RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
CYB561A3-215ENST00000540317 SPTSSBQ8NFR3 76 aa6.25□□□□□ -1.41
CYB561A3-215ENST00000540317 Q5VV11 94 aa6.24□□□□□ -1.41
CYB561A3-215ENST00000540317 KRTAP4-1Q9BYQ7 146 aa6.23□□□□□ -1.41
CYB561A3-215ENST00000540317 COX6B2Q6YFQ2 88 aa6.22□□□□□ -1.41
CYB561A3-215ENST00000540317 FAT4Q6V0I7 4981 aa6.21□□□□□ -1.42
CYB561A3-215ENST00000540317 BRK1Q8WUW1 75 aa6.18□□□□□ -1.42
CYB561A3-215ENST00000540317 PRO0628Q9UI54 55 aa6.18□□□□□ -1.42
CYB561A3-215ENST00000540317 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
CYB561A3-215ENST00000540317 A0A1B0GU69 56 aa6.15□□□□□ -1.42
CYB561A3-215ENST00000540317 KRTAP9-2Q9BYQ4 174 aa6.14□□□□□ -1.43
CYB561A3-215ENST00000540317 A6NED7 52 aa6.13□□□□□ -1.43
CYB561A3-215ENST00000540317 SEC61GP60059 68 aa6.11□□□□□ -1.43
CYB561A3-215ENST00000540317 SVIPQ8NHG7 77 aa6.11□□□□□ -1.43
CYB561A3-215ENST00000540317 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
CYB561A3-215ENST00000540317 CDC42SE1Q9NRR8 79 aa6.06□□□□□ -1.44
CYB561A3-215ENST00000540317 RBM12B-AS1Q9P1G2 102 aa6.05□□□□□ -1.44
CYB561A3-215ENST00000540317 KRTAP19-2Q3LHN2 52 aa6.04□□□□□ -1.44
CYB561A3-215ENST00000540317 UQCR11O14957 56 aa6.02□□□□□ -1.45
CYB561A3-215ENST00000540317 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
CYB561A3-215ENST00000540317 LCA10Q71F78 164 aa6.01□□□□□ -1.45
CYB561A3-215ENST00000540317 S4R3F8 94 aa6.01□□□□□ -1.45
CYB561A3-215ENST00000540317 MT1HP80294 61 aa6□□□□□ -1.45
CYB561A3-215ENST00000540317 M0R2T5 61 aa5.97□□□□□ -1.45
CYB561A3-215ENST00000540317 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
CYB561A3-215ENST00000540317 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
CYB561A3-215ENST00000540317 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
CYB561A3-215ENST00000540317 A8MU10 97 aa5.93□□□□□ -1.46
CYB561A3-215ENST00000540317 KRTAP9-6A0A140TA67 174 aa5.93□□□□□ -1.46
CYB561A3-215ENST00000540317 LCE2DQ5TA82 110 aaPredicted RBP5.93□□□□□ -1.46
CYB561A3-215ENST00000540317 A0A1B0GU33 70 aa5.91□□□□□ -1.46
CYB561A3-215ENST00000540317 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
CYB561A3-215ENST00000540317 LORP23490 312 aaPredicted RBP5.88□□□□□ -1.47
CYB561A3-215ENST00000540317 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
CYB561A3-215ENST00000540317 CSAG1Q6PB30 78 aa5.88□□□□□ -1.47
CYB561A3-215ENST00000540317 FSIP2Q5CZC0 6907 aa5.82□□□□□ -1.48
CYB561A3-215ENST00000540317 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
CYB561A3-215ENST00000540317 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
CYB561A3-215ENST00000540317 A6NN06 94 aa5.8□□□□□ -1.48
CYB561A3-215ENST00000540317 H0YAA0 97 aa5.8□□□□□ -1.48
CYB561A3-215ENST00000540317 KRTAP3-2Q9BYR7 98 aa5.8□□□□□ -1.48
CYB561A3-215ENST00000540317 ADM2Q7Z4H4 148 aa5.75□□□□□ -1.49
CYB561A3-215ENST00000540317 K7ERS5 55 aa5.71□□□□□ -1.5
CYB561A3-215ENST00000540317 P0C880 135 aa5.71□□□□□ -1.5
CYB561A3-215ENST00000540317 KTN1-AS1Q86SY8 53 aa5.7□□□□□ -1.5
CYB561A3-215ENST00000540317 M0QZ58 72 aa5.67□□□□□ -1.5
CYB561A3-215ENST00000540317 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
CYB561A3-215ENST00000540317 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
CYB561A3-215ENST00000540317 MT2AP02795 61 aa5.59□□□□□ -1.51
CYB561A3-215ENST00000540317 A0A0D9SG42 100 aa5.58□□□□□ -1.52
CYB561A3-215ENST00000540317 KRTAP10-10P60014 251 aa5.58□□□□□ -1.52
CYB561A3-215ENST00000540317 MT1FP04733 61 aa5.55□□□□□ -1.52
CYB561A3-215ENST00000540317 R4GN34 69 aa5.55□□□□□ -1.52
CYB561A3-215ENST00000540317 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
CYB561A3-215ENST00000540317 CRIPTQ9P021 101 aa5.49□□□□□ -1.53
CYB561A3-215ENST00000540317 USH2AO75445 5202 aa5.48□□□□□ -1.53
CYB561A3-215ENST00000540317 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
CYB561A3-215ENST00000540317 LCE2BO14633 110 aa5.47□□□□□ -1.53
CYB561A3-215ENST00000540317 KRTAP12-2P59991 146 aa5.46□□□□□ -1.54
CYB561A3-215ENST00000540317 SPINT4Q6UDR6 99 aa5.46□□□□□ -1.54
CYB561A3-215ENST00000540317 ROMO1P60602 79 aa5.45□□□□□ -1.54
CYB561A3-215ENST00000540317 LINC01554Q52M75 96 aa5.42□□□□□ -1.54
CYB561A3-215ENST00000540317 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
CYB561A3-215ENST00000540317 SSPOA2VEC9 5147 aa5.41□□□□□ -1.54
CYB561A3-215ENST00000540317 KRTAP19-1Q8IUB9 90 aa5.39□□□□□ -1.55
CYB561A3-215ENST00000540317 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
CYB561A3-215ENST00000540317 FCGBPQ9Y6R7 5405 aaPredicted RBP5.35□□□□□ -1.55
CYB561A3-215ENST00000540317 KRTAP9-7A8MTY7 169 aa5.33□□□□□ -1.56
CYB561A3-215ENST00000540317 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
CYB561A3-215ENST00000540317 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
CYB561A3-215ENST00000540317 SPRR2GQ9BYE4 73 aa5.26□□□□□ -1.57
CYB561A3-215ENST00000540317 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
CYB561A3-215ENST00000540317 MACF1Q9UPN3 7388 aaKnown RBP5.17□□□□□ -1.58
CYB561A3-215ENST00000540317 PLAC4Q8WY50 150 aa5.16□□□□□ -1.58
CYB561A3-215ENST00000540317 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
CYB561A3-215ENST00000540317 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
CYB561A3-215ENST00000540317 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.59
CYB561A3-215ENST00000540317 MT1BP07438 61 aa5.08□□□□□ -1.6
CYB561A3-215ENST00000540317 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
CYB561A3-215ENST00000540317 TNP1P09430 55 aa5.03□□□□□ -1.6
CYB561A3-215ENST00000540317 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
CYB561A3-215ENST00000540317 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
CYB561A3-215ENST00000540317 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
CYB561A3-215ENST00000540317 PRO2289Q9P1D8 64 aa4.87□□□□□ -1.63
CYB561A3-215ENST00000540317 MT1XP80297 61 aa4.85□□□□□ -1.63
CYB561A3-215ENST00000540317 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
CYB561A3-215ENST00000540317 NEBP20929 6669 aa4.78□□□□□ -1.64
CYB561A3-215ENST00000540317 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
CYB561A3-215ENST00000540317 KMT2DO14686 5537 aa4.73□□□□□ -1.65
CYB561A3-215ENST00000540317 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
CYB561A3-215ENST00000540317 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
CYB561A3-215ENST00000540317 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
CYB561A3-215ENST00000540317 MDN1Q9NU22 5596 aa4.69□□□□□ -1.66
CYB561A3-215ENST00000540317 SPRR2FQ96RM1 72 aa4.68□□□□□ -1.66
CYB561A3-215ENST00000540317 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
CYB561A3-215ENST00000540317 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
CYB561A3-215ENST00000540317 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.67
CYB561A3-215ENST00000540317 SPRR2EP22531 72 aa4.61□□□□□ -1.67
CYB561A3-215ENST00000540317 SPRR2BP35325 72 aa4.61□□□□□ -1.67
CYB561A3-215ENST00000540317 SPRR2AP35326 72 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms