RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CYP4F30PQ9H0H9 118 aa3.65□□□□□ -1.83
YBX3-209ENST00000540747 TP53AIP1Q9HCN2 124 aa3.65□□□□□ -1.83
YBX3-209ENST00000540747 C8orf17Q9NRJ1 99 aa3.65□□□□□ -1.83
YBX3-209ENST00000540747 A0A1B0GVX0 72 aa3.64□□□□□ -1.83
YBX3-209ENST00000540747 KRTAP16-1A8MUX0 517 aa3.64□□□□□ -1.83
YBX3-209ENST00000540747 Q96NJ1 140 aa3.64□□□□□ -1.83
YBX3-209ENST00000540747 IGHV6-1A0A0B4J1U7 121 aa3.63□□□□□ -1.83
YBX3-209ENST00000540747 NDUFS5O43920 106 aa3.63□□□□□ -1.83
YBX3-209ENST00000540747 SPANXA2-OT1Q8N9U9 137 aa3.63□□□□□ -1.83
YBX3-209ENST00000540747 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
YBX3-209ENST00000540747 HRES1P13985 223 aa3.61□□□□□ -1.83
YBX3-209ENST00000540747 MRPL34Q9BQ48 92 aaKnown RBP3.61□□□□□ -1.83
YBX3-209ENST00000540747 V9GYY9 64 aa3.61□□□□□ -1.83
YBX3-209ENST00000540747 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
YBX3-209ENST00000540747 Q1T7F1 81 aa3.59□□□□□ -1.83
YBX3-209ENST00000540747 NEBP20929 6669 aa3.59□□□□□ -1.84
YBX3-209ENST00000540747 C8orf87E5RJ46 101 aa3.58□□□□□ -1.84
YBX3-209ENST00000540747 PRO0628Q9UI54 55 aa3.58□□□□□ -1.84
YBX3-209ENST00000540747 NOTCH2NLQ7Z3S9 236 aa3.57□□□□□ -1.84
YBX3-209ENST00000540747 LOC101927531A0A1B0GV80 90 aa3.56□□□□□ -1.84
YBX3-209ENST00000540747 BRK1Q8WUW1 75 aa3.56□□□□□ -1.84
YBX3-209ENST00000540747 LINC00313P59037 77 aa3.55□□□□□ -1.84
YBX3-209ENST00000540747 COA5Q86WW8 74 aa3.54□□□□□ -1.84
YBX3-209ENST00000540747 RBM12B-AS1Q9P1G2 102 aa3.54□□□□□ -1.84
YBX3-209ENST00000540747 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
YBX3-209ENST00000540747 PSPHP1O15172 72 aa3.53□□□□□ -1.84
YBX3-209ENST00000540747 A8MUN3 132 aa3.51□□□□□ -1.85
YBX3-209ENST00000540747 Q8N9P0 234 aaPredicted RBP3.51□□□□□ -1.85
YBX3-209ENST00000540747 PRR15LQ9BU68 103 aa3.51□□□□□ -1.85
YBX3-209ENST00000540747 Q5W150 140 aa3.5□□□□□ -1.85
YBX3-209ENST00000540747 CHKB-CPT1BH3BT56 60 aa3.49□□□□□ -1.85
YBX3-209ENST00000540747 ACYP2P14621 99 aa3.49□□□□□ -1.85
YBX3-209ENST00000540747 Q5VV11 94 aa3.47□□□□□ -1.85
YBX3-209ENST00000540747 LINC01558Q9Y6Z2 57 aa3.47□□□□□ -1.85
YBX3-209ENST00000540747 IGKV2-30P06310 120 aa3.45□□□□□ -1.86
YBX3-209ENST00000540747 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
YBX3-209ENST00000540747 A6NED7 52 aa3.44□□□□□ -1.86
YBX3-209ENST00000540747 SPINK7P58062 85 aa3.44□□□□□ -1.86
YBX3-209ENST00000540747 KMT2DO14686 5537 aa3.43□□□□□ -1.86
YBX3-209ENST00000540747 IGKV2D-30A0A075B6S6 120 aa3.42□□□□□ -1.86
YBX3-209ENST00000540747 DMAC1Q96GE9 116 aa3.42□□□□□ -1.86
YBX3-209ENST00000540747 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
YBX3-209ENST00000540747 PMAIP1Q13794 54 aa3.39□□□□□ -1.87
YBX3-209ENST00000540747 SPTSSBQ8NFR3 76 aa3.39□□□□□ -1.87
YBX3-209ENST00000540747 C7orf65Q6ZTY9 151 aa3.38□□□□□ -1.87
YBX3-209ENST00000540747 CDC42SE1Q9NRR8 79 aa3.38□□□□□ -1.87
YBX3-209ENST00000540747 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
YBX3-209ENST00000540747 LCA10Q71F78 164 aa3.37□□□□□ -1.87
YBX3-209ENST00000540747 A0A1B0GU69 56 aa3.36□□□□□ -1.87
YBX3-209ENST00000540747 MT1BP07438 61 aa3.36□□□□□ -1.87
YBX3-209ENST00000540747 H1FX-AS1Q4G0G2 97 aa3.34□□□□□ -1.87
YBX3-209ENST00000540747 A6NN06 94 aa3.33□□□□□ -1.88
YBX3-209ENST00000540747 A8MU10 97 aa3.33□□□□□ -1.88
YBX3-209ENST00000540747 SEC61GP60059 68 aa3.33□□□□□ -1.88
YBX3-209ENST00000540747 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
YBX3-209ENST00000540747 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
YBX3-209ENST00000540747 UQCR11O14957 56 aa3.3□□□□□ -1.88
YBX3-209ENST00000540747 MIR22HGQ0VDD5 57 aa3.29□□□□□ -1.88
YBX3-209ENST00000540747 SPATA8Q6RVD6 105 aa3.29□□□□□ -1.88
YBX3-209ENST00000540747 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
YBX3-209ENST00000540747 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
YBX3-209ENST00000540747 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
YBX3-209ENST00000540747 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
YBX3-209ENST00000540747 KRTAP3-1Q9BYR8 98 aa3.21□□□□□ -1.9
YBX3-209ENST00000540747 A0A1B0GU33 70 aa3.2□□□□□ -1.9
YBX3-209ENST00000540747 K7ERS5 55 aa3.15□□□□□ -1.91
YBX3-209ENST00000540747 SPRR2EP22531 72 aa3.15□□□□□ -1.91
YBX3-209ENST00000540747 SPRR2BP35325 72 aa3.15□□□□□ -1.91
YBX3-209ENST00000540747 SPRR2AP35326 72 aa3.15□□□□□ -1.91
YBX3-209ENST00000540747 CSAG1Q6PB30 78 aa3.15□□□□□ -1.91
YBX3-209ENST00000540747 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.91
YBX3-209ENST00000540747 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
YBX3-209ENST00000540747 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.91
YBX3-209ENST00000540747 S4R3F8 94 aa3.15□□□□□ -1.91
YBX3-209ENST00000540747 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
YBX3-209ENST00000540747 KRTAP3-3Q9BYR6 98 aa3.13□□□□□ -1.91
YBX3-209ENST00000540747 PRAC1Q96KF2 57 aa3.12□□□□□ -1.91
YBX3-209ENST00000540747 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
YBX3-209ENST00000540747 H0YAA0 97 aa3.11□□□□□ -1.91
YBX3-209ENST00000540747 CRIPTQ9P021 101 aa3.11□□□□□ -1.91
YBX3-209ENST00000540747 MT1XP80297 61 aa3.1□□□□□ -1.91
YBX3-209ENST00000540747 ADM2Q7Z4H4 148 aa3.1□□□□□ -1.91
YBX3-209ENST00000540747 KRTAP12-2P59991 146 aa3.06□□□□□ -1.92
YBX3-209ENST00000540747 KRTAP8-1Q8IUC2 63 aa3.06□□□□□ -1.92
YBX3-209ENST00000540747 SPRR2DP22532 72 aa3.05□□□□□ -1.92
YBX3-209ENST00000540747 LINC01554Q52M75 96 aa3.04□□□□□ -1.92
YBX3-209ENST00000540747 A0A0D9SG42 100 aa3.03□□□□□ -1.92
YBX3-209ENST00000540747 KRTAP3-2Q9BYR7 98 aa3.03□□□□□ -1.92
YBX3-209ENST00000540747 PRO2289Q9P1D8 64 aa3.03□□□□□ -1.92
YBX3-209ENST00000540747 KRTAP4-8A0A0G2JLE6 195 aa3.01□□□□□ -1.93
YBX3-209ENST00000540747 ROMO1P60602 79 aa3.01□□□□□ -1.93
YBX3-209ENST00000540747 KRTAP4-8Q9BYQ9 185 aa3.01□□□□□ -1.93
YBX3-209ENST00000540747 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
YBX3-209ENST00000540747 P0C880 135 aa2.99□□□□□ -1.93
YBX3-209ENST00000540747 LCE3BQ5TA77 95 aa2.99□□□□□ -1.93
YBX3-209ENST00000540747 M0QZ58 72 aa2.98□□□□□ -1.93
YBX3-209ENST00000540747 KRTAP13-4Q3LI77 160 aa2.98□□□□□ -1.93
YBX3-209ENST00000540747 SPINT4Q6UDR6 99 aa2.95□□□□□ -1.94
YBX3-209ENST00000540747 KRTAP10-12P60413 245 aa2.94□□□□□ -1.94
YBX3-209ENST00000540747 PLAC4Q8WY50 150 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms