAP9-7A8MTY7 169 aa6.24□□□□□ -1.41
GTDC1-219ENST00000542155 SVIPQ8NHG7 77 aa6.22□□□□□ -1.41
GTDC1-219ENST00000542155 MDN1Q9NU22 5596 aa6.2□□□□□ -1.42
GTDC1-219ENST00000542155 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms