RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 CSAG1Q6PB30 78 aa8.75□□□□□ -1.01
NEK2-205ENST00000540251 MT2AP02795 61 aa8.73□□□□□ -1.01
NEK2-205ENST00000540251 ACYP2P14621 99 aa8.7□□□□□ -1.02
NEK2-205ENST00000540251 H7BZZ5 65 aa8.68□□□□□ -1.02
NEK2-205ENST00000540251 LCE2DQ5TA82 110 aaPredicted RBP8.67□□□□□ -1.02
NEK2-205ENST00000540251 CYSTM1Q9H1C7 97 aa8.66□□□□□ -1.02
NEK2-205ENST00000540251 MT1FP04733 61 aa8.65□□□□□ -1.02
NEK2-205ENST00000540251 CCDC179H3BU77 68 aa8.61□□□□□ -1.03
NEK2-205ENST00000540251 H0YAA0 97 aa8.58□□□□□ -1.04
NEK2-205ENST00000540251 KRTAP10-10P60014 251 aa8.58□□□□□ -1.04
NEK2-205ENST00000540251 KRTAP9-3Q9BYQ3 159 aa8.55□□□□□ -1.04
NEK2-205ENST00000540251 KRTAP9-2Q9BYQ4 174 aa8.54□□□□□ -1.04
NEK2-205ENST00000540251 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
NEK2-205ENST00000540251 CHKB-CPT1BH3BT56 60 aa8.46□□□□□ -1.06
NEK2-205ENST00000540251 ATP5EP56381 51 aaPredicted RBP8.43□□□□□ -1.06
NEK2-205ENST00000540251 COA5Q86WW8 74 aa8.43□□□□□ -1.06
NEK2-205ENST00000540251 CRIPTQ9P021 101 aa8.39□□□□□ -1.07
NEK2-205ENST00000540251 TMEM258P61165 79 aa8.38□□□□□ -1.07
NEK2-205ENST00000540251 LCE2BO14633 110 aa8.37□□□□□ -1.07
NEK2-205ENST00000540251 ADM2Q7Z4H4 148 aa8.36□□□□□ -1.07
NEK2-205ENST00000540251 KRTAP9-6A0A140TA67 174 aa8.35□□□□□ -1.07
NEK2-205ENST00000540251 KRTAP19-1Q8IUB9 90 aa8.35□□□□□ -1.07
NEK2-205ENST00000540251 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
NEK2-205ENST00000540251 SPRR2GQ9BYE4 73 aa8.34□□□□□ -1.07
NEK2-205ENST00000540251 P0C880 135 aa8.28□□□□□ -1.08
NEK2-205ENST00000540251 PCP4P48539 62 aa8.23□□□□□ -1.09
NEK2-205ENST00000540251 USH2AO75445 5202 aa8.22□□□□□ -1.09
NEK2-205ENST00000540251 KRTAP19-8Q3LI54 63 aa8.22□□□□□ -1.09
NEK2-205ENST00000540251 CRCT1Q9UGL9 99 aa8.16□□□□□ -1.1
NEK2-205ENST00000540251 R4GN34 69 aa8.13□□□□□ -1.11
NEK2-205ENST00000540251 FSIP2Q5CZC0 6907 aa8.12□□□□□ -1.11
NEK2-205ENST00000540251 SERP1Q9Y6X1 66 aa8.11□□□□□ -1.11
NEK2-205ENST00000540251 MT1BP07438 61 aa8.1□□□□□ -1.11
NEK2-205ENST00000540251 Q5VV11 94 aa8.09□□□□□ -1.11
NEK2-205ENST00000540251 M0QZ58 72 aa8.08□□□□□ -1.12
NEK2-205ENST00000540251 SEC61GP60059 68 aa8.08□□□□□ -1.12
NEK2-205ENST00000540251 SSPOA2VEC9 5147 aa8.04□□□□□ -1.12
NEK2-205ENST00000540251 KRTAP19-6Q3LI70 58 aa8.03□□□□□ -1.12
NEK2-205ENST00000540251 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
NEK2-205ENST00000540251 A0A1B0GU69 56 aa7.99□□□□□ -1.13
NEK2-205ENST00000540251 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
NEK2-205ENST00000540251 A0A1B0GU33 70 aa7.93□□□□□ -1.14
NEK2-205ENST00000540251 RPS28P62857 69 aaKnown RBP7.93□□□□□ -1.14
NEK2-205ENST00000540251 A6NN06 94 aa7.91□□□□□ -1.14
NEK2-205ENST00000540251 PRR15LQ9BU68 103 aa7.89□□□□□ -1.15
NEK2-205ENST00000540251 LINC01554Q52M75 96 aa7.85□□□□□ -1.15
NEK2-205ENST00000540251 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
NEK2-205ENST00000540251 V9GYY9 64 aa7.84□□□□□ -1.15
NEK2-205ENST00000540251 Q1T7F1 81 aa7.83□□□□□ -1.16
NEK2-205ENST00000540251 FCGBPQ9Y6R7 5405 aaPredicted RBP7.82□□□□□ -1.16
NEK2-205ENST00000540251 KRTAP10-5P60370 271 aa7.82□□□□□ -1.16
NEK2-205ENST00000540251 SMIM26A0A096LP01 95 aa7.81□□□□□ -1.16
NEK2-205ENST00000540251 SPATA8Q6RVD6 105 aa7.78□□□□□ -1.16
NEK2-205ENST00000540251 MT1XP80297 61 aa7.72□□□□□ -1.17
NEK2-205ENST00000540251 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
NEK2-205ENST00000540251 UQCR11O14957 56 aa7.68□□□□□ -1.18
NEK2-205ENST00000540251 A0A0D9SG42 100 aa7.65□□□□□ -1.18
NEK2-205ENST00000540251 KRTAP12-1P59990 96 aa7.63□□□□□ -1.19
NEK2-205ENST00000540251 PSPHP1O15172 72 aa7.61□□□□□ -1.19
NEK2-205ENST00000540251 A8MU10 97 aa7.58□□□□□ -1.2
NEK2-205ENST00000540251 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.57□□□□□ -1.2
NEK2-205ENST00000540251 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
NEK2-205ENST00000540251 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.2
NEK2-205ENST00000540251 MIR22HGQ0VDD5 57 aa7.52□□□□□ -1.21
NEK2-205ENST00000540251 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
NEK2-205ENST00000540251 KRTAP9-7A8MTY7 169 aa7.47□□□□□ -1.21
NEK2-205ENST00000540251 MACF1Q9UPN3 7388 aaKnown RBP7.44□□□□□ -1.22
NEK2-205ENST00000540251 A6NED7 52 aa7.39□□□□□ -1.23
NEK2-205ENST00000540251 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
NEK2-205ENST00000540251 KRTAP10-7P60409 375 aaPredicted RBP7.33□□□□□ -1.24
NEK2-205ENST00000540251 KRTAP6-3Q3LI67 103 aa7.29□□□□□ -1.24
NEK2-205ENST00000540251 K7ERS5 55 aa7.27□□□□□ -1.25
NEK2-205ENST00000540251 C10orf95Q9H7T3 257 aa7.25□□□□□ -1.25
NEK2-205ENST00000540251 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
NEK2-205ENST00000540251 SYNE2Q8WXH0 6885 aaKnown RBP7.24□□□□□ -1.25
NEK2-205ENST00000540251 KRTAP5-9P26371 169 aa7.21□□□□□ -1.26
NEK2-205ENST00000540251 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
NEK2-205ENST00000540251 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
NEK2-205ENST00000540251 KMT2DO14686 5537 aa7.17□□□□□ -1.26
NEK2-205ENST00000540251 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
NEK2-205ENST00000540251 TNP1P09430 55 aa7.12□□□□□ -1.27
NEK2-205ENST00000540251 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
NEK2-205ENST00000540251 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
NEK2-205ENST00000540251 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
NEK2-205ENST00000540251 MUC12Q9UKN1 5478 aa6.9□□□□□ -1.3
NEK2-205ENST00000540251 ROMO1P60602 79 aa6.89□□□□□ -1.31
NEK2-205ENST00000540251 LCE3AQ5TA76 89 aa6.89□□□□□ -1.31
NEK2-205ENST00000540251 BRK1Q8WUW1 75 aa6.89□□□□□ -1.31
NEK2-205ENST00000540251 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
NEK2-205ENST00000540251 LCE1AQ5T7P2 110 aa6.81□□□□□ -1.32
NEK2-205ENST00000540251 MT1EP04732 61 aa6.8□□□□□ -1.32
NEK2-205ENST00000540251 KRTAP19-5Q3LI72 72 aa6.8□□□□□ -1.32
NEK2-205ENST00000540251 MDN1Q9NU22 5596 aa6.8□□□□□ -1.32
NEK2-205ENST00000540251 NEBP20929 6669 aa6.77□□□□□ -1.33
NEK2-205ENST00000540251 SPRR2EP22531 72 aa6.76□□□□□ -1.33
NEK2-205ENST00000540251 SPRR2BP35325 72 aa6.76□□□□□ -1.33
NEK2-205ENST00000540251 SPRR2AP35326 72 aa6.76□□□□□ -1.33
NEK2-205ENST00000540251 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
NEK2-205ENST00000540251 PP632Q6XCG6 107 aa6.65□□□□□ -1.35
NEK2-205ENST00000540251 KRTAP19-3Q7Z4W3 81 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms