RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 J3QL48 77 aa5.35□□□□□ -1.55
CLDN2-202ENST00000540876 VPS13BQ7Z7G8 4022 aa5.34□□□□□ -1.56
CLDN2-202ENST00000540876 SMR3BP02814 79 aaPredicted RBP5.33□□□□□ -1.56
CLDN2-202ENST00000540876 DMBT1Q9UGM3 2413 aaPredicted RBP5.32□□□□□ -1.56
CLDN2-202ENST00000540876 HSPG2P98160 4391 aa5.32□□□□□ -1.56
CLDN2-202ENST00000540876 COX6B2Q6YFQ2 88 aa5.3□□□□□ -1.56
CLDN2-202ENST00000540876 RYR1P21817 5038 aa5.3□□□□□ -1.56
CLDN2-202ENST00000540876 KRTAP17-1Q9BYP8 105 aa5.27□□□□□ -1.57
CLDN2-202ENST00000540876 A0A0D9SG42 100 aa5.26□□□□□ -1.57
CLDN2-202ENST00000540876 RPL37P61927 97 aaKnown RBP5.26□□□□□ -1.57
CLDN2-202ENST00000540876 BIRC6Q9NR09 4857 aa5.23□□□□□ -1.57
CLDN2-202ENST00000540876 MYCBP2O75592 4640 aa5.2□□□□□ -1.58
CLDN2-202ENST00000540876 SEC61BP60468 96 aaKnown RBP5.2□□□□□ -1.58
CLDN2-202ENST00000540876 KRTAP3-1Q9BYR8 98 aa5.18□□□□□ -1.58
CLDN2-202ENST00000540876 LRP1Q07954 4544 aaKnown RBP5.18□□□□□ -1.58
CLDN2-202ENST00000540876 ABCA13Q86UQ4 5058 aa5.18□□□□□ -1.58
CLDN2-202ENST00000540876 KRTAP13-2Q52LG2 175 aa5.17□□□□□ -1.58
CLDN2-202ENST00000540876 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
CLDN2-202ENST00000540876 PCLOQ9Y6V0 5065 aa5.15□□□□□ -1.59
CLDN2-202ENST00000540876 Q5VSD8 79 aa5.14□□□□□ -1.59
CLDN2-202ENST00000540876 KRTAP10-4P60372 401 aaPredicted RBP5.13□□□□□ -1.59
CLDN2-202ENST00000540876 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
CLDN2-202ENST00000540876 HERC2O95714 4834 aa5.13□□□□□ -1.59
CLDN2-202ENST00000540876 PKHD1L1Q86WI1 4243 aa5.1□□□□□ -1.59
CLDN2-202ENST00000540876 KRTAP1-4P0C5Y4 121 aa5.08□□□□□ -1.6
CLDN2-202ENST00000540876 S4R3F8 94 aa5.07□□□□□ -1.6
CLDN2-202ENST00000540876 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
CLDN2-202ENST00000540876 LCE2DQ5TA82 110 aaPredicted RBP5.03□□□□□ -1.6
CLDN2-202ENST00000540876 FAT3Q8TDW7 4589 aa5.03□□□□□ -1.6
CLDN2-202ENST00000540876 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
CLDN2-202ENST00000540876 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
CLDN2-202ENST00000540876 KRTAP3-2Q9BYR7 98 aa5.02□□□□□ -1.61
CLDN2-202ENST00000540876 C9orf92A6NGG3 77 aa5.01□□□□□ -1.61
CLDN2-202ENST00000540876 TNXBP22105 4242 aa5.01□□□□□ -1.61
CLDN2-202ENST00000540876 HERC1Q15751 4861 aa4.99□□□□□ -1.61
CLDN2-202ENST00000540876 XP32Q5T750 250 aa4.97□□□□□ -1.61
CLDN2-202ENST00000540876 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
CLDN2-202ENST00000540876 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
CLDN2-202ENST00000540876 MT1HL1P0DM35 61 aa4.91□□□□□ -1.62
CLDN2-202ENST00000540876 KRTAP10-8P60410 259 aa4.89□□□□□ -1.63
CLDN2-202ENST00000540876 LPAP08519 4548 aa4.85□□□□□ -1.63
CLDN2-202ENST00000540876 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
CLDN2-202ENST00000540876 LRP2P98164 4655 aa4.79□□□□□ -1.64
CLDN2-202ENST00000540876 HMCN2Q8NDA2 5059 aa4.77□□□□□ -1.65
CLDN2-202ENST00000540876 UBR4Q5T4S7 5183 aa4.73□□□□□ -1.65
CLDN2-202ENST00000540876 MUC2Q02817 5179 aa4.73□□□□□ -1.65
CLDN2-202ENST00000540876 CAMK2N1Q7Z7J9 78 aa4.7□□□□□ -1.66
CLDN2-202ENST00000540876 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
CLDN2-202ENST00000540876 M0QZ58 72 aa4.69□□□□□ -1.66
CLDN2-202ENST00000540876 PRO2289Q9P1D8 64 aa4.58□□□□□ -1.68
CLDN2-202ENST00000540876 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
CLDN2-202ENST00000540876 R4GN34 69 aa4.54□□□□□ -1.68
CLDN2-202ENST00000540876 FAT4Q6V0I7 4981 aa4.51□□□□□ -1.69
CLDN2-202ENST00000540876 KRTAP4-1Q9BYQ7 146 aa4.47□□□□□ -1.69
CLDN2-202ENST00000540876 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
CLDN2-202ENST00000540876 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
CLDN2-202ENST00000540876 LORP23490 312 aaPredicted RBP4.37□□□□□ -1.71
CLDN2-202ENST00000540876 INE1O15225 51 aa4.36□□□□□ -1.71
CLDN2-202ENST00000540876 LCE2BO14633 110 aa4.3□□□□□ -1.72
CLDN2-202ENST00000540876 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
CLDN2-202ENST00000540876 KRTAP19-2Q3LHN2 52 aa4.26□□□□□ -1.73
CLDN2-202ENST00000540876 TNP1P09430 55 aa4.26□□□□□ -1.73
CLDN2-202ENST00000540876 LCE2CQ5TA81 110 aa4.23□□□□□ -1.73
CLDN2-202ENST00000540876 FLGP20930 4061 aaPredicted RBP4.22□□□□□ -1.73
CLDN2-202ENST00000540876 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
CLDN2-202ENST00000540876 MT1HP80294 61 aa4.16□□□□□ -1.74
CLDN2-202ENST00000540876 M0R2T5 61 aa4.15□□□□□ -1.75
CLDN2-202ENST00000540876 FSIP2Q5CZC0 6907 aa4.08□□□□□ -1.76
CLDN2-202ENST00000540876 USH2AO75445 5202 aa3.99□□□□□ -1.77
CLDN2-202ENST00000540876 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
CLDN2-202ENST00000540876 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
CLDN2-202ENST00000540876 MT2AP02795 61 aa3.95□□□□□ -1.78
CLDN2-202ENST00000540876 MT1FP04733 61 aa3.95□□□□□ -1.78
CLDN2-202ENST00000540876 KRTAP10-10P60014 251 aa3.94□□□□□ -1.78
CLDN2-202ENST00000540876 KRTAP9-3Q9BYQ3 159 aa3.83□□□□□ -1.8
CLDN2-202ENST00000540876 KRTAP19-1Q8IUB9 90 aa3.81□□□□□ -1.8
CLDN2-202ENST00000540876 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
CLDN2-202ENST00000540876 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
CLDN2-202ENST00000540876 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
CLDN2-202ENST00000540876 SPRR2GQ9BYE4 73 aa3.75□□□□□ -1.81
CLDN2-202ENST00000540876 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
CLDN2-202ENST00000540876 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
CLDN2-202ENST00000540876 MT1BP07438 61 aa3.68□□□□□ -1.82
CLDN2-202ENST00000540876 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
CLDN2-202ENST00000540876 FCGBPQ9Y6R7 5405 aaPredicted RBP3.63□□□□□ -1.83
CLDN2-202ENST00000540876 KMT2DO14686 5537 aa3.61□□□□□ -1.83
CLDN2-202ENST00000540876 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
CLDN2-202ENST00000540876 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
CLDN2-202ENST00000540876 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
CLDN2-202ENST00000540876 MT1XP80297 61 aa3.56□□□□□ -1.84
CLDN2-202ENST00000540876 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
CLDN2-202ENST00000540876 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
CLDN2-202ENST00000540876 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
CLDN2-202ENST00000540876 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
CLDN2-202ENST00000540876 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
CLDN2-202ENST00000540876 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
CLDN2-202ENST00000540876 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
CLDN2-202ENST00000540876 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
CLDN2-202ENST00000540876 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
CLDN2-202ENST00000540876 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms