RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 Q5VV11 94 aa9.18□□□□□ -0.94
GABARAPL1-210ENST00000541960 PRR15LQ9BU68 103 aa9.18□□□□□ -0.94
GABARAPL1-210ENST00000541960 J3QL48 77 aa9.14□□□□□ -0.95
GABARAPL1-210ENST00000541960 SPTSSBQ8NFR3 76 aa9.14□□□□□ -0.95
GABARAPL1-210ENST00000541960 COX6B2Q6YFQ2 88 aa9.11□□□□□ -0.95
GABARAPL1-210ENST00000541960 A8MU10 97 aa9.08□□□□□ -0.96
GABARAPL1-210ENST00000541960 PCLOQ9Y6V0 5065 aa9.05□□□□□ -0.96
GABARAPL1-210ENST00000541960 LCA10Q71F78 164 aa9.03□□□□□ -0.96
GABARAPL1-210ENST00000541960 HERC1Q15751 4861 aa8.95□□□□□ -0.98
GABARAPL1-210ENST00000541960 A0A1B0GU69 56 aa8.95□□□□□ -0.98
GABARAPL1-210ENST00000541960 A6NED7 52 aa8.92□□□□□ -0.98
GABARAPL1-210ENST00000541960 LINC01554Q52M75 96 aa8.92□□□□□ -0.98
GABARAPL1-210ENST00000541960 MUC17Q685J3 4493 aa8.9□□□□□ -0.99
GABARAPL1-210ENST00000541960 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
GABARAPL1-210ENST00000541960 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
GABARAPL1-210ENST00000541960 PRAC1Q96KF2 57 aa8.84□□□□□ -0.99
GABARAPL1-210ENST00000541960 KRTAP4-1Q9BYQ7 146 aa8.84□□□□□ -0.99
GABARAPL1-210ENST00000541960 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
GABARAPL1-210ENST00000541960 S4R3F8 94 aa8.81□□□□□ -1
GABARAPL1-210ENST00000541960 H1FX-AS1Q4G0G2 97 aa8.81□□□□□ -1
GABARAPL1-210ENST00000541960 CDC42SE1Q9NRR8 79 aa8.79□□□□□ -1
GABARAPL1-210ENST00000541960 A6NN06 94 aa8.78□□□□□ -1
GABARAPL1-210ENST00000541960 MUC2Q02817 5179 aa8.73□□□□□ -1.01
GABARAPL1-210ENST00000541960 UQCR11O14957 56 aa8.71□□□□□ -1.02
GABARAPL1-210ENST00000541960 SPATA8Q6RVD6 105 aa8.68□□□□□ -1.02
GABARAPL1-210ENST00000541960 MIR22HGQ0VDD5 57 aa8.66□□□□□ -1.02
GABARAPL1-210ENST00000541960 ADM2Q7Z4H4 148 aa8.64□□□□□ -1.03
GABARAPL1-210ENST00000541960 KRTAP10-6P60371 365 aaPredicted RBP8.63□□□□□ -1.03
GABARAPL1-210ENST00000541960 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
GABARAPL1-210ENST00000541960 KRTAP19-2Q3LHN2 52 aa8.63□□□□□ -1.03
GABARAPL1-210ENST00000541960 A0A1B0GU33 70 aa8.62□□□□□ -1.03
GABARAPL1-210ENST00000541960 H0YAA0 97 aa8.6□□□□□ -1.03
GABARAPL1-210ENST00000541960 CSAG1Q6PB30 78 aa8.56□□□□□ -1.04
GABARAPL1-210ENST00000541960 P0C880 135 aa8.54□□□□□ -1.04
GABARAPL1-210ENST00000541960 FLGP20930 4061 aaPredicted RBP8.49□□□□□ -1.05
GABARAPL1-210ENST00000541960 KRTAP13-4Q3LI77 160 aa8.48□□□□□ -1.05
GABARAPL1-210ENST00000541960 UBR4Q5T4S7 5183 aa8.46□□□□□ -1.05
GABARAPL1-210ENST00000541960 RNF213Q63HN8 5207 aa8.4□□□□□ -1.06
GABARAPL1-210ENST00000541960 FAT4Q6V0I7 4981 aa8.34□□□□□ -1.08
GABARAPL1-210ENST00000541960 LCE2CQ5TA81 110 aa8.31□□□□□ -1.08
GABARAPL1-210ENST00000541960 A0A0D9SG42 100 aa8.3□□□□□ -1.08
GABARAPL1-210ENST00000541960 ROMO1P60602 79 aa8.26□□□□□ -1.09
GABARAPL1-210ENST00000541960 LORP23490 312 aaPredicted RBP8.24□□□□□ -1.09
GABARAPL1-210ENST00000541960 M0QZ58 72 aa8.2□□□□□ -1.1
GABARAPL1-210ENST00000541960 KRTAP12-2P59991 146 aa8.14□□□□□ -1.11
GABARAPL1-210ENST00000541960 LUZP6Q538Z0 58 aa8.13□□□□□ -1.11
GABARAPL1-210ENST00000541960 R4GN34 69 aa8.13□□□□□ -1.11
GABARAPL1-210ENST00000541960 K7ERS5 55 aa8.12□□□□□ -1.11
GABARAPL1-210ENST00000541960 KRTAP12-1P59990 96 aa8.1□□□□□ -1.11
GABARAPL1-210ENST00000541960 MT1HP80294 61 aa8.1□□□□□ -1.11
GABARAPL1-210ENST00000541960 SPINT4Q6UDR6 99 aa8.05□□□□□ -1.12
GABARAPL1-210ENST00000541960 NDUFAF8A1L188 74 aa8.03□□□□□ -1.12
GABARAPL1-210ENST00000541960 M0R2T5 61 aa7.99□□□□□ -1.13
GABARAPL1-210ENST00000541960 CRIPTQ9P021 101 aa7.88□□□□□ -1.15
GABARAPL1-210ENST00000541960 KRTAP9-8Q9BYQ0 159 aa7.85□□□□□ -1.15
GABARAPL1-210ENST00000541960 MT2AP02795 61 aa7.84□□□□□ -1.15
GABARAPL1-210ENST00000541960 MT1FP04733 61 aa7.83□□□□□ -1.16
GABARAPL1-210ENST00000541960 KRTAP19-1Q8IUB9 90 aa7.78□□□□□ -1.16
GABARAPL1-210ENST00000541960 SPRR2GQ9BYE4 73 aa7.76□□□□□ -1.17
GABARAPL1-210ENST00000541960 KRTAP10-10P60014 251 aa7.75□□□□□ -1.17
GABARAPL1-210ENST00000541960 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
GABARAPL1-210ENST00000541960 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
GABARAPL1-210ENST00000541960 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
GABARAPL1-210ENST00000541960 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
GABARAPL1-210ENST00000541960 KRTAP9-3Q9BYQ3 159 aa7.54□□□□□ -1.2
GABARAPL1-210ENST00000541960 KRTAP19-8Q3LI54 63 aa7.51□□□□□ -1.21
GABARAPL1-210ENST00000541960 PLAC4Q8WY50 150 aa7.5□□□□□ -1.21
GABARAPL1-210ENST00000541960 MT1BP07438 61 aa7.46□□□□□ -1.22
GABARAPL1-210ENST00000541960 LCE2BO14633 110 aa7.33□□□□□ -1.24
GABARAPL1-210ENST00000541960 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
GABARAPL1-210ENST00000541960 TNP1P09430 55 aa7.29□□□□□ -1.24
GABARAPL1-210ENST00000541960 MT1XP80297 61 aa7.27□□□□□ -1.24
GABARAPL1-210ENST00000541960 KRTAP10-5P60370 271 aa7.27□□□□□ -1.25
GABARAPL1-210ENST00000541960 USH2AO75445 5202 aa7.23□□□□□ -1.25
GABARAPL1-210ENST00000541960 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
GABARAPL1-210ENST00000541960 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.27
GABARAPL1-210ENST00000541960 LCE3AQ5TA76 89 aa7.04□□□□□ -1.28
GABARAPL1-210ENST00000541960 KRTAP10-7P60409 375 aaPredicted RBP7.03□□□□□ -1.28
GABARAPL1-210ENST00000541960 PRO2289Q9P1D8 64 aa7.01□□□□□ -1.29
GABARAPL1-210ENST00000541960 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
GABARAPL1-210ENST00000541960 SSPOA2VEC9 5147 aa6.91□□□□□ -1.3
GABARAPL1-210ENST00000541960 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
GABARAPL1-210ENST00000541960 FSIP2Q5CZC0 6907 aa6.85□□□□□ -1.31
GABARAPL1-210ENST00000541960 KMT2DO14686 5537 aa6.84□□□□□ -1.31
GABARAPL1-210ENST00000541960 KRTAP19-6Q3LI70 58 aa6.73□□□□□ -1.33
GABARAPL1-210ENST00000541960 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
GABARAPL1-210ENST00000541960 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.33
GABARAPL1-210ENST00000541960 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.33
GABARAPL1-210ENST00000541960 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
GABARAPL1-210ENST00000541960 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
GABARAPL1-210ENST00000541960 FCGBPQ9Y6R7 5405 aaPredicted RBP6.56□□□□□ -1.36
GABARAPL1-210ENST00000541960 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
GABARAPL1-210ENST00000541960 KRTAP19-7Q3SYF9 63 aa6.5□□□□□ -1.37
GABARAPL1-210ENST00000541960 KRTAP9-2Q9BYQ4 174 aa6.38□□□□□ -1.39
GABARAPL1-210ENST00000541960 MT1EP04732 61 aa6.34□□□□□ -1.39
GABARAPL1-210ENST00000541960 LCE3CQ5T5A8 94 aa6.29□□□□□ -1.4
GABARAPL1-210ENST00000541960 MT1LQ93083 61 aa6.25□□□□□ -1.41
GABARAPL1-210ENST00000541960 MACF1Q9UPN3 7388 aaKnown RBP6.25□□□□□ -1.41
GABARAPL1-210ENST00000541960 MUC12Q9UKN1 5478 aa6.2□□□□□ -1.42
GABARAPL1-210ENST00000541960 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms