RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 A8MUN3 132 aa10.34□□□□□ -0.75
TRIM65-202ENST00000540128 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
TRIM65-202ENST00000540128 TRAV7A0A075B6U4 112 aa10.33□□□□□ -0.76
TRIM65-202ENST00000540128 LCE2BO14633 110 aa10.28□□□□□ -0.76
TRIM65-202ENST00000540128 USH2AO75445 5202 aa10.21□□□□□ -0.77
TRIM65-202ENST00000540128 NDUFC1O43677 76 aa10.18□□□□□ -0.78
TRIM65-202ENST00000540128 DMAC1Q96GE9 116 aa10.16□□□□□ -0.78
TRIM65-202ENST00000540128 SERP2Q8N6R1 65 aa10.12□□□□□ -0.79
TRIM65-202ENST00000540128 H0YAA0 97 aa10.06□□□□□ -0.8
TRIM65-202ENST00000540128 KRTAP19-1Q8IUB9 90 aa10.05□□□□□ -0.8
TRIM65-202ENST00000540128 SNURFQ9Y675 71 aa10.04□□□□□ -0.8
TRIM65-202ENST00000540128 SSPOA2VEC9 5147 aa10.04□□□□□ -0.8
TRIM65-202ENST00000540128 C20orf197Q8N268 126 aa10□□□□□ -0.81
TRIM65-202ENST00000540128 SPRR2GQ9BYE4 73 aa9.98□□□□□ -0.81
TRIM65-202ENST00000540128 ACYP2P14621 99 aa9.97□□□□□ -0.81
TRIM65-202ENST00000540128 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.96□□□□□ -0.82
TRIM65-202ENST00000540128 CRIPTQ9P021 101 aa9.95□□□□□ -0.82
TRIM65-202ENST00000540128 KRTAP9-7A8MTY7 169 aa9.94□□□□□ -0.82
TRIM65-202ENST00000540128 SPANXA2-OT1Q8N9U9 137 aa9.93□□□□□ -0.82
TRIM65-202ENST00000540128 COX7CP15954 63 aa9.9□□□□□ -0.82
TRIM65-202ENST00000540128 KRTAP19-6Q3LI70 58 aa9.89□□□□□ -0.83
TRIM65-202ENST00000540128 ADM2Q7Z4H4 148 aa9.89□□□□□ -0.83
TRIM65-202ENST00000540128 KRTAP19-8Q3LI54 63 aa9.87□□□□□ -0.83
TRIM65-202ENST00000540128 MT1BP07438 61 aa9.8□□□□□ -0.84
TRIM65-202ENST00000540128 FCGBPQ9Y6R7 5405 aaPredicted RBP9.78□□□□□ -0.84
TRIM65-202ENST00000540128 Q5VV11 94 aa9.78□□□□□ -0.84
TRIM65-202ENST00000540128 SPTSSBQ8NFR3 76 aa9.77□□□□□ -0.85
TRIM65-202ENST00000540128 KRTAP3-2Q9BYR7 98 aa9.76□□□□□ -0.85
TRIM65-202ENST00000540128 CHKB-CPT1BH3BT56 60 aa9.74□□□□□ -0.85
TRIM65-202ENST00000540128 P0C880 135 aa9.72□□□□□ -0.85
TRIM65-202ENST00000540128 ANAPC13Q9BS18 74 aa9.69□□□□□ -0.86
TRIM65-202ENST00000540128 H7BZZ5 65 aa9.68□□□□□ -0.86
TRIM65-202ENST00000540128 CYSTM1Q9H1C7 97 aa9.67□□□□□ -0.86
TRIM65-202ENST00000540128 R4GN34 69 aa9.6□□□□□ -0.87
TRIM65-202ENST00000540128 COA5Q86WW8 74 aa9.58□□□□□ -0.88
TRIM65-202ENST00000540128 M0QZ58 72 aa9.54□□□□□ -0.88
TRIM65-202ENST00000540128 MACF1Q9UPN3 7388 aaKnown RBP9.54□□□□□ -0.88
TRIM65-202ENST00000540128 A6NN06 94 aa9.51□□□□□ -0.89
TRIM65-202ENST00000540128 CCDC179H3BU77 68 aa9.5□□□□□ -0.89
TRIM65-202ENST00000540128 KRTAP10-5P60370 271 aa9.5□□□□□ -0.89
TRIM65-202ENST00000540128 SYNE2Q8WXH0 6885 aaKnown RBP9.48□□□□□ -0.89
TRIM65-202ENST00000540128 PLAC4Q8WY50 150 aa9.4□□□□□ -0.9
TRIM65-202ENST00000540128 LINC01554Q52M75 96 aa9.34□□□□□ -0.91
TRIM65-202ENST00000540128 ATP5EP56381 51 aaPredicted RBP9.3□□□□□ -0.92
TRIM65-202ENST00000540128 SEC61GP60059 68 aa9.27□□□□□ -0.93
TRIM65-202ENST00000540128 MT1XP80297 61 aa9.27□□□□□ -0.93
TRIM65-202ENST00000540128 PRO2289Q9P1D8 64 aa9.26□□□□□ -0.93
TRIM65-202ENST00000540128 SERP1Q9Y6X1 66 aa9.26□□□□□ -0.93
TRIM65-202ENST00000540128 KRTAP13-4Q3LI77 160 aa9.23□□□□□ -0.93
TRIM65-202ENST00000540128 KRTAP6-3Q3LI67 103 aa9.21□□□□□ -0.94
TRIM65-202ENST00000540128 TMEM258P61165 79 aa9.18□□□□□ -0.94
TRIM65-202ENST00000540128 A0A1B0GU33 70 aa9.11□□□□□ -0.95
TRIM65-202ENST00000540128 A0A1B0GU69 56 aa9.08□□□□□ -0.96
TRIM65-202ENST00000540128 KRTAP12-2P59991 146 aa9.01□□□□□ -0.97
TRIM65-202ENST00000540128 SPATA8Q6RVD6 105 aa9.01□□□□□ -0.97
TRIM65-202ENST00000540128 NEBP20929 6669 aa8.99□□□□□ -0.97
TRIM65-202ENST00000540128 LINC01558Q9Y6Z2 57 aa8.96□□□□□ -0.98
TRIM65-202ENST00000540128 A0A0D9SG42 100 aa8.93□□□□□ -0.98
TRIM65-202ENST00000540128 PRR15LQ9BU68 103 aa8.91□□□□□ -0.98
TRIM65-202ENST00000540128 KRTAP5-9P26371 169 aa8.9□□□□□ -0.98
TRIM65-202ENST00000540128 CAMK2N1Q7Z7J9 78 aa8.87□□□□□ -0.99
TRIM65-202ENST00000540128 SMIM26A0A096LP01 95 aa8.84□□□□□ -0.99
TRIM65-202ENST00000540128 KRTAP12-1P59990 96 aa8.83□□□□□ -1
TRIM65-202ENST00000540128 KRTAP10-7P60409 375 aaPredicted RBP8.83□□□□□ -1
TRIM65-202ENST00000540128 KRTAP10-12P60413 245 aa8.83□□□□□ -1
TRIM65-202ENST00000540128 MUC12Q9UKN1 5478 aa8.81□□□□□ -1
TRIM65-202ENST00000540128 SPINT4Q6UDR6 99 aa8.79□□□□□ -1
TRIM65-202ENST00000540128 KMT2DO14686 5537 aa8.75□□□□□ -1.01
TRIM65-202ENST00000540128 A8MU10 97 aa8.74□□□□□ -1.01
TRIM65-202ENST00000540128 KRTAP8-1Q8IUC2 63 aa8.74□□□□□ -1.01
TRIM65-202ENST00000540128 KRTAP4-8A0A0G2JLE6 195 aa8.73□□□□□ -1.01
TRIM65-202ENST00000540128 KRTAP4-8Q9BYQ9 185 aa8.73□□□□□ -1.01
TRIM65-202ENST00000540128 PCP4P48539 62 aa8.67□□□□□ -1.02
TRIM65-202ENST00000540128 KRTAP20-1Q3LI63 56 aa8.65□□□□□ -1.02
TRIM65-202ENST00000540128 UQCR11O14957 56 aa8.64□□□□□ -1.03
TRIM65-202ENST00000540128 SPRR2FQ96RM1 72 aa8.64□□□□□ -1.03
TRIM65-202ENST00000540128 V9GYY9 64 aa8.63□□□□□ -1.03
TRIM65-202ENST00000540128 Q1T7F1 81 aa8.61□□□□□ -1.03
TRIM65-202ENST00000540128 MDN1Q9NU22 5596 aa8.52□□□□□ -1.05
TRIM65-202ENST00000540128 RPS28P62857 69 aaKnown RBP8.51□□□□□ -1.05
TRIM65-202ENST00000540128 PSPHP1O15172 72 aa8.48□□□□□ -1.05
TRIM65-202ENST00000540128 MIR22HGQ0VDD5 57 aa8.47□□□□□ -1.05
TRIM65-202ENST00000540128 SPRR2EP22531 72 aa8.43□□□□□ -1.06
TRIM65-202ENST00000540128 SPRR2BP35325 72 aa8.43□□□□□ -1.06
TRIM65-202ENST00000540128 SPRR2AP35326 72 aa8.43□□□□□ -1.06
TRIM65-202ENST00000540128 LCE1AQ5T7P2 110 aa8.42□□□□□ -1.06
TRIM65-202ENST00000540128 C10orf95Q9H7T3 257 aa8.42□□□□□ -1.06
TRIM65-202ENST00000540128 KRTAP2-3P0C7H8 128 aa8.36□□□□□ -1.07
TRIM65-202ENST00000540128 KRTAP2-4Q9BYR9 128 aa8.36□□□□□ -1.07
TRIM65-202ENST00000540128 TNP1P09430 55 aa8.3□□□□□ -1.08
TRIM65-202ENST00000540128 KRTAP19-7Q3SYF9 63 aa8.29□□□□□ -1.08
TRIM65-202ENST00000540128 K7ERS5 55 aa8.22□□□□□ -1.09
TRIM65-202ENST00000540128 A6NED7 52 aa8.21□□□□□ -1.1
TRIM65-202ENST00000540128 MT1EP04732 61 aa8.19□□□□□ -1.1
TRIM65-202ENST00000540128 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.1
TRIM65-202ENST00000540128 SPRR2DP22532 72 aa8.14□□□□□ -1.11
TRIM65-202ENST00000540128 LCE3AQ5TA76 89 aa8.12□□□□□ -1.11
TRIM65-202ENST00000540128 KRTAP2-2Q9BYT5 123 aa8.06□□□□□ -1.12
TRIM65-202ENST00000540128 KRTAP2-1Q9BYU5 128 aa8.06□□□□□ -1.12
TRIM65-202ENST00000540128 KRTAP19-3Q7Z4W3 81 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms